Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3l12
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.1  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    24   3.7  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    24   3.7  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 392  SPFSTTSEGGGSTPWSISTSSAQE 321
            S FST+S G GS   S S SSA +
Sbjct: 1346 SKFSTSSRGSGSDSGSHSISSAAQ 1369


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 295 MPVAEEFQASWADEVEIDQGVLPPPSE 375
           +P+AE F     DEVE+  G   P  E
Sbjct: 107 VPLAEGFIQQCFDEVELTDGAFVPSDE 133


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 295 MPVAEEFQASWADEVEIDQGVLPPPSE 375
           +P+AE F     DEVE+  G   P  E
Sbjct: 121 VPLAEGFIQQCFDEVELTDGAFVPSDE 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,987
Number of Sequences: 2352
Number of extensions: 9904
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)