Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3l12
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep: CG86... 155 7e-37
UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic... 154 2e-36
UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep: CG1088... 129 5e-29
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto... 116 4e-25
UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella ve... 80 5e-14
UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma j... 78 2e-13
UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation facto... 72 1e-11
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation facto... 65 1e-09
UniRef50_P78795 Cluster: Probable eukaryotic translation initiat... 60 5e-08
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat... 60 6e-08
UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of s... 57 3e-07
UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole geno... 56 8e-07
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 52 9e-06
UniRef50_Q04067 Cluster: Eukaryotic translation initiation facto... 49 1e-04
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus... 47 3e-04
UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_Q0HEX3 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.1
UniRef50_Q21275 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_A2Q6D4 Cluster: RNA-directed DNA polymerase; n=2; Medic... 35 2.0
UniRef50_UPI00015B51E2 Cluster: PREDICTED: similar to GA17772-PA... 34 2.6
UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacet... 34 3.5
UniRef50_Q6AVY2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q4QFQ1 Cluster: Putative uncharacterized protein; n=3; ... 33 4.6
UniRef50_A0BPD6 Cluster: Chromosome undetermined scaffold_12, wh... 33 4.6
UniRef50_UPI00006CF237 Cluster: hypothetical protein TTHERM_0005... 33 6.1
UniRef50_Q10YS3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A7RKM5 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.0
>UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep:
CG8636-PA - Drosophila melanogaster (Fruit fly)
Length = 269
Score = 155 bits (377), Expect = 7e-37
Identities = 68/110 (61%), Positives = 87/110 (79%)
Frame = +1
Query: 295 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 474
MP E ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1 MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60
Query: 475 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPD 624
V K++AKR+TW+KFGDS +DKPGPN TT V+E++ MQF+ SKE+ + D
Sbjct: 61 VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKAND 110
>UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 4; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 4 - Nasonia
vitripennis
Length = 293
Score = 154 bits (374), Expect = 2e-36
Identities = 73/115 (63%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
Frame = +1
Query: 310 EFQASWADEVEIDQG--VLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSK 483
E +SWADEVE D+G LPPPS + EN KI+TEYK + DNKKVK+VRTY++EKR VSK
Sbjct: 7 EVSSSWADEVE-DEGNITLPPPSIIYENDFKIMTEYKLNEDNKKVKVVRTYRVEKRTVSK 65
Query: 484 SIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELXGLK 648
SIA RK W+KFGDS +D PGPNPATT +AEDVFMQF++ KEE + ++ L LK
Sbjct: 66 SIAVRKNWAKFGDSTNDGPGPNPATTVIAEDVFMQFLSGKEEDNKVEEDALDKLK 120
>UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep:
CG10881-PA - Drosophila melanogaster (Fruit fly)
Length = 273
Score = 129 bits (312), Expect = 5e-29
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +1
Query: 313 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 489
F SWADEV+ D LPP +E ++ K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4 FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63
Query: 490 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
A+R+ W KFGDS SDKPGPN TT +E++FMQFI SK+ Q
Sbjct: 64 ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ 105
>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 4 - Homo sapiens (Human)
Length = 320
Score = 116 bits (280), Expect = 4e-25
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +1
Query: 358 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 537
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 538 PGPNPATTNVAEDVFMQFITSKEE 609
PGPN ATT V++DV M FITSKE+
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKED 136
>UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 168
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +1
Query: 439 KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQR 618
+I+ TY++E R V+K IAKRK W KFGDS +DKPGPN TTNV +DVF+ ++KE
Sbjct: 26 EIITTYRVETRRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDA 85
Query: 619 PDDGELXGL 645
++ L L
Sbjct: 86 TEEDPLKKL 94
>UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06618 protein - Schistosoma
japonicum (Blood fluke)
Length = 281
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +1
Query: 319 ASWADEVEIDQGVLPPPSEVV--ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIA 492
ASW D++ D LPP E E +K V Y Y++D +K + Y+ EKRVV+ +A
Sbjct: 3 ASWTDDLNEDSE-LPPVEEKFDPERNIKTVIRYFYNDDGDLIKETKEYQKEKRVVASRVA 61
Query: 493 KRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
RK W KFG S SD PG N A T A+ V MQ + +++ Q
Sbjct: 62 DRKKWRKFGASKSDPPGGNLANTYPADIVTMQIVQARQPEQ 102
>UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation factor 3
subunit-like protein; n=12; Magnoliophyta|Rep:
Eukaryotic translation initiation factor 3 subunit-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 308
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +1
Query: 331 DEVEIDQGVLPPPSEVV---ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 501
DE E D L PP +++ +NG+K V EYK++ ++KKVKI T +++KR ++K +R+
Sbjct: 18 DEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRALTKQAVERR 77
Query: 502 TWSKFGDSASDKPGPNPATTNVAEDVFMQFI 594
+W+KFGD+A ++ + T ED+ ++ I
Sbjct: 78 SWNKFGDAAHEE-SSSYLTMRSTEDIILERI 107
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = +1
Query: 322 SWADEV-EIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYK--IEKRVVSKSI 489
+WADE E G P E E NG+K+V EY+ + D KK+KI R K + K V+ +
Sbjct: 19 NWADEFDEPVVGDAPRIEERDEGNGVKVVIEYRTNPDGKKIKITRRVKRTLVKTKVNHEV 78
Query: 490 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
A+RKTW+KFG GP+ ATT + E+V ++ + ++
Sbjct: 79 AERKTWTKFGQEKGKAAGPHSATTTIGENVVLKMSAGNKTAE 120
>UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative; n=1; Filobasidiella
neoformans|Rep: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 290
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Frame = +1
Query: 295 MPVAEEFQASWA-DEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYK--I 462
M +++ WA D+V+ D+ LPP +E + NG+ + +KY+ D++KVK+ R + +
Sbjct: 1 MADSKQSNRDWAADDVDADE--LPPTTESTDANGITTIVSWKYNADDQKVKVTRRVRRRL 58
Query: 463 EKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELXG 642
+ V++++A+RK W KFG PGP+ TT + E++ + I + QR +
Sbjct: 59 QVSTVTQTMAERKQWPKFGLDKGKPPGPDRKTTIIGENLHFK-IAPISKIQRVEPEPETA 117
Query: 643 LKPPS 657
+K P+
Sbjct: 118 VKAPT 122
>UniRef50_P78795 Cluster: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit; n=1; Schizosaccharomyces
pombe|Rep: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 282
Score = 60.1 bits (139), Expect = 5e-08
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Frame = +1
Query: 325 WADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYK---IEKRVVSKSI 489
WAD+ + G+ P + +N G K + E++ D++ KKVK+ R + I +RV ++
Sbjct: 9 WADDEDYGTGL--PSIQTFDNPDGTKTMIEFRIDDNGKKVKVTRVIRKTVITERV-QHAV 65
Query: 490 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQ----FITSKEESQRPDDGELXGLK 648
A+RK W KFG A G + TT+V E+V ++ + T+KEE Q D+ L K
Sbjct: 66 AERKKWKKFGKEAGKNSGVDARTTSVGENVQLRLQLGWTTTKEEEQ--DEAALAAAK 120
>UniRef50_Q19706 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 4; n=2; Caenorhabditis|Rep: Probable
eukaryotic translation initiation factor 3 subunit 4 -
Caenorhabditis elegans
Length = 256
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +1
Query: 322 SWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 501
SWA+ VE D P + +G + T + + D + K+V +K+ + V K +A RK
Sbjct: 9 SWAEAVEQDNA---PHIQEGADGTRTETAFT-EVDGVRWKVVTQFKVINKRVPKVVADRK 64
Query: 502 TWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
W KFG + GP ATT VAE+V MQF ++ Q
Sbjct: 65 KWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQ 102
>UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=6;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 276
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +1
Query: 322 SWADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYKIEK--RVVSKSI 489
SWAD + +P P E+ N G K V Y+ + + +KVKI + K K V I
Sbjct: 8 SWADA----EDEIPTP-EITTNPDGTKTVVSYRLNANGQKVKITQKIKEVKVKEKVHPLI 62
Query: 490 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDD 627
A+RK W+K+G + PGP+ TT + E V ++ TS +E ++ ++
Sbjct: 63 AQRKNWAKYGKEKNTPPGPDTRTTQLGEKVELKLGTSWKEIEKQEE 108
>UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 293
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +1
Query: 331 DEVEIDQGVLPPPSEVV--ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV---VSKSIAK 495
D+ E +LPPP + +NG+K V EYK+++D KVKI T ++ K +SK +
Sbjct: 20 DDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFNDDGDKVKITTTTRVRKLANARLSKRAVE 79
Query: 496 RKTWSKFGDSASDKPG 543
R++W KFGD+ + G
Sbjct: 80 RRSWPKFGDAIHEDVG 95
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 52.4 bits (120), Expect = 9e-06
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 304 AEEFQASWADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVK---IVRTYKIEK 468
+E+F+ + DE D P ++ +N G K + ++ D D KK K ++ + +
Sbjct: 11 SEDFRQNTMDEKWADDDEFSTP-QITQNADGTKTIVTHRMD-DGKKYKRSVTIKNQSVTE 68
Query: 469 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAED-VFMQFITSKEESQRPDDGELXGL 645
+V++ +A+R W+K+G PGPN TT + ED VF+ + S + + ++ E
Sbjct: 69 KVLN-CVAERSKWTKYGKELGAPPGPNRMTTTIGEDIVFVLGLKSDQPEEEVEEEEAAAA 127
Query: 646 KP 651
P
Sbjct: 128 AP 129
>UniRef50_Q04067 Cluster: Eukaryotic translation initiation factor 3
RNA-binding subunit; n=6; Saccharomycetales|Rep:
Eukaryotic translation initiation factor 3 RNA-binding
subunit - Saccharomyces cerevisiae (Baker's yeast)
Length = 274
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +1
Query: 367 PSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYKIEKRV--VSKSIAKRKTWSKFGDSASD 534
P E++EN G + + YK + D K KI + K K + V KS+A+RK W K+G
Sbjct: 6 PEEIIENADGSRSIITYKIE-DGVKYKITQKVKEVKVLEKVHKSVAERKNWHKYGSEKGS 64
Query: 535 KPGPNPATTNVAEDVFMQFITSKEESQ 615
GP+ T + E+V ++ + ++++
Sbjct: 65 PAGPSAVTARLGEEVELRLSRNWKQAE 91
>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
tauri
Length = 311
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +1
Query: 382 ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSK---SIAKRKTWSKFGDSASDKPGPNP 552
E G+ Y+ ++ + K V+ YK E VV K + +RKTW KFGD+ KPG
Sbjct: 64 EEGVMTSITYQINDAGVRTKTVKRYK-EHEVVKKVTPGMLERKTWEKFGDAKRYKPGDES 122
Query: 553 ATTNVAEDVFMQ--FITSKEESQRPDD 627
T E++F++ + K E ++ D
Sbjct: 123 MTAVSLEEIFLEKTRVQPKSELEKASD 149
>UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 131
Score = 41.5 bits (93), Expect = 0.017
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Frame = +1
Query: 370 SEVVE--NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKS---IAKRKTWSKFGDSASD 534
SEV+ +G K + Y + N++ KI + +K E V+ + + RK W+K+G A+
Sbjct: 7 SEVITAADGTKTLITYVIEG-NERYKISQNFK-EINVLERVDPVVDARKKWAKYGAEANS 64
Query: 535 KPGPNPATTNVAEDVFMQFITSKEESQRPDDGELXGLK 648
PGP TTN E+V FI SK + + E LK
Sbjct: 65 PPGPGYDTTNPGENV--TFILSKNWRELTEIEEANRLK 100
>UniRef50_Q0HEX3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Shewanella sp. MR-4|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 717
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 277 HLHSR*MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTY 456
HL R + F ++ +EI + +EV+ +G K +TE Y N N+ +KI
Sbjct: 476 HLSDRGSQILNTFSKTYNIPIEIIKKHQSYKAEVIADGYKFLTELSYHNKNELIKIKTPK 535
Query: 457 KIEKRVVSKSIAK 495
K + ++++ I K
Sbjct: 536 KHQLELLTEFIKK 548
>UniRef50_Q21275 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 493
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 328 ADEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT 504
AD I +GV P E+ + NGL V E Y+ND +K +T + +V S K K
Sbjct: 321 ADASIILKGVHPKAPEIFQSNGLDSVIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKR 380
Query: 505 WSKFGDSASD 534
+ D SD
Sbjct: 381 QEESDDEESD 390
>UniRef50_A2Q6D4 Cluster: RNA-directed DNA polymerase; n=2; Medicago
truncatula|Rep: RNA-directed DNA polymerase - Medicago
truncatula (Barrel medic)
Length = 528
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 313 ILQQQASSGCANGF--AYSICEPEVRQGDPLSPML 215
ILQ S C NG Y C VRQGDPLSP+L
Sbjct: 295 ILQSAKLSICINGSQQGYFSCSRGVRQGDPLSPLL 329
>UniRef50_UPI00015B51E2 Cluster: PREDICTED: similar to GA17772-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA17772-PA - Nasonia vitripennis
Length = 169
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/92 (29%), Positives = 43/92 (46%)
Frame = +1
Query: 340 EIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFG 519
EI V S+ EN + +TE + KK+K V+ K EK+ K K+K S
Sbjct: 46 EIVLDVSSTSSDSDENYITPLTELREKELKKKLKEVKKKKKEKKKKRKKKHKKKESSDSS 105
Query: 520 DSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
DS SD + + ++ ED + K++S+
Sbjct: 106 DSESDNDSSSDSESDSDEDHKKKHKKKKKKSK 137
>UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacetone
kinase, YLOV ortholog; n=6; Clostridium|Rep: Predicted
kinase related to hydroxyacetone kinase, YLOV ortholog -
Clostridium acetobutylicum
Length = 547
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 319 ASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEK 468
A+ A E+ D+ V+ P++ + G+ +TE++YD D +K K T IEK
Sbjct: 394 ANQASELS-DKNVVVIPTKTIPQGITCMTEFEYDGDVEKNKEKLTKAIEK 442
>UniRef50_Q6AVY2 Cluster: Putative uncharacterized protein; n=1;
Solanum demissum|Rep: Putative uncharacterized protein -
Solanum demissum (Wild potato)
Length = 210
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 286 CANGFAYSICEPEVRQGDPLSPML 215
C GF+ ++ E VRQGDPL+PML
Sbjct: 85 CMMGFSAAVGEQGVRQGDPLTPML 108
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3
Query: 277 GFAYSICEPEVRQGDPLSPML 215
GF+ ++ E VRQGDPLSPML
Sbjct: 130 GFSAAVGEQGVRQGDPLSPML 150
>UniRef50_Q4QFQ1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 577
Score = 33.5 bits (73), Expect = 4.6
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +1
Query: 295 MPVAEEFQASWADEVEIDQGV--LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEK 468
+P EE+ A A+EVE+ + V L ++ E +V + ++ ++ Y EK
Sbjct: 439 VPKIEEYMAQKAEEVELQKAVKNLERKVQIAEGQAAVVRQQSRRLQAQRASAIK-YANEK 497
Query: 469 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRP 621
+ S R T S G +AS +P A + MQ +E+ Q+P
Sbjct: 498 HLSRNSTTSRATASA-GATASSRP-----AAGSARGLLMQRRQQREQEQQP 542
>UniRef50_A0BPD6 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 659
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 343 IDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 474
+DQ +LP +VV+ K+ E ++ N N+K + RT KIE+ +
Sbjct: 485 VDQQILPQFKQVVQQLSKLKREIEHLNQNEKHYLERTSKIEQEI 528
>UniRef50_UPI00006CF237 Cluster: hypothetical protein
TTHERM_00053780; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00053780 - Tetrahymena
thermophila SB210
Length = 281
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 418 DNDNKKVKIVRTYKIEKRV--VSKSIAKRKTWSKFGDSASDKP 540
D N KI T K+EKR+ + K+ RK KFGD SD P
Sbjct: 39 DGANPNQKIRETVKVEKRIFPIKKAAIARKNMKKFGD-VSDVP 80
>UniRef50_Q10YS3 Cluster: Putative uncharacterized protein; n=1;
Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein - Trichodesmium erythraeum
(strain IMS101)
Length = 241
Score = 33.1 bits (72), Expect = 6.1
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 340 EIDQGVLPPPSEVV-ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT-WSK 513
E Q P EV N KIV E K D +++KVKI+ IEK +++++I K+ WS
Sbjct: 12 EYSQLSKPSDCEVCGANNFKIVEEKK-DLESEKVKILIPSFIEKTILNENIVKQSVYWSP 70
Query: 514 FGDSASDKPG 543
A K G
Sbjct: 71 ISRFARFKDG 80
>UniRef50_A7RKM5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1320
Score = 32.7 bits (71), Expect = 8.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -3
Query: 427 YHCHIYIP*QFLVHFQPLQKVVEVXLGQSRPH-QPRKPEILQQQASSGCANGFAYSICEP 251
YH H Y +F V + K +V S P KP+I++ + CA+ FA S+ +P
Sbjct: 900 YHPHSY---EFHVKRKVFGKGPDVNEVDSDDETSPMKPQIIRTNFAEWCASYFAQSVMKP 956
Query: 250 EVRQGDPLSPM-LLRFWR 200
+ DP S + L R WR
Sbjct: 957 P-EEHDPQSQLHLQREWR 973
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,118,661
Number of Sequences: 1657284
Number of extensions: 9752607
Number of successful extensions: 30725
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30701
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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