Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3k03
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   142   3e-34
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   142   3e-34
BT014649-1|AAT27273.1| 1254|Drosophila melanogaster RE21490p pro...    30   2.9  
AE014298-1702|AAF48104.2| 1219|Drosophila melanogaster CG1886-PA...    30   2.9  
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny...    29   5.1  
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA...    29   5.1  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  142 bits (345), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 73/81 (90%)
 Frame = +2

Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
           V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRK
Sbjct: 57  VIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRK 116

Query: 485 AILDRRAKGRLAALGKDKGKY 547
           AIL+RR KGRLAALGKDKGKY
Sbjct: 117 AILERRGKGRLAALGKDKGKY 137



 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQ
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQ 56


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  142 bits (345), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 73/81 (90%)
 Frame = +2

Query: 305 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 484
           V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRK
Sbjct: 57  VIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRK 116

Query: 485 AILDRRAKGRLAALGKDKGKY 547
           AIL+RR KGRLAALGKDKGKY
Sbjct: 117 AILERRGKGRLAALGKDKGKY 137



 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 218
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQ
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQ 56


>BT014649-1|AAT27273.1| 1254|Drosophila melanogaster RE21490p
           protein.
          Length = 1254

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 291 CCLRPGLVEENLQLILRATAVHLLSELH 208
           CCL PGL  ENL + L +T V      H
Sbjct: 406 CCLVPGLSMENLVMFLLSTPVQFFGGFH 433


>AE014298-1702|AAF48104.2| 1219|Drosophila melanogaster CG1886-PA
           protein.
          Length = 1219

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 291 CCLRPGLVEENLQLILRATAVHLLSELH 208
           CCL PGL  ENL + L +T V      H
Sbjct: 406 CCLVPGLSMENLVMFLLSTPVQFFGGFH 433


>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
           cyclase protein.
          Length = 2248

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 544 FTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL-*RVNADICCCTIGL 401
           FT++ ++CS   L   + + F  F  L  DNH L  ++  D   C  GL
Sbjct: 284 FTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGL 332


>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
           protein.
          Length = 2248

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 544 FTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL-*RVNADICCCTIGL 401
           FT++ ++CS   L   + + F  F  L  DNH L  ++  D   C  GL
Sbjct: 284 FTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGL 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,647,813
Number of Sequences: 53049
Number of extensions: 670890
Number of successful extensions: 1626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)