Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3k06
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.          25   3.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.6  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    23   7.6  

>X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.
          Length = 131

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 588 LMALLINSPVRSANPSM*SKCNTIV--ITVLFLSLSASGMLQLLP 460
           L  +L+  P  S++P +  KC TIV  I V+  +   +G +Q  P
Sbjct: 12  LKLVLLCLPRASSSPQLIMKCATIVCTIAVVLAATLLNGSVQAAP 56


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 268 DWSNSRETLLLRARELFS 321
           +WSNSRE L +   EL S
Sbjct: 262 EWSNSRELLAVAGTELGS 279


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 716 CVLYSFCEPIPYLYQIALNT 657
           CVL+  C+P+  +Y   +NT
Sbjct: 41  CVLFRECQPLVDIYNKPVNT 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,087
Number of Sequences: 2352
Number of extensions: 11240
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)