Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3l12
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.045
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 5.1
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 5.1
Z81475-6|CAB03913.2| 132|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 27 8.9
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +1
Query: 322 SWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 501
SWA+ VE D P + +G + T + + D + K+V +K+ + V K +A RK
Sbjct: 9 SWAEAVEQDNA---PHIQEGADGTRTETAFT-EVDGVRWKVVTQFKVINKRVPKVVADRK 64
Query: 502 TWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 615
W KFG + GP ATT VAE+V MQF ++ Q
Sbjct: 65 KWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQ 102
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 328 ADEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT 504
AD I +GV P E+ + NGL V E Y+ND +K +T + +V S K K
Sbjct: 321 ADASIILKGVHPKAPEIFQSNGLDSVIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKR 380
Query: 505 WSKFGDSASD 534
+ D SD
Sbjct: 381 QEESDDEESD 390
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 445 VRTYKIEKRVVSKSIAKRKTWSKFGDSASDKP----GPNPATTNVAE 573
+ YKI +S + KRKT KFGD A D P NP TT+ E
Sbjct: 6 ISQYKINISSLSSPL-KRKTTRKFGDDAYDSPKYFMEGNPTTTSTFE 51
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 331 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTY-KIEKRVVSKSIAKRKTW 507
D V+ID+ + +E+V+ +IVT++ + +V I+ Y K+ ++ K IA R+ W
Sbjct: 90 DLVDIDEIIPKTKTEIVDEKEQIVTDF----ERYRVLIINDYKKVSEKHYLKKIADREFW 145
>Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical
protein F02E9.3 protein.
Length = 319
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 331 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWS 510
D + + PPS LK + K D +K+ K + K KR+ S++I K WS
Sbjct: 47 DSLRSSKSSSSPPSRNSSLNLKTL---KKDRKSKEGKPKSSSKHGKRMTSRAIHVSKKWS 103
Query: 511 KFGDSASDKPGPNPATTNVAEDV 579
+F + T + ED+
Sbjct: 104 QFNRREDKTDYLDDETMQILEDL 126
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 373 EVVENGLKIVTEYKYDNDNKKVKIV 447
+ V+ K+V +YKY NDN +V I+
Sbjct: 394 QYVDFAKKLVAQYKYGNDNTRVGII 418
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 373 EVVENGLKIVTEYKYDNDNKKVKIV 447
+ V+ K+V +YKY NDN +V I+
Sbjct: 407 QYVDFAKKLVAQYKYGNDNTRVGII 431
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 331 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAK----- 495
DEVE+ + V+N KIV + K++ + + +R K+E ++ K IAK
Sbjct: 331 DEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSESQ-MRRKKVEIMLIRKEIAKAQKQL 389
Query: 496 RKTWSKFG 519
R+ KFG
Sbjct: 390 REALGKFG 397
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 382 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 549
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 550 PATTNVAEDVFMQFITSKEESQRPDD 627
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 382 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 549
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 550 PATTNVAEDVFMQFITSKEESQRPDD 627
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
>Z81475-6|CAB03913.2| 132|Caenorhabditis elegans Hypothetical
protein C24H11.6 protein.
Length = 132
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 285 VQMGSHTQFANPKSAKEILCXRCCCGSGERFSS 187
VQ+G NP+ KE+LC R G+ +S
Sbjct: 31 VQVGDIVGCVNPQKPKELLCKRIAAKEGDPVTS 63
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +1
Query: 418 DNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFIT 597
+ +N+ + + +K+ V K+ K K + +++PGP P + E ++ +
Sbjct: 1421 EEENRMKERFTKREAKKKAVEKAKEKEKKEHRKEPKKANEPGPAPKSEKAVEKA-VEKVE 1479
Query: 598 SKEESQRPDDGELXGLKPP 654
K +S + + KPP
Sbjct: 1480 KKPKSPQKPPAKPTAQKPP 1498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,072,444
Number of Sequences: 27780
Number of extensions: 243784
Number of successful extensions: 788
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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