Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3j03
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.4  
AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    23   9.6  
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    23   9.6  
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    23   9.6  
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    23   9.6  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    23   9.6  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    23   9.6  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    23   9.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.6  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 660 LLEHCRCYLNFDNGGAFCLICS 725
           +LE CR Y+N     AFCL  S
Sbjct: 898 VLEICRIYVNLCECDAFCLAVS 919


>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 346 AVCRKCKTPTPQDVSWHSSVD 408
           A+CR  + PTP+++  + + D
Sbjct: 129 ALCRYAEKPTPRELGTYQATD 149


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 346 AVCRKCKTPTPQDVSWHSSVD 408
           A+CR  + PTP+++  + + D
Sbjct: 129 ALCRYAEKPTPRELGTYQATD 149


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 346 AVCRKCKTPTPQDVSWHSSVD 408
           A+CR  + PTP+++  + + D
Sbjct: 129 ALCRYAEKPTPRELGTYQAAD 149


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 346 AVCRKCKTPTPQDVSWHSSVD 408
           A+CR  + PTP+++  + + D
Sbjct: 129 ALCRYAEKPTPRELGTYQATD 149


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -2

Query: 375 RRCLALSTHSTIATMIIATNS*IKNSSGHDSVDENVRACIFYIDVPSLF 229
           R  ++ + H  +      TN     SS H S+D  ++  + Y D+ + F
Sbjct: 28  RNYISPNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAF 76


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -2

Query: 375 RRCLALSTHSTIATMIIATNS*IKNSSGHDSVDENVRACIFYIDVPSLF 229
           R  ++ + H  +      TN     SS H S+D  ++  + Y D+ + F
Sbjct: 28  RNYISPNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAF 76


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -2

Query: 375 RRCLALSTHSTIATMIIATNS*IKNSSGHDSVDENVRACIFYIDVPSLF 229
           R  ++ + H  +      TN     SS H S+D  ++  + Y D+ + F
Sbjct: 28  RNYISPNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAF 76


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 580 VPWNSVIQIGGCV*QCWSADGRRDEQDYWSIAGAI 684
           VP     QIGG V     A  RR E+DY     A+
Sbjct: 94  VPGIVAAQIGGIVFISCYARPRRPEEDYEGFLAAV 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,920
Number of Sequences: 2352
Number of extensions: 16599
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)