Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3m03
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.6  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory
          receptor candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 15 IWSTSLRSAATLLTIANSLSRPFSK 89
          I+S  L +  TLL I +S+ RP+ K
Sbjct: 25 IYSFLLLTTLTLLVILSSIDRPYLK 49


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 662 LVGVIPLNTINMDLNSLISKFAVPRVMVTLL 570
           +VGV PLN +N +   L   F   +V+ T L
Sbjct: 37  IVGVFPLNHLNEEPEKLHFTFKSWKVLYTSL 67


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 751 FGQRPPCWGRSSTQSCCRLRIATCHC 674
           FG  P C  +   ++C  L I  C C
Sbjct: 25  FGFLPVCSSQKGQKTCLNLSINYCIC 50


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 768 NSRTSRSDSGPRV 730
           N RT RSD GP++
Sbjct: 273 NPRTYRSDEGPQI 285


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 741 RCPNERCANCANPTAL 788
           + P E CA C N T+L
Sbjct: 723 KVPGECCAICVNATSL 738


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 768 NSRTSRSDSGPRVGVDQAHNHAVDFESQHAIVLYSFS 658
           N   SR+D  P  G  +   H   F   + +  YS++
Sbjct: 61  NKNVSRADHSPVFGKVEPVPHTSSFNMGYLVSPYSYA 97


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 484 GSNKVGTNSIFLGTVYD 534
           G+N++GT  IFL   +D
Sbjct: 492 GNNRMGTCRIFLAPQFD 508


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,714
Number of Sequences: 336
Number of extensions: 4070
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)