Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i24
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   109   4e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   103   4e-23
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    30   0.54 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    29   0.71 
L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    27   3.8  
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    27   3.8  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  109 bits (263), Expect = 4e-25
 Identities = 46/87 (52%), Positives = 58/87 (66%)
 Frame = +2

Query: 32  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPAAKLRSYHWSVKAXXXXXXX 211
           MTKGT +FGK+  K+HTLC+RCG+SS+HI K  CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 212 XXXMRHLKIVRRRFRNGFKEGKPTPPK 292
               RHL+ V  RFRNGF+EG    P+
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  103 bits (247), Expect = 4e-23
 Identities = 44/85 (51%), Positives = 55/85 (64%)
 Frame = +2

Query: 32  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPAAKLRSYHWSVKAXXXXXXX 211
           MTKGT +FGK+  K+HTLC+RCG+SS+HI K  CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 212 XXXMRHLKIVRRRFRNGFKEGKPTP 286
               RHL+ V  RFRNGF+   P P
Sbjct: 61  TGRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 50  SFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPAA 157
           ++ K    TH  C +CG+ + +  K  C  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQNSKK--CKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 0.71
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 50  SFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPAA 157
           ++ K    TH  C +CG+ + +  K  C  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQNSKK--CKYCGGPVA 198


>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +2

Query: 5   LFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPA 154
           ++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 31  VYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +2

Query: 5   LFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIXKSXCAQCGYPA 154
           ++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 38  VYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,668,968
Number of Sequences: 27780
Number of extensions: 134913
Number of successful extensions: 242
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)