Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3l05
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.47 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 361 VKWDSFKCNTHSFK-YRYVHNDTNAKFYNVIDFCKGLEI 474
           V WD  + NTH +K  ++V  D+     N +++ K L +
Sbjct: 313 VVWDDTQKNTHMYKGDQWVAFDSPKAISNKVEYAKSLNL 351


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 434 FAFVSLCTYLYLKLCVLHLNESHLTMC 354
           +AF+    +L L +C+ +    HL  C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFC 269


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 66  WTRSRCSIGRTWTGIFFVTLTNKYAHRTAI 155
           WTR+   I +   G F+ +LTN +    A+
Sbjct: 286 WTRNADDISQEEYGEFYKSLTNDWEDHLAV 315


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 557 PNAISTRWAHC 589
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 557 PNAISTRWAHC 589
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 519 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 385
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 353 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 397


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 519 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 385
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 78  NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 122


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 21  ERPYVCTFRICKIQTWTRS 77
           ERP+VC +  C  + +TRS
Sbjct: 342 ERPFVCNWLFCG-KRFTRS 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,262
Number of Sequences: 336
Number of extensions: 3315
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)