Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i16
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    24   3.7  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    24   5.0  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.7  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.7  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 388 VLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIA-NEER 507
           +LKI+K +  ++S D  + G DT+    T + + +A N E+
Sbjct: 307 LLKINKHVAVIMSLDMLIAGIDTTSSGSTGVLYCLAKNPEK 347


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 348 FSNFQFKLFFREKLIFGSFKGM*T 277
           +SN QF     +KL+FG  KG+ T
Sbjct: 29  WSNRQFPTLPNQKLLFGHVKGVNT 52


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 229 LTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKADV 369
           + RP + +  RK  ++ LHA   P Y   T   +     +A  K D+
Sbjct: 360 MKRPPYIENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAPSKEDL 406


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 229 LTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKADV 369
           + RP + +  RK  ++ LHA   P Y   T   +     +A  K D+
Sbjct: 360 MKRPPYIENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAPSKEDL 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,480
Number of Sequences: 2352
Number of extensions: 14696
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)