Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3m20
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.43 
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   2.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   4.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   4.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.0  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   5.3  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   5.3  
AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive ...    23   5.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 62   ILRVVK*QLKWLTLNIKEICLARTMGLLHKIRLLTTI 172
            +LRV K    W TLN+    + RTMG L  +  +  I
Sbjct: 903  LLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCI 939


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 367 CLIGCWPCACIPYC 408
           CL  C P  C+P+C
Sbjct: 150 CLSKCSPTKCVPFC 163


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 388 MASILSNKGLTQKDESCSKHRVE 320
           MAS+  + GL Q+   C  HR++
Sbjct: 390 MASVAPSYGLPQQQNQCPIHRIQ 412


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 358 LILCLIGCWPCACI 399
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 358 LILCLIGCWPCACI 399
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 376 GCWPCACIPYCMESCQNATHY 438
           GC PC C  + +E C +A+ Y
Sbjct: 493 GCTPCFCYGHTLE-CTSASGY 512


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 RRGSSTIRDGCASATNGP 266
           +    T RDG AS+ NGP
Sbjct: 94  KANDQTARDGSASSKNGP 111


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 RRGSSTIRDGCASATNGP 266
           +    T RDG AS+ NGP
Sbjct: 94  KANDQTARDGSASSKNGP 111


>AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive
           alpha-macroglobulinand complement C3-related protein
           IMCR14 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 RRGSSTIRDGCASATNGP 266
           +    T RDG AS+ NGP
Sbjct: 23  KANDQTARDGSASSKNGP 40


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 238 TVVQARPMGPEPSSLTCPS 294
           TV+Q  P G EP + T P+
Sbjct: 360 TVLQRTPSGTEPKTPTSPT 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,703
Number of Sequences: 2352
Number of extensions: 8671
Number of successful extensions: 65
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)