Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3k11
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    28   0.23 
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    25   1.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   5.0  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   6.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.5  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   6.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   6.5  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 210 AIGNILFISGLTCV-IGIQRTFFFFFQRH-KLKASVAFFSGITIVLLGWPMIGMIAEMYG 383
           A G  ++IS LT   I I R F   +  H ++K S      ITI++L W    M+   YG
Sbjct: 174 AQGCSVYISTLTLTSIAIDRFFVIIYPFHPRMKLSTC----ITIIVLIWSFAIMVTMPYG 229

Query: 384 FLLLFRG 404
             +   G
Sbjct: 230 LYMKLHG 236


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 332 YSTARMAHDRDDSRDVRLLAVVQRFP 409
           YS A     R+D++DV + ++V  FP
Sbjct: 126 YSLAVAVQHREDTKDVNIPSIVSLFP 151


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -2

Query: 633 LTRTQSSIFNI--LNTI*SFSFIYTKKNVSMLAFGTRIIPCSDHCFPLSYR 487
           L R ++++ ++    ++ S +F  T+++ +     TR   CSD+   L+YR
Sbjct: 13  LDRPKTTVLHLRTYTSLQSIAFFSTRRSSAHCTQQTRQASCSDNAAQLTYR 63


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 199 LSNNRSTPRNRNVIPKPA 146
           L    STP NRN  P+PA
Sbjct: 116 LLQTASTPHNRNSDPRPA 133


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 404 TSEQQQEAVHLGYHPDHGPSEQYYSDP 324
           T EQ      +G    +GP+++YY+DP
Sbjct: 644 TGEQLDRIELVGGGRLNGPADRYYTDP 670


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/39 (25%), Positives = 25/39 (64%)
 Frame = +3

Query: 315 FFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFL 431
           + SG+ + ++   +IG++  ++  ++L R  + S+IN+L
Sbjct: 84  WISGVVMNIVA--LIGILGNIFSMVILSRPQMRSSINYL 120


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 210  AIGNILFISGLTCVIGIQRTFFFFFQRHKLK 302
            +I +ILF   L  +IG++++  + F + +LK
Sbjct: 1004 SITSILFPLMLVVMIGVRKSLDYIFTKRELK 1034


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 247  HVRPLMNRILPMARRPLSNNRSTPRNRNVIPKPA 146
            H R L + +  +   P+ + RSTPR      +PA
Sbjct: 1343 HHRLLSSNVRSLGNSPVHSGRSTPRELLESSQPA 1376


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 332 YSTARMAHDRDDSRDVRLLAVVQRFP 409
           Y+ A     RDD+RDV + + ++ FP
Sbjct: 127 YALAIALIHRDDTRDVEIPSFLELFP 152


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 398 EQQQEAVHLGYHPDHGPSEQYYSDP 324
           +QQQ+  H  + P     +QY+S P
Sbjct: 306 QQQQQHHHHQHQPQQQHQQQYHSHP 330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,733
Number of Sequences: 2352
Number of extensions: 13865
Number of successful extensions: 75
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)