Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3k06
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ448818-1|ABE01846.1| 298|Drosophila melanogaster Trax protein. 91 2e-18
AY047514-1|AAK77246.1| 258|Drosophila melanogaster GH01922p pro... 91 2e-18
AE014297-2027|AAF55183.2| 258|Drosophila melanogaster CG5063-PA... 91 2e-18
AE014297-2026|AAN13659.1| 292|Drosophila melanogaster CG5063-PB... 91 2e-18
AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p pro... 44 2e-04
AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-P... 44 2e-04
>DQ448818-1|ABE01846.1| 298|Drosophila melanogaster Trax protein.
Length = 298
Score = 90.6 bits (215), Expect = 2e-18
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +3
Query: 180 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 356
AA L DSPI+ F+ + +L + DRHER+VKLSRDITIESKRIIFLLHS + +++
Sbjct: 21 AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80
Query: 357 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAAFQK 485
KV+EEA++R KLI ++V LEL + Y + + Q+
Sbjct: 81 KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQE 123
Score = 75.4 bits (177), Expect = 8e-14
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 473 SIPEAESDKKRTVITMVLHLDYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLY 652
+I + ES KK V +Y+LGL+DLTGELMRR INS+ +GD+ C C+ +++ Y
Sbjct: 179 AIAQVESPKKFQFF--VDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFY 236
Query: 653 TGYLGL-FGIGKELARKMNTTRSNVAKVESAVY 748
+GY+ L +EL RK+ T + +V K E+ Y
Sbjct: 237 SGYISLNCQRARELWRKITTMKQSVLKAENVCY 269
>AY047514-1|AAK77246.1| 258|Drosophila melanogaster GH01922p
protein.
Length = 258
Score = 90.6 bits (215), Expect = 2e-18
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +3
Query: 180 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 356
AA L DSPI+ F+ + +L + DRHER+VKLSRDITIESKRIIFLLHS + +++
Sbjct: 21 AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80
Query: 357 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAAFQK 485
KV+EEA++R KLI ++V LEL + Y + + Q+
Sbjct: 81 KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQE 123
Score = 58.8 bits (136), Expect = 7e-09
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 473 SIPEAESDKKRTVITMVLHLDYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLY 652
+I + ES KK V +Y+LGL+DLTGELMRR INS+ +GD+ C C+ +++ Y
Sbjct: 179 AIAQVESPKKFQFF--VDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFY 236
Query: 653 TG 658
+G
Sbjct: 237 SG 238
>AE014297-2027|AAF55183.2| 258|Drosophila melanogaster CG5063-PA,
isoform A protein.
Length = 258
Score = 90.6 bits (215), Expect = 2e-18
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +3
Query: 180 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 356
AA L DSPI+ F+ + +L + DRHER+VKLSRDITIESKRIIFLLHS + +++
Sbjct: 21 AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80
Query: 357 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAAFQK 485
KV+EEA++R KLI ++V LEL + Y + + Q+
Sbjct: 81 KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQE 123
Score = 58.8 bits (136), Expect = 7e-09
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 473 SIPEAESDKKRTVITMVLHLDYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLY 652
+I + ES KK V +Y+LGL+DLTGELMRR INS+ +GD+ C C+ +++ Y
Sbjct: 179 AIAQVESPKKFQFF--VDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFY 236
Query: 653 TG 658
+G
Sbjct: 237 SG 238
>AE014297-2026|AAN13659.1| 292|Drosophila melanogaster CG5063-PB,
isoform B protein.
Length = 292
Score = 90.6 bits (215), Expect = 2e-18
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +3
Query: 180 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 356
AA L DSPI+ F+ + +L + DRHER+VKLSRDITIESKRIIFLLHS + +++
Sbjct: 21 AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80
Query: 357 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAAFQK 485
KV+EEA++R KLI ++V LEL + Y + + Q+
Sbjct: 81 KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQE 123
Score = 68.5 bits (160), Expect = 9e-12
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +2
Query: 473 SIPEAESDKKRTVITMVLHLDYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLY 652
+I + ES KK V +Y+LGL+DLTGELMRR INS+ +GD+ C C+ +++ Y
Sbjct: 179 AIAQVESPKKFQFF--VDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFY 236
Query: 653 TGYLGLFGIGKELARKMNTTRSNVAKVESAVY 748
+G +EL RK+ T + +V K E+ Y
Sbjct: 237 SGLR-----ARELWRKITTMKQSVLKAENVCY 263
>AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p
protein.
Length = 235
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 533 DYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLYTGYLGLFGIGKELARKMNTT 712
DY+LG+ L EL R A NS++ GD + + + +L TG+ L L ++ +
Sbjct: 140 DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDAL 199
Query: 713 RSNVAKVESAVY 748
+ +V K+E VY
Sbjct: 200 KYDVKKIEEVVY 211
>AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-PA
protein.
Length = 235
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 533 DYMLGLADLTGELMRRAINSISNGDSKECFHACQVVRNLYTGYLGLFGIGKELARKMNTT 712
DY+LG+ L EL R A NS++ GD + + + +L TG+ L L ++ +
Sbjct: 140 DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDAL 199
Query: 713 RSNVAKVESAVY 748
+ +V K+E VY
Sbjct: 200 KYDVKKIEEVVY 211
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,319,966
Number of Sequences: 53049
Number of extensions: 502215
Number of successful extensions: 1109
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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