Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3h16
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical pr...    75   3e-14
AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical...    57   1e-08
AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical ...    44   6e-05
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    42   4e-04
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    39   0.003
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    35   0.051
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    31   0.48 
Z75547-6|CAA99903.1|  377|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U58756-9|AAC48086.1|  667|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U55363-10|AAL11103.1|  364|Caenorhabditis elegans Hypothetical p...    27   7.7  
AC024744-2|AAK72068.1|  327|Caenorhabditis elegans Hypothetical ...    27   7.7  
AC006712-8|AAU20838.1|  450|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical
           protein B0513.3 protein.
          Length = 62

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +1

Query: 346 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGN 495
           MAKSKNHTNHNQN+KAHRNGI KP+K    S  G+D KF++N RF +K N
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSRKNN 50


>AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical
           protein Y47H9C.14 protein.
          Length = 87

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +1

Query: 352 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGN 495
           K +NHTNHN+N KAHRNGI KP+K    S  G   +F+++ RF +K N
Sbjct: 14  KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRKNN 61


>AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical
           protein Y37H9A.5 protein.
          Length = 167

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 352 KSKNHTNHNQNRKAHRNGIKKPR 420
           KSKNHTNHNQN  AHR GI KP+
Sbjct: 80  KSKNHTNHNQNNTAHRIGITKPK 102


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = -2

Query: 328 PQGSVLGPLLFLIYINDFPKAIEHPMILFADDSTVIFTEKEL 203
           PQGSV+ P LF  Y+ D P   +  +I +ADD ++I  +K++
Sbjct: 534 PQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKI 575


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
 Frame = -2

Query: 328 PQGSVLGPLLFLIYINDFPKAIEHPMIL--FADDSTVIF----TEKELNSLESAINTTL 170
           PQG+VL PLLF IY+ND    +   +    FADD+ +      TE E N+L+SA++  +
Sbjct: 78  PQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTESE-NNLQSALDAVV 135


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 328  PQGSVLGPLLFLIYIND--FPKAIEHPMILFADDSTVIFTEKEL--NSLESAIN 179
            PQGSV GPLLF+++IN+     A    +  FADD  +  T+  +  NS++  ++
Sbjct: 882  PQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFHTDPTIIQNSIDIIVS 935


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 328 PQGSVLGPLLFLIYINDFPKAIEHPMI---LFADDSTV 224
           P+GSV GP LFLI+IN    ++  P I    FADD  V
Sbjct: 58  PKGSVSGPFLFLIFINSLLLSVP-PSISCSAFADDLKV 94


>Z75547-6|CAA99903.1|  377|Caenorhabditis elegans Hypothetical
           protein R11D1.5 protein.
          Length = 377

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +3

Query: 93  CGYVTIFVLFRLITKXFXNNHSITSLRVVLIADSKEFNSFSVNMTVLSSAKRIIGCSMAL 272
           C +  ++ +  LITK +   HS TS  +V++       S SVN  + S      GCS+++
Sbjct: 51  CVFEILYTILGLITKPYV--HSYTSRVIVIVDVKNSVFSRSVNKFLNSLICGFYGCSVSI 108


>U58756-9|AAC48086.1|  667|Caenorhabditis elegans Hypothetical
           protein F58F9.7 protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +3

Query: 99  YVTIFVLFRLITKXFXNNHSITSLRVVLIADSKEFNSFSVNMTVLSSAKRIIGCSMALGK 278
           Y++  +  R+  K F  + +   +RV++   S E + FS  +  LSS  + +   + + +
Sbjct: 341 YLSAAICIRIFQKKFVGHFTEYMMRVIMGEKSDELSEFSKEVHALSSGAKPVATWLGV-E 399

Query: 279 SLI*IRKRSG 308
           SL   RK  G
Sbjct: 400 SLGEARKACG 409


>U55363-10|AAL11103.1|  364|Caenorhabditis elegans Hypothetical
           protein ZC404.13 protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 165 SLRVVLIADSKEFNSFSVNMTVLSSAKRIIGCSM-ALGKSLI 287
           ++ +V++   KE  S  VN+T++  A    GCS+ AL + L+
Sbjct: 57  NIMIVIVISQKEMRSSGVNVTMMLIAVCDFGCSVSALAQLLL 98


>AC024744-2|AAK72068.1|  327|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.2 protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 298 KGAALVRCLED*KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 435
           KGA      E+    K++K K+H  H+  RK  +N   K ++ R E
Sbjct: 263 KGAEEEEKKEEKSLPKVSKCKHHLRHHHCRKHRKNCPAKAKRLREE 308


>AC006712-8|AAU20838.1|  450|Caenorhabditis elegans Hypothetical
           protein Y119C1B.3 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 334 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHES--TLGMDPKFLRNQR 477
           K+ K A + NH N ++N     NG + P+KTR  S  T    PK  R+ R
Sbjct: 376 KKSKKAAAANHKNASRN-----NGNETPKKTRRSSSTTPTRTPKQRRSSR 420


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,163,845
Number of Sequences: 27780
Number of extensions: 204615
Number of successful extensions: 598
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)