BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3l21
(357 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 131 3e-30
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 120 7e-27
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 118 2e-26
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 110 6e-24
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 110 8e-24
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 105 2e-22
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 70 6e-20
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 97 1e-19
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma... 83 3e-17
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 76 2e-13
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 71 6e-12
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe... 69 2e-11
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae... 62 3e-09
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 60 8e-09
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 60 1e-08
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 58 3e-08
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 58 4e-08
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 57 8e-08
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa... 56 2e-07
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.029
UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3; Thermop... 35 0.36
UniRef50_A5DIT0 Cluster: Predicted protein; n=1; Pichia guillier... 32 2.5
UniRef50_Q1D8K2 Cluster: Methionyl-tRNA synthetase; n=2; Cystoba... 31 5.9
UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.9
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 131 bits (317), Expect = 3e-30
Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXX 206
MTKGTSSFGKRRNKTHTLC RCG +YH+QKS C CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 120 bits (289), Expect = 7e-27
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXX 206
M KGT SFGKRRNK+HTLC RCGR S+HIQKS+C+ C YPAA+ R+Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
MR+L+ V RRF+ F+EG + TP KA ASS
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 118 bits (285), Expect = 2e-26
Identities = 52/81 (64%), Positives = 59/81 (72%)
Frame = +3
Query: 33 KGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXX 212
KGTSSFGKR NK+HTLC RCGR S+HIQKS CA CGYP+AK+R Y+WS KA
Sbjct: 69 KGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTG 128
Query: 213 XMRHLKIVRRRFRNGFKEGKP 275
M HLK V RRF+NGF+ G P
Sbjct: 129 RMSHLKDVHRRFKNGFQVGTP 149
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 110 bits (265), Expect = 6e-24
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXX 206
M KGT SFGKR NK+HTLC RCGR S+H+QK C+ CGYP+AK RS++W+ KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEG 269
MR+LK V RRF+NGF+ G
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 110 bits (264), Expect = 8e-24
Identities = 52/92 (56%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 33 KGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXX 212
KGTSSFGKRRNK HTLC RCG +YH+QKS C C YPA R Y+W KA
Sbjct: 30 KGTSSFGKRRNKMHTLCRRCGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRRNTTGTG 89
Query: 213 XMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
MRHLKIV R R+GF+ G P P + AVA+S
Sbjct: 90 RMRHLKIVYHRCRHGFRGGTTPKPKRAAVAAS 121
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 105 bits (252), Expect = 2e-22
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXX 206
MTKGT +FGK+ K+HTLC RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEGKPTP 281
RHL+ V RFRNGF+ P P
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 70.1 bits (164), Expect(2) = 6e-20
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +3
Query: 96 RSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKP 275
R S H QK CA CGYPAAK R Y+WS KA +R+L V R+F+NGF+ G P
Sbjct: 56 RRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQTGVP 115
Query: 276 TPPKKAVAS 302
K VA+
Sbjct: 116 KGSKGPVAA 124
Score = 48.0 bits (109), Expect(2) = 6e-20
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGR 98
MTKGTSSFGKR KTH LC RCGR
Sbjct: 1 MTKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 96.7 bits (230), Expect = 1e-19
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 30 TKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYH-WSVKAXXXXXXX 206
T+GT +FGKR KTHTLC RCG+++YH QK +CA CGYP AK+R Y W K
Sbjct: 48 TRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRKGQG 107
Query: 207 XXXMRHLKIVRRRFRNGFKEG 269
MR++K + RR +NGF+ G
Sbjct: 108 TGRMRYMKTIARRAKNGFRSG 128
>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
maydis|Rep: Ribosomal protein L37 - Ustilago maydis
(Smut fungus)
Length = 125
Score = 83.0 bits (196), Expect(2) = 3e-17
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +3
Query: 66 KTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRR 245
KTHT+C RC ++H QK CA CGYPAAK+RSY W KA MR+LK V RR
Sbjct: 50 KTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRR 109
Query: 246 FRNGFKEG 269
+NGF+ G
Sbjct: 110 AKNGFQTG 117
Score = 26.2 bits (55), Expect(2) = 3e-17
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +3
Query: 27 MTKGTSSFGKRRN 65
MTKGT+SFGKR++
Sbjct: 1 MTKGTTSFGKRQD 13
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 76.2 bits (179), Expect = 2e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXX 206
M+KGT+SFGK+ + +C RCGR SYH QK+ C+ CGYP K+R+ S+KA
Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKARRRRTIG 59
Query: 207 XXXMRHLKIVRRRFRNGFKEGKP 275
MR++K R +NG K G P
Sbjct: 60 TGRMRYMKRELRAAKNGHK-GDP 81
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 70.9 bits (166), Expect = 6e-12
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCA 131
MTKGT+SFGKR NKTHT+C RCG SSYH+QKSKC+
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCS 35
>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
grisea 70-15
Length = 188
Score = 68.9 bits (161), Expect = 2e-11
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 87 RCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKE 266
+ R S H+QK CA CGYPAAK R Y+WS KA MR+L V R+F+N F+
Sbjct: 115 KMSRRSLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQT 174
Query: 267 GKP 275
G P
Sbjct: 175 GTP 177
>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
volcanium
Length = 54
Score = 62.1 bits (144), Expect = 3e-09
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNK-THTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHWS 176
M+ GT+ GK NK TH C RCG +Y+++ +C+ CG+PA ++RSY W+
Sbjct: 1 MSNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 60.5 bits (140), Expect = 8e-09
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 MTKGTSSFGKRRNK-THTLCXRCGRSSYHIQKSKCAXCGY-PAAKLRSYHWSVK 182
M GT++FGKR + TH C RCGR SY+++K CA CG+ + +LR Y WS K
Sbjct: 1 MGSGTATFGKRNSTPTHIRCRRCGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 60.1 bits (139), Expect = 1e-08
Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 36 GTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPA-AKLRSYHWSVK 182
GT S GK+ THT C RCG SYH +K C+ CG+ A AK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 58.4 bits (135), Expect = 3e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCXRCGRSSYH 110
MTKGT+SFGKR NKTHT+C RCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 MTKGTSSFGKR-RNKTHTLCXRCGRSSYHIQKSKCAXCGY 143
MTKGT SFG+ R KTH C RCGR SY+I K CA CGY
Sbjct: 1 MTKGTPSFGRMSRGKTHIRCPRCGRHSYNIVKGYCAACGY 40
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 57.2 bits (132), Expect = 8e-08
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 51 GKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAK-LRSYHWSVK 182
GK+ KTH C RCGR++YHI K CA CG+ +K +R Y W K
Sbjct: 2 GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46
>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
maripaludis
Length = 64
Score = 55.6 bits (128), Expect = 2e-07
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 MTKGTSSFGKR-RNKTHTLCXRCGRSSYHIQKSKCAXCGY-PAAKLRSYHWSVK 182
MTKGT S GK + H +C RCGR ++H++K CA CG+ ++K++ + W K
Sbjct: 1 MTKGTPSQGKHNKGSNHIVCRRCGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54
>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 89
Score = 38.7 bits (86), Expect = 0.029
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 138 GYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 299
G+ + S +WSVKA MR+++ V +RF++ F+EG P+K A
Sbjct: 33 GFNFCDVISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86
>UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3;
Thermoprotei|Rep: Methionyl-tRNA synthetase -
Cenarchaeum symbiosum
Length = 548
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 21 DKMTKGTSSFGKRRNKTHTLCXRCGRSSYHIQKSKCAXCGYPAAKLRSYHW 173
D+ +GT K + LC CGR I CA CG K S H+
Sbjct: 137 DRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRHY 187
>UniRef50_A5DIT0 Cluster: Predicted protein; n=1; Pichia
guilliermondii|Rep: Predicted protein - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 307
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 31 RRVPQASVSAEIRPIRYAXDVVDRHITFKNQNAPXVDILQQNY--DPTTGQ*RLS 189
R+ P+ ++S+ A VV +H TFKN +D L+QN+ TT + RLS
Sbjct: 131 RKPPETAMSSVNITTNTAIPVVSKHFTFKNTIRDFLDKLRQNHKSSSTTTKRRLS 185
>UniRef50_Q1D8K2 Cluster: Methionyl-tRNA synthetase; n=2;
Cystobacterineae|Rep: Methionyl-tRNA synthetase -
Myxococcus xanthus (strain DK 1622)
Length = 703
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 21 DKMTKGTSSFGKRRNKTHTLCXRCGRS--SYHIQKSKCAXCGYPAAKLRSYH 170
D+ KGT K ++ C +CG++ + ++CA CG P + S H
Sbjct: 136 DRFIKGTCPNCKASDQYGDACEKCGKAYDPTDLIDARCALCGTPPVRKHSEH 187
>UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 364
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 72 HTLCXRCGRSSYHIQKSKCAXCGYPAAK 155
H+ C C RSS +QK KC C PA++
Sbjct: 50 HSFCSHCIRSSLDVQK-KCPSCNEPASE 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,257,577
Number of Sequences: 1657284
Number of extensions: 5360833
Number of successful extensions: 11229
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11222
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -