Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i14
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    28   0.36 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.5  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   7.7  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   7.7  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   7.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.7  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
 Frame = +2

Query: 146 GFYGPERHSIRH----EASRCWSYFRPPKPDSVCHHHSPDRERLC 268
           G + PE +S       E + C   F P K   VCH H P   R C
Sbjct: 240 GLFLPELYSYDEQSCIECAECRGLFSPQK--FVCHQHEPQEIRTC 282


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 518  DCCPSHSNSVFPDLSREDD 462
            DCCP +    FP L+ +DD
Sbjct: 1266 DCCPDNCYKKFPVLAGDDD 1284


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 8    ASANHQASSLHIFKSTYDMRGVVEFFGISPFERNRV-RGPFWEFDR 142
            AS  H    L  ++   +M   + ++G  P+ERN   +   W FD+
Sbjct: 1316 ASGRHPIVDLGPYRLVDEM---ISYYGFEPYERNHFGKEKKWTFDK 1358


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 17  NHQASSLHIFKSTYD 61
           NH+ASS H+ +ST D
Sbjct: 369 NHRASSPHLHQSTID 383


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -2

Query: 568 ATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSSRWSTVF 422
           A  T   +     T L  A + T TV     P+K    WN  S  + +F
Sbjct: 147 AWVTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIF 195


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -2

Query: 568 ATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSSRWSTVF 422
           A  T   +     T L  A + T TV     P+K    WN  S  + +F
Sbjct: 147 AWVTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIF 195


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 348 VKDLLEYPTDRLASDATTTVLSED 419
           VK + EYP   +A+D+T  +LS +
Sbjct: 833 VKFISEYPRTLVANDSTNDLLSHN 856


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,305
Number of Sequences: 2352
Number of extensions: 18452
Number of successful extensions: 76
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)