Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3k03
(621 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 26 1.1
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 25 1.5
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 25 1.5
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 25 1.5
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 25 1.5
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 25 1.5
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 1.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.6
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 3.4
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 24 4.5
AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11 prot... 23 5.9
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 5.9
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 7.8
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 285 DSMPVPWLYVDTTKANRLAK 344
D +P W Y+ T K NRL K
Sbjct: 245 DVLPSVWKYISTPKFNRLMK 264
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 467
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 467
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 467
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 467
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 467
C G C SF G F Q ALCS+ EDC +H
Sbjct: 618 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 657
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 25.0 bits (52), Expect = 1.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 152 QGRGHQHSPYM*RSTEMPLPVFPS*G 75
Q GH HS +S +P+PVF G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.6 bits (51), Expect = 2.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 295 GMLSAPRTCRRKPSTHPSRD---SGTPAV*TSSSLRIGMDFTLN 173
GML P + PS++PS D SG + +SSS + +N
Sbjct: 864 GMLKMPPSSNSSPSSYPSPDVVISGLASNNSSSSNLVAAGMVIN 907
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 181 TLNFCLSSLDRGEDINTRL 125
T+NFCL L + DI RL
Sbjct: 319 TMNFCLYELAKNPDIQGRL 337
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 23.8 bits (49), Expect = 4.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 181 TLNFCLSSLDRGEDINTRL 125
T+NFCL L + DI RL
Sbjct: 320 TMNFCLYELAKHPDIQERL 338
>AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11
protein.
Length = 100
Score = 23.4 bits (48), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 218 LNFIVFANRHGFYIEFLS*FLRQGRGHQHSPY 123
L ++FA R+ F + S +++GR H PY
Sbjct: 30 LTRLLFAGRNPFGSDLASLNIQRGRDHALRPY 61
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.4 bits (48), Expect = 5.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 412 CNSICRHSPFKVCDCQVE 465
C ++C F CDC++E
Sbjct: 740 CFALCHCCDFYACDCKME 757
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.0 bits (47), Expect = 7.8
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -3
Query: 397 SLNPLNVYNKLFTIHLHHFANLLAFVVSTYNHGTGMLSAPRTCRRKPSTH 248
SLN L I L F++ V +N +PRTC R H
Sbjct: 106 SLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGEELH 155
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,623
Number of Sequences: 2352
Number of extensions: 15650
Number of successful extensions: 40
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -