Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3j18
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-P...    29   4.4  
X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless prot...    29   7.7  
X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless prot...    29   7.7  
AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-P...    29   7.7  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   7.7  

>AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-PA
           protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 13  HGRNCAFSRFCRFGHSLLGRCFL 81
           H RNCA+  +C  G  L+ RC L
Sbjct: 164 HPRNCAYFYYCSSGSKLVHRCHL 186


>X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless protein
           protein.
          Length = 2510

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 503 GGLALMHQATLPCDLGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 640
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 331 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 377


>X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless protein
           protein.
          Length = 2554

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 503 GGLALMHQATLPCDLGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 640
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 375 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-PA
           protein.
          Length = 2554

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 503 GGLALMHQATLPCDLGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 640
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 375 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 496 YYWRSRPYAS-SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP 627
           Y    +P+ S  H P      QP HQ P    QP    HP P  P
Sbjct: 9   YQTHHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPPPPPP 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,101,018
Number of Sequences: 53049
Number of extensions: 626646
Number of successful extensions: 2651
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2648
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)