Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3i14
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein... 33 0.42
BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p pro... 33 0.42
BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p pro... 33 0.42
AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein. 33 0.42
AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein. 33 0.42
AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein. 33 0.42
AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein. 33 0.42
AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein. 33 0.42
AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger re... 33 0.42
AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger re... 33 0.42
AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger re... 33 0.42
AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger re... 33 0.42
AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger re... 33 0.42
AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger re... 33 0.42
AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA ... 33 0.42
AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein. 32 0.74
AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger re... 32 0.74
AY071754-1|AAL49376.1| 195|Drosophila melanogaster RH61722p pro... 32 0.74
AE014298-471|AAF45831.1| 195|Drosophila melanogaster CG14419-PA... 32 0.74
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA... 31 1.3
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 30 3.0
AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein. 30 3.9
AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein. 30 3.9
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein. 29 5.2
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 29 5.2
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 29 5.2
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 29 5.2
AY071597-1|AAL49219.1| 456|Drosophila melanogaster RE65108p pro... 29 5.2
AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p pro... 29 5.2
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 29 5.2
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 29 5.2
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 29 5.2
AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-P... 29 5.2
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 29 5.2
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 29 5.2
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 29 5.2
AE014134-1158|AAF52433.1| 456|Drosophila melanogaster CG11221-P... 29 5.2
BT009996-1|AAQ22465.1| 1483|Drosophila melanogaster RE35509p pro... 29 9.1
AY129431-1|AAM76173.1| 1006|Drosophila melanogaster GM03621p pro... 29 9.1
AY118983-1|AAM50843.1| 872|Drosophila melanogaster LP02069p pro... 29 9.1
AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-P... 29 9.1
AE014297-1400|AAS65141.1| 1477|Drosophila melanogaster CG31368-P... 29 9.1
AE014297-1399|AAF54713.3| 1480|Drosophila melanogaster CG31368-P... 29 9.1
>U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein
precursor protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p
protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 110 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 168
>BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p
protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 304 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 362
>AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 446
>AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 446
>AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 446
>AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 446
>AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 446
>AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger
receptor protein CIprecursor protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA
protein.
Length = 629
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T + P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 503
>AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 445 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 503
>AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 616 STFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
+T +P S TTT+ + S STT T+ PT T + F K T P+S
Sbjct: 388 TTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 446
>AY071754-1|AAL49376.1| 195|Drosophila melanogaster RH61722p
protein.
Length = 195
Score = 32.3 bits (70), Expect = 0.74
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -2
Query: 643 PLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKM 464
P T S +T+T +P S T TTT S ++T T T + + T P
Sbjct: 29 PSTTTSTTTTTTTPKPKESSTTTTTTTTTTEKPKSESTTASTTTTSTTPSTTTSTTP-ST 87
Query: 463 TPMWNPSSRWSTVFMSSLST 404
TP PS+ ST ++ +T
Sbjct: 88 TPSTTPSTTPSTTTTTTTTT 107
>AE014298-471|AAF45831.1| 195|Drosophila melanogaster CG14419-PA
protein.
Length = 195
Score = 32.3 bits (70), Expect = 0.74
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -2
Query: 643 PLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKM 464
P T S +T+T +P S T TTT S ++T T T + + T P
Sbjct: 29 PSTTTSTTTTTTTPKPKESSTTTTTTTTTTEKPKSESTTASTTTTSTTPSTTTSTTP-ST 87
Query: 463 TPMWNPSSRWSTVFMSSLST 404
TP PS+ ST ++ +T
Sbjct: 88 TPSTTPSTTPSTTTTTTTTT 107
>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
protein.
Length = 4010
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +3
Query: 255 VNDYVTDLQGLLINIQK*TMDINIASVLEVFVKDLLEYPTDRLASDATTTVLSEDM 422
+ D+ +QG+L+++ + T D+N S+ ++V ++L DRL DA + L E++
Sbjct: 2148 LRDFSRVIQGVLLSVPEATEDVN--SMRRLWVHEVLRVYGDRLVEDADRSWLFENI 2201
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S S STT T+ PT T + F K T P+S
Sbjct: 460 TTTSTTPKSTTSTTSTTSTTSTTPTTTTTINVFTTKKTTTMIPTS 504
Score = 29.5 bits (63), Expect = 5.2
Identities = 28/100 (28%), Positives = 46/100 (46%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P T
Sbjct: 414 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPKSTTS 471
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+ +S ST ++ +T+ V + + + + S KT+
Sbjct: 472 TTSTTSTTSTT-PTTTTTINVFTTKKTTTMIPTSSTEKTT 510
>AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S STT T+ PT T + F K T + P+S
Sbjct: 461 TTTSTTPKSXXXTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 505
>AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S STT T+ PT T + F K T + P+S
Sbjct: 461 TTTSTTPKSXXXTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTS 505
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 416 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 473
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 474 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 512
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 416 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 473
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 474 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 512
>AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPKSTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
>AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPKSTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 416 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 473
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 474 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 512
>AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPKSTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
>AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT S S TT T+ PT T + F K T + P+S
Sbjct: 462 TTTSTTPKSTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 506
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 405 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 449
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 359 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 416
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 417 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 455
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 461 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 505
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 415 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 472
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 473 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 511
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 574 TGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSS 440
T +TT ++ S TT T+ PT T + F K T + P+S
Sbjct: 461 TTTSTTPMTTTSTTFTTSTTSTRPTTTTTINVFTTKKTTIMIPTS 505
Score = 28.7 bits (61), Expect = 9.1
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T ++ STST ++ + T ATTT + + TT T PT T S T P+ T
Sbjct: 415 TTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTS--TTPMTTTS 472
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRSVGYSSKSFTKTS 338
+S ST ++ +T+ V + + ++ + S KT+
Sbjct: 473 TTFTTSTTST-RPTTTTTINVFTTKKTTIMIPTSSTEKTT 511
>AY071597-1|AAL49219.1| 456|Drosophila melanogaster RE65108p
protein.
Length = 456
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 644 SIDRCIFFYIYLPESAFASFLGSYGSHDNGCVLLVHSVYHALDCCPSHSNSVFPDLSRED 465
++D +F + P AS +G G H+N C L+ + AL S N V DL E+
Sbjct: 168 TMDYYVFAMEHAPYGDLASNIGPNGLHENACKLISEQLSSALGFMHS-KNLVHRDLKIEN 226
>AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p
protein.
Length = 1139
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 113 LDFSQTEKFQRIQLLR 66
LDF QTEKFQRI+ LR
Sbjct: 125 LDFRQTEKFQRIRKLR 140
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-PA
protein.
Length = 1139
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 113 LDFSQTEKFQRIQLLR 66
LDF QTEKFQRI+ LR
Sbjct: 125 LDFRQTEKFQRIRKLR 140
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 95 PFERNRVRGPFWEFDRRGFYGPERHSIRHEASRCWSYFR------PPKPDSVCHHHSPDR 256
P + P +FD G+ G H ++++S S+ PP P S HHH
Sbjct: 830 PHHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPPPPPSSKSHHHPQQM 889
Query: 257 ERL 265
+++
Sbjct: 890 QQM 892
>AE014134-1158|AAF52433.1| 456|Drosophila melanogaster CG11221-PA
protein.
Length = 456
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 644 SIDRCIFFYIYLPESAFASFLGSYGSHDNGCVLLVHSVYHALDCCPSHSNSVFPDLSRED 465
++D +F + P AS +G G H+N C L+ + AL S N V DL E+
Sbjct: 168 TMDYYVFAMEHAPYGDLASNIGPNGLHENACKLISEQLSSALGFMHS-KNLVHRDLKIEN 226
>BT009996-1|AAQ22465.1| 1483|Drosophila melanogaster RE35509p protein.
Length = 1483
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 363 EYPTDRLASDATTTVLSEDMNTVDHLDE 446
++PTDRLAS A V S+D+ TV+++ E
Sbjct: 1350 KFPTDRLASAA---VASQDIKTVENMSE 1374
>AY129431-1|AAM76173.1| 1006|Drosophila melanogaster GM03621p
protein.
Length = 1006
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 363 EYPTDRLASDATTTVLSEDMNTVDHLDE 446
++PTDRLAS A V S+D+ TV+++ E
Sbjct: 873 KFPTDRLASAA---VASQDIKTVENMSE 897
>AY118983-1|AAM50843.1| 872|Drosophila melanogaster LP02069p
protein.
Length = 872
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 363 EYPTDRLASDATTTVLSEDMNTVDHLDE 446
++PTDRLAS A V S+D+ TV+++ E
Sbjct: 739 KFPTDRLASAA---VASQDIKTVENMSE 763
>AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-PA
protein.
Length = 881
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = -2
Query: 637 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTP 458
T + +T+T T TTT S +TT T ++T+S T P + P
Sbjct: 708 TTTTTTTTTCAPTTTTTCTPTTTTTTTCAPTTSSTTTTSTTTTCTSKTISTTTCP-ETAP 766
Query: 457 MWNPSSRWSTVFMSSLSTVVVASEARRS 374
S +T + S V A++++R+
Sbjct: 767 TTTACSDVTTTVCPTESKAVAATQSKRN 794
>AE014297-1400|AAS65141.1| 1477|Drosophila melanogaster CG31368-PB,
isoform B protein.
Length = 1477
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 363 EYPTDRLASDATTTVLSEDMNTVDHLDE 446
++PTDRLAS A V S+D+ TV+++ E
Sbjct: 1344 KFPTDRLASAA---VASQDIKTVENMSE 1368
>AE014297-1399|AAF54713.3| 1480|Drosophila melanogaster CG31368-PA,
isoform A protein.
Length = 1480
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 363 EYPTDRLASDATTTVLSEDMNTVDHLDE 446
++PTDRLAS A V S+D+ TV+++ E
Sbjct: 1347 KFPTDRLASAA---VASQDIKTVENMSE 1371
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,024,819
Number of Sequences: 53049
Number of extensions: 760188
Number of successful extensions: 2594
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 2335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2576
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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