Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3k11
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    26   0.28 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.37 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    26   0.37 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.37 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 315 RRRTPSACAVGRRRKTSSGCRSRMSD 238
           +RR+ S C++G    TSS   SR SD
Sbjct: 169 KRRSVSECSLGTASSTSSTASSRNSD 194


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 469 GRFSSDPKTGTILKKLMAEG----RKPLNNSKKPYI 374
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 250 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 285


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 469 GRFSSDPKTGTILKKLMAEG----RKPLNNSKKPYI 374
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 165 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 200


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 469 GRFSSDPKTGTILKKLMAEG----RKPLNNSKKPYI 374
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 484 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 519


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 526 DSSAECEHRDIFLCINKTKTLNSV 597
           D++   +   IF CI K KT+N +
Sbjct: 109 DTNVHLKITKIFQCITKFKTINDI 132


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -3

Query: 416  RRQETSEQQQEAVHLGYHPDHGPSEQYYSDPTEE 315
            ++Q+  +QQQ+   L ++PD       Y+ PT++
Sbjct: 1453 QQQQQQQQQQQQQQLNHYPD---LHNLYAVPTDK 1483


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 338 YYSDPTEEGDGRLQLVPLEE 279
           +Y  P+ +GDG+  L+P  E
Sbjct: 173 FYIYPSLQGDGKFHLLPTGE 192


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 338 YYSDPTEEGDGRLQLVPLEE 279
           +Y  P+ +GDG+  L+P  E
Sbjct: 173 FYIYPSLQGDGKFHLLPTGE 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,870
Number of Sequences: 438
Number of extensions: 4449
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)