Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3i07
         (218 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   1.3  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   1.3  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   1.3  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   1.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   1.3  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   1.3  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    19   5.3  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    19   6.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.2  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
           S L N   + N N+N YK   Y++
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLCYNI 106


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.4 bits (38), Expect = 5.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQ 183
           S L NKT   N N N Y  +
Sbjct: 305 SSLSNKTIHNNNNYNNYNNK 324


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 124 SRLKNKT*FCNQNDNGYKTQPYH 192
           S L NKT   N N   Y  + Y+
Sbjct: 316 SSLSNKTIHNNNNYKNYNKKLYY 338


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 71  NCIQILFTGLGSF 33
           +C+ +LF+G+  F
Sbjct: 408 DCVTLLFSGIVGF 420


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 71  NCIQILFTGLGSF 33
           +C+ +LF+G+  F
Sbjct: 408 DCVTLLFSGIVGF 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,507
Number of Sequences: 438
Number of extensions: 918
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)