Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3k03
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 130 3e-30
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 130 3e-30
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 130 3e-30
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 130 3e-30
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 130 3e-30
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 130 3e-30
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 128 2e-29
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 4.3
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 4.3
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 101 bits (241), Expect = 3e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 101 bits (241), Expect = 3e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 101 bits (241), Expect = 3e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 100 bits (240), Expect = 4e-21
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 100 bits (240), Expect = 4e-21
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 130 bits (315), Expect = 3e-30
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+KGKY
Sbjct: 117 KILERKAKSR--QVGKEKGKY 135
Score = 101 bits (241), Expect = 3e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 128 bits (309), Expect = 2e-29
Identities = 58/81 (71%), Positives = 71/81 (87%)
Frame = +2
Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 485 AILDRRAKGRLAALGKDKGKY 547
IL+R+AK R +GK+K KY
Sbjct: 117 KILERKAKSR--QVGKEKSKY 135
Score = 101 bits (241), Expect = 3e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQ
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQ 56
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.7 bits (66), Expect = 4.3
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 316 STYNHG-TGMLSAPRTCRRKPSTHPSRDSGTPAV*TSSSLRIG----MDFTLNFCLSSLD 152
S Y +G T S T ST R SGTP+ +S ++ + FTLNF +++L
Sbjct: 12343 SLYVNGFTHQSSVSTTSTPGTSTVDLRTSGTPSSLSSPTIMAAGPLLVPFTLNFTITNLQ 12402
Query: 151 RGEDI 137
GED+
Sbjct: 12403 YGEDM 12407
Score = 30.3 bits (65), Expect = 5.7
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -3
Query: 316 STYNHG-TGMLSAPRTCRRKPSTHPSRDSGTPAV*TS--SSLRIGMDFTLNFCLSSLDRG 146
S Y +G T SAP T ST SGTP+ S S+ + + FTLNF +++L
Sbjct: 12968 SLYVNGFTHQTSAPNTSTPGTSTVDLGTSGTPSSLPSPTSAGPLLVPFTLNFTITNLQYE 13027
Query: 145 EDIN 134
ED++
Sbjct: 13028 EDMH 13031
Score = 29.9 bits (64), Expect = 7.6
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -3
Query: 316 STYNHG-TGMLSAPRTCRRKPSTHPSRDSGTPAV*TS--SSLRIGMDFTLNFCLSSLDRG 146
S Y +G T SAP T ST SGTP+ S S+ + + FTLNF +++L
Sbjct: 12812 SLYVNGFTHQTSAPNTSTPGTSTVDLGTSGTPSSLPSPTSAGPLLVPFTLNFTITNLQYE 12871
Query: 145 EDI 137
ED+
Sbjct: 12872 EDM 12874
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 30.7 bits (66), Expect = 4.3
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 316 STYNHG-TGMLSAPRTCRRKPSTHPSRDSGTPAV*TSSSLRIG----MDFTLNFCLSSLD 152
S Y +G T S T ST R SGTP+ +S ++ + FTLNF +++L
Sbjct: 4047 SLYVNGFTHQSSVSTTSTPGTSTVDLRTSGTPSSLSSPTIMAAGPLLVPFTLNFTITNLQ 4106
Query: 151 RGEDI 137
GED+
Sbjct: 4107 YGEDM 4111
Score = 30.3 bits (65), Expect = 5.7
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -3
Query: 316 STYNHG-TGMLSAPRTCRRKPSTHPSRDSGTPAV*TS--SSLRIGMDFTLNFCLSSLDRG 146
S Y +G T SAP T ST SGTP+ S S+ + + FTLNF +++L
Sbjct: 4518 SLYVNGFTHQTSAPNTSTPGTSTVDLGTSGTPSSLPSPTSAGPLLVPFTLNFTITNLQYE 4577
Query: 145 EDIN 134
ED++
Sbjct: 4578 EDMH 4581
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,189,320
Number of Sequences: 237096
Number of extensions: 2102732
Number of successful extensions: 5523
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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