Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3h06
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2838|AAF53606.1|  117|Drosophila melanogaster CG6840-PA...   221   4e-58
BT001454-1|AAN71209.1|  136|Drosophila melanogaster GM15177p pro...   202   4e-52
BT028781-1|ABI34162.1|  105|Drosophila melanogaster IP05502p pro...    50   3e-06
AE014134-3052|AAF53770.1|  105|Drosophila melanogaster CG10685-P...    50   3e-06
AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB...    29   4.6  

>AE014134-2838|AAF53606.1|  117|Drosophila melanogaster CG6840-PA
           protein.
          Length = 117

 Score =  221 bits (541), Expect = 4e-58
 Identities = 102/117 (87%), Positives = 112/117 (95%)
 Frame = +2

Query: 164 MNAPPTFESFLLYDGEKKVQKEEDTKVTNAAIFTVNKEDHTLGNMIRHQLLKDPKVLFAG 343
           MNAPPTFESFLLY+GEKK+ KE DTKVTNAAIFT+NKEDHTLGNMIR+QLLKDP VLFAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 344 YKIPHPLEHKFVLRIQTTSDYTPQEAFMNAITDLTSELSLFEERFKEAIKEKKEGLD 514
           YK+PHPLEHKFV+RIQTT+DY+PQEAFMNAITDL +ELSLFEERFK+AIKEKKEG D
Sbjct: 61  YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEGGD 117


>BT001454-1|AAN71209.1|  136|Drosophila melanogaster GM15177p
           protein.
          Length = 136

 Score =  202 bits (492), Expect = 4e-52
 Identities = 102/136 (75%), Positives = 111/136 (81%), Gaps = 19/136 (13%)
 Frame = +2

Query: 164 MNAPPTFESFLLYDGEKKVQKEEDTKVTNAAIFTVNKEDHTLGNMIRH------------ 307
           MNAPPTFESFLLY+GEKK+ KE DTKVTNAAIFT+NKEDHTLGNMIR             
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRKYVGQQARLITHE 60

Query: 308 -------QLLKDPKVLFAGYKIPHPLEHKFVLRIQTTSDYTPQEAFMNAITDLTSELSLF 466
                  QLLKDP VLFAGYK+PHPLEHKFV+RIQTT+DY+PQEAFMNAITDL +ELSLF
Sbjct: 61  ICILACSQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLF 120

Query: 467 EERFKEAIKEKKEGLD 514
           EERFK+AIKEKKEG D
Sbjct: 121 EERFKDAIKEKKEGGD 136


>BT028781-1|ABI34162.1|  105|Drosophila melanogaster IP05502p
           protein.
          Length = 105

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +2

Query: 260 FTVNKEDHTLGNMIRHQLLKDPKVLFAGYKIPHPLEHKFVLRIQTTSD 403
           F    E HTLGN ++  + + P+V F GY IPHP E K   RIQ+  D
Sbjct: 20  FVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRD 67


>AE014134-3052|AAF53770.1|  105|Drosophila melanogaster CG10685-PA
           protein.
          Length = 105

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +2

Query: 260 FTVNKEDHTLGNMIRHQLLKDPKVLFAGYKIPHPLEHKFVLRIQTTSD 403
           F    E HTLGN ++  + + P+V F GY IPHP E K   RIQ+  D
Sbjct: 20  FVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRD 67


>AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB,
           isoform B protein.
          Length = 1839

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 167 NAPPTFESFLLYDGEKKVQKEEDTKVTNAAIFTVNKEDHTLGNMIRHQL 313
           ++PP F+ FL    E ++ +  D + T   + TVN +DH     IR+Q+
Sbjct: 71  DSPPYFDRFLY---ETEIDENADLQST---VLTVNAKDHNESTNIRYQI 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,059,470
Number of Sequences: 53049
Number of extensions: 352921
Number of successful extensions: 723
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)