Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3l12
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...   155   4e-38
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...   155   4e-38
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...   129   3e-30
AY089620-1|AAL90358.1|  237|Drosophila melanogaster RE35371p pro...    29   5.6  
AE014296-1838|AAF50144.1|  237|Drosophila melanogaster CG14153-P...    29   5.6  
AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA...    29   7.4  

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score =  155 bits (377), Expect = 4e-38
 Identities = 68/110 (61%), Positives = 87/110 (79%)
 Frame = +1

Query: 295 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 474
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 475 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPD 624
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ +  D
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKAND 110


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score =  155 bits (377), Expect = 4e-38
 Identities = 68/110 (61%), Positives = 87/110 (79%)
 Frame = +1

Query: 295 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 474
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 475 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPD 624
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ +  D
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKAND 110


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score =  129 bits (312), Expect = 3e-30
 Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
 Frame = +1

Query: 313 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 489
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63

Query: 490 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
           A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q
Sbjct: 64  ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ 105


>AY089620-1|AAL90358.1|  237|Drosophila melanogaster RE35371p
           protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 195 NVLQNRSNIGDKGSPWRTSGSQIEYANPFAQPL 293
           N   N+ N  +   PWR    Q +YA  FA+ L
Sbjct: 185 NTYNNKENFYEPAQPWRRRDYQAKYAQHFAEYL 217


>AE014296-1838|AAF50144.1|  237|Drosophila melanogaster CG14153-PA
           protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 195 NVLQNRSNIGDKGSPWRTSGSQIEYANPFAQPL 293
           N   N+ N  +   PWR    Q +YA  FA+ L
Sbjct: 185 NTYNNKENFYEPAQPWRRRDYQAKYAQHFAEYL 217


>AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA
           protein.
          Length = 1802

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = +1

Query: 256 RKLSMRTHLHSR*MPVAEEFQAS--WADEVEID---QGVLPPPSEVVENGLKIVTEYKYD 420
           R  +  T  +S  +P     ++S    D V +D     +LPPPSE  +N  + V EY YD
Sbjct: 318 RACTSHTDFYSNSLPRRHITESSELMTDSVPLDFSQSHLLPPPSEYCKNDDEDVEEY-YD 376

Query: 421 NDNKKVKIVRTYKIE 465
            D        +Y  E
Sbjct: 377 EDEDHPHETESYSSE 391


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,525,520
Number of Sequences: 53049
Number of extensions: 479309
Number of successful extensions: 1832
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)