Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3l22
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010245-1|AAQ23563.1|  297|Drosophila melanogaster RE40745p pro...    29   6.3  
AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p pro...    29   6.3  
AF212322-1|AAF24495.1|  601|Drosophila melanogaster SP71 protein.      29   6.3  
AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB, ...    29   6.3  
AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA, ...    29   6.3  
AE013599-1388|AAF58589.1|  297|Drosophila melanogaster CG8357-PA...    29   6.3  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    29   8.4  

>BT010245-1|AAQ23563.1|  297|Drosophila melanogaster RE40745p
           protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 505 FLEHFDKVHNRLAIVGNAEQRLCLFNVFETGAVYCS 398
           F+E        L    NAE RL L  + + GA++CS
Sbjct: 169 FMEQLKDAGRPLCAKRNAEDRLNLLKLLKAGAIFCS 204


>AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p
           protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 632 CRF-CKT-AEFFCRTLLYLAQPTLSGQSCSI 546
           CR  C+  +EF CR+ LYL QP  S  +C +
Sbjct: 260 CRLACEIESEFLCRSFLYLGQPQGSQYNCRL 290


>AF212322-1|AAF24495.1|  601|Drosophila melanogaster SP71 protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 632 CRF-CKT-AEFFCRTLLYLAQPTLSGQSCSI 546
           CR  C+  +EF CR+ LYL QP  S  +C +
Sbjct: 146 CRLACEIESEFLCRSFLYLGQPQGSQYNCRL 176


>AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB,
           isoform B protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 632 CRF-CKT-AEFFCRTLLYLAQPTLSGQSCSI 546
           CR  C+  +EF CR+ LYL QP  S  +C +
Sbjct: 260 CRLACEIESEFLCRSFLYLGQPQGSQYNCRL 290


>AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA,
           isoform A protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 632 CRF-CKT-AEFFCRTLLYLAQPTLSGQSCSI 546
           CR  C+  +EF CR+ LYL QP  S  +C +
Sbjct: 260 CRLACEIESEFLCRSFLYLGQPQGSQYNCRL 290


>AE013599-1388|AAF58589.1|  297|Drosophila melanogaster CG8357-PA
           protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 505 FLEHFDKVHNRLAIVGNAEQRLCLFNVFETGAVYCS 398
           F+E        L    NAE RL L  + + GA++CS
Sbjct: 169 FMEQLKDAGRPLCAKRNAEDRLNLLKLLKAGAIFCS 204


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +2

Query: 98  NGQSVPPPIKSNL---RPIACEIPLSHFKELVESNDFLLCFXLETSTMVKILSLKRI 259
           +GQ++ P + +N+   +PI+C  P SH     +++DF + F +    + +I+   +I
Sbjct: 57  DGQTMRP-VWTNICSSKPISCPFPTSHVARQPQNSDFFIKFYIYLVCITQIIFFFKI 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,951,374
Number of Sequences: 53049
Number of extensions: 696553
Number of successful extensions: 1574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)