Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3h17
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    27   0.61 
AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450 pr...    25   1.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.5  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   7.5  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   7.5  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   7.5  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   7.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 103 RSAQSITGVPGIALETATTNH-KTFNNLY 20
           R A  + G+P IAL+TA   H   F ++Y
Sbjct: 448 RKAPGLDGIPNIALKTAIKKHTAVFRSIY 476


>AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450
           protein.
          Length = 158

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 464 NFILSSAGFVVFQPCVFERRQMTAVGVCDFDQHG 363
           NF++ + G++V  P V +R Q  A GV   ++HG
Sbjct: 39  NFLVKAFGYIVQHPEVQQRIQAEADGV--LERHG 70


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 367  CWSKSQTPTAVIWRRSNTHGWKT 435
            CW+ S T   + W +S+   WKT
Sbjct: 1121 CWTDSST--VIYWLKSSPSRWKT 1141


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 579  DGINDALKTIPGSFEALQRSCRGREDFKVAIHDPWAAVQKPQKGV 713
            +G N   K     F+  Q    GRE+F +A     A +Q   KG+
Sbjct: 2484 EGTNKITKLYRQQFDRAQG---GREEFTMAHDSDGAVIQAEHKGI 2525


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 501 RSFPVDKVPLPNLSHLLYGFIPICGGDGINDALKTIP 611
           R   V+ VP P L   + GF P+           T+P
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 183


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 501 RSFPVDKVPLPNLSHLLYGFIPICGGDGINDALKTIP 611
           R   V+ VP P L   + GF P+           T+P
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 183


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 501 RSFPVDKVPLPNLSHLLYGFIPICGGDGINDALKTIP 611
           R   V+ VP P L   + GF P+           T+P
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 183


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 501 RSFPVDKVPLPNLSHLLYGFIPICGGDGINDALKTIP 611
           R   V+ VP P L   + GF P+           T+P
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 183


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 293 INGSPFTVGVAFP 255
           I+G+PF++G+A P
Sbjct: 642 IDGTPFSLGIALP 654


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 579  DGINDALKTIPGSFEALQRSCRGREDFKVAIHDPWAAVQKPQKGV 713
            +G N   K     F+  Q    GRE+F +A     A +Q   KG+
Sbjct: 2494 EGTNKITKLYRQQFDRAQG---GREEFTMAHDGDGAVIQAQHKGI 2535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,211
Number of Sequences: 2352
Number of extensions: 18585
Number of successful extensions: 47
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)