Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3k13
         (185 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   3.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   3.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    19   4.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    19   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   6.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    18   8.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    18   8.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 63  YSFCNKFLCL 34
           +SF ++FLCL
Sbjct: 73  FSFMSRFLCL 82


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 63 YSFCNKFLCL 34
          +SF ++FLCL
Sbjct: 29 FSFMSRFLCL 38


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -3

Query: 81  YDCNVVYSFCN 49
           Y C + Y  CN
Sbjct: 152 YKCGIQYHICN 162


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -3

Query: 81  YDCNVVYSFCN 49
           Y C + Y  CN
Sbjct: 148 YKCGIQYHICN 158


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 41  KNLLQNEYTTLQSY 82
           KNLL+N Y     Y
Sbjct: 397 KNLLENHYEEFVRY 410


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 81  YDCNVVYSF 55
           Y+C V++SF
Sbjct: 237 YNCEVLFSF 245


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 60  SFCNKFLCLIN 28
           +FCNK   L+N
Sbjct: 225 TFCNKIKHLVN 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,913
Number of Sequences: 336
Number of extensions: 354
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 41
effective length of database: 108,809
effective search space used:  2176180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)