Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3l16
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.12 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   1.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   3.4  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   5.9  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   7.8  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 398 REGSNKVDVEHIEKCL-PQLMLDFP*INKDAT 490
           R G+ + D+EHI+  L   LM  F  IN+DAT
Sbjct: 44  RPGNGRYDIEHIDPSLCTHLMYGFFGINEDAT 75


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
 Frame = +2

Query: 17  VVNE*KSERIQYLHNFVLYLLDLLYPDTIIVTLILFFNFIRTVFCFKIFRN*TT---AMA 187
           +V E K +   +  NF+ ++L  + P TIIV L        TV+ F   R   T   +  
Sbjct: 273 IVQEYKDQAAMF--NFLDFILVFVVPFTIIVVLNTITAL--TVWKFASIRRTMTIPRSYG 328

Query: 188 RNIKDNN---NIDPATLLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 358
            N++++    NI  + L  N   T+    I+    +    S+ K+    L++++ V  CL
Sbjct: 329 TNVRESRRQLNISSSQLFGN--GTVPVQQIQLYSRSRVANSQIKVT-KMLLIVSTVFVCL 385

Query: 359 VTETCLRAVKQAQREGSNKVDVEHIEKC 442
              + +  VK         +++  ++ C
Sbjct: 386 NLPSYIVRVKIYLETEHTNMNIYLVQNC 413


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 462 SSISWGKHFSICSTSTLLEPSLCACLTARRH 370
           + +SW  H   C+T  L       CL  R H
Sbjct: 760 NQLSWKSHVEYCTTKALRTAKALGCL-MRNH 789


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 456 CWTSLKLIKMLQMEK 500
           CWT LKL K    EK
Sbjct: 281 CWTDLKLPKFFVREK 295


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 92  PDTIIVTLILFFNFIRTVFCFKIFRN 169
           P+T +   IL F      +  K+FRN
Sbjct: 657 PNTALFCTILMFGTFSLAYYLKLFRN 682


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,459
Number of Sequences: 2352
Number of extensions: 9295
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)