Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i20
         (183 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB, ...    27   4.6  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    26   6.1  

>AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB,
           isoform B protein.
          Length = 577

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 79  FEYNKHGFKFLDIKVCGAARHG-HIT 5
           +EYNKH +   D KV  + R G HI+
Sbjct: 32  YEYNKHVYDLFDAKVPSSQRSGFHIS 57


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -2

Query: 170   PCWGRSSTQSCCRLR--IATCHCPXQ 99
             PC G   + + C +   IA CHCP +
Sbjct: 17062 PCPGTCGSNAICEVHRHIAMCHCPPE 17087


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,471,787
Number of Sequences: 53049
Number of extensions: 134652
Number of successful extensions: 261
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 24,988,368
effective HSP length: 41
effective length of database: 22,813,359
effective search space used: 433453821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)