Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i20
         (183 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    22   3.0  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    21   6.9  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    21   6.9  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    21   6.9  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    20   9.1  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    20   9.1  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    20   9.1  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    20   9.1  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
 Frame = -2

Query: 170 PC---WGRSSTQSCCRLRIATC 114
           PC   W R S+  C   R A+C
Sbjct: 65  PCSSIWSRPSSMRCAPARTASC 86


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 92  YEFSYSVHDEHTGDIKSQHETRHG 115


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 92  YEFSYSVHDEHTGDIKSQHETRHG 115


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 92  YEFSYSVHDEHTGDIKSQHETRHG 115


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 116 YEFSYSVHDEHTGDIKSQHETRHG 139


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 92  YEFSYSVHDEHTGDIKSQHETRHG 115


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKSQHETRHG 107


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 92  YEFSYSVHDEHTGDIKSQHETRHG 115


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 129 SNRNMPLSXT 100
           SN NMPLS T
Sbjct: 90  SNENMPLSKT 99


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 158 RSSTQSCCRLRIATC 114
           R    SC   RIATC
Sbjct: 108 RYQIMSCAEKRIATC 122


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 158 RSSTQSCCRLRIATC 114
           R    SC   RIATC
Sbjct: 108 RYQIMSCAEKRIATC 122


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  YTFEYNKHGFKFLDIKVCGAARHG 14
           Y F Y+ H     DIK     RHG
Sbjct: 84  YEFSYSVHDEHTGDIKNQHETRHG 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,224
Number of Sequences: 2352
Number of extensions: 3160
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 39
effective length of database: 472,251
effective search space used:  9917271
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)