Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3h04
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E940 Cluster: CG4878-PA, isoform A; n=4; Diptera|Rep:... 251 2e-65
UniRef50_P55884 Cluster: Eukaryotic translation initiation facto... 243 3e-63
UniRef50_Q5BXX3 Cluster: SJCHGC06669 protein; n=1; Schistosoma j... 182 6e-45
UniRef50_Q9C5Z1 Cluster: Eukaryotic translation initiation facto... 155 1e-36
UniRef50_Q4P6G4 Cluster: Putative uncharacterized protein; n=1; ... 145 1e-33
UniRef50_A4S7N8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 144 2e-33
UniRef50_A1CS92 Cluster: Eukaryotic translation initiation facto... 137 2e-31
UniRef50_Q0UY05 Cluster: Putative uncharacterized protein; n=1; ... 137 3e-31
UniRef50_Q9XWI6 Cluster: Putative uncharacterized protein eif-3.... 129 6e-29
UniRef50_Q6C1H8 Cluster: Similar to DEHA0F10681g Debaryomyces ha... 128 1e-28
UniRef50_P12806 Cluster: Putative PRT1 protein; n=6; Saccharomyc... 116 8e-25
UniRef50_P06103 Cluster: Eukaryotic translation initiation facto... 113 3e-24
UniRef50_Q54QW1 Cluster: Putative uncharacterized protein; n=1; ... 113 4e-24
UniRef50_Q10425 Cluster: Probable eukaryotic translation initiat... 107 2e-22
UniRef50_Q8GU04 Cluster: Translation initiation factor; n=1; Vis... 103 3e-21
UniRef50_Q5CPL7 Cluster: Prtip-like IF39 eukaryotic translation ... 81 4e-14
UniRef50_Q4UA40 Cluster: Eukaryotic translation initiation facto... 78 2e-13
UniRef50_Q5Y250 Cluster: PRT1p; n=8; Tremellomycetes|Rep: PRT1p ... 78 3e-13
UniRef50_Q8I3T1 Cluster: Eukaryotic translation initiation facto... 77 6e-13
UniRef50_A0CIH2 Cluster: Chromosome undetermined scaffold_19, wh... 50 6e-05
UniRef50_A3LXC4 Cluster: RNA recognition motif-containing protei... 45 0.002
UniRef50_A2EIA0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium (Vin... 42 0.012
UniRef50_Q9ZQA8 Cluster: Probable polyadenylate-binding protein ... 42 0.012
UniRef50_A2F6R9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q98RZ7 Cluster: Polyadenylate-binding protein; n=1; Gui... 42 0.021
UniRef50_Q556F3 Cluster: Putative uncharacterized protein; n=2; ... 41 0.028
UniRef50_A2EKZ8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.048
UniRef50_Q2GSX8 Cluster: Polyadenylate-binding protein, cytoplas... 40 0.048
UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; ... 40 0.064
UniRef50_A5K5L8 Cluster: Clustered-asparagine-rich protein, puta... 40 0.064
UniRef50_A5DNE5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.064
UniRef50_A5B3Z9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.084
UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.084
UniRef50_UPI000150A965 Cluster: hypothetical protein TTHERM_0044... 39 0.11
UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Re... 39 0.11
UniRef50_Q55BM9 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplas... 39 0.11
UniRef50_Q9UT83 Cluster: Meiotically up-regulated gene 28 protei... 39 0.11
UniRef50_UPI00006CFA0A Cluster: hypothetical protein TTHERM_0042... 39 0.15
UniRef50_Q5DH08 Cluster: SJCHGC05090 protein; n=1; Schistosoma j... 39 0.15
UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2; The... 39 0.15
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_UPI000049913F Cluster: RNA-binding protein; n=1; Entamo... 38 0.19
UniRef50_Q7RL66 Cluster: RNA recognition motif, putative; n=6; P... 38 0.19
UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;... 38 0.26
UniRef50_Q8IIG9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2; ... 38 0.26
UniRef50_A7AV37 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_Q55XM4 Cluster: Putative uncharacterized protein; n=2; ... 38 0.34
UniRef50_UPI00006CB791 Cluster: hypothetical protein TTHERM_0034... 37 0.59
UniRef50_Q7RNK1 Cluster: Ribonucleoprotein homolog F21B7.26-Arab... 37 0.59
UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2; Theiler... 37 0.59
UniRef50_A2E4Y0 Cluster: Putative uncharacterized protein; n=2; ... 37 0.59
UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, wh... 37 0.59
UniRef50_P04147 Cluster: Polyadenylate-binding protein, cytoplas... 37 0.59
UniRef50_Q259G3 Cluster: H0124B04.13 protein; n=5; Oryza sativa|... 36 0.78
UniRef50_Q4N1R5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.78
UniRef50_Q0IGP7 Cluster: SD20656p; n=6; Drosophila melanogaster|... 36 0.78
UniRef50_A7SN30 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.78
UniRef50_Q1MTR2 Cluster: RNA-binding protein; n=1; Schizosacchar... 36 0.78
UniRef50_A7TK65 Cluster: Putative uncharacterized protein; n=1; ... 36 0.78
UniRef50_Q8SR30 Cluster: Polyadenylate-binding protein, cytoplas... 36 0.78
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 36 0.78
UniRef50_UPI0000498A68 Cluster: RNA-binding protein; n=2; Entamo... 36 1.0
UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Re... 36 1.0
UniRef50_Q7RDM4 Cluster: PolyA binding protein-related; n=5; Pla... 36 1.0
UniRef50_A7SFY3 Cluster: Predicted protein; n=3; Nematostella ve... 36 1.0
UniRef50_A7AT74 Cluster: RNA-binding protein P22H7.02c, putative... 36 1.0
UniRef50_A1EAA0 Cluster: Polyadenylate-binding protein; n=3; Pla... 36 1.0
UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole geno... 36 1.4
UniRef50_Q550X7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q54B40 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q4X3X5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q234T4 Cluster: Splicing factor, CC1-like family protei... 36 1.4
UniRef50_A4V6M1 Cluster: Bruno-like protein; n=1; Dugesia japoni... 36 1.4
UniRef50_Q4P6W4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;... 36 1.4
UniRef50_A1CEY1 Cluster: RNA binding protein (Rbm8A), putative; ... 36 1.4
UniRef50_Q13310 Cluster: Polyadenylate-binding protein 4 (Poly(A... 36 1.4
UniRef50_UPI0000584283 Cluster: PREDICTED: similar to RIKEN cDNA... 35 1.8
UniRef50_UPI00004982EB Cluster: hypothetical protein 12.t00007; ... 35 1.8
UniRef50_Q8ILZ7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q4P9A2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q15287 Cluster: RNA-binding protein with serine-rich do... 35 1.8
UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225, w... 35 2.4
UniRef50_Q54WI5 Cluster: SAP DNA-binding domain-containing prote... 35 2.4
UniRef50_Q09584 Cluster: Rnp (Rrm rna binding domain) containing... 35 2.4
UniRef50_Q7SG09 Cluster: Multiple RNA-binding domain-containing ... 35 2.4
UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whol... 34 3.2
UniRef50_Q9SN69 Cluster: Putative uncharacterized protein F24J7.... 34 3.2
UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 34 3.2
UniRef50_Q22Z94 Cluster: RNA-binding motif protein 8; n=1; Tetra... 34 3.2
UniRef50_Q2U6F2 Cluster: RNA-binding protein RBM8/Tsunagi; n=9; ... 34 3.2
UniRef50_Q4N6G9 Cluster: RNA-binding protein, putative; n=2; The... 34 4.2
UniRef50_Q1ZXB1 Cluster: CCHC zinc finger domain-containing prot... 34 4.2
UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845 Schizosacch... 34 4.2
UniRef50_O60176 Cluster: Uncharacterized RNA-binding protein C23... 34 4.2
UniRef50_P36629 Cluster: Splicing factor U2AF 59 kDa subunit; n=... 34 4.2
UniRef50_UPI000155D313 Cluster: PREDICTED: similar to integrin a... 33 5.5
UniRef50_UPI000150A2AA Cluster: RNA binding protein; n=1; Tetrah... 33 5.5
UniRef50_UPI0000162F82 Cluster: PAB1 (POLY(A) BINDING PROTEIN 1)... 33 5.5
UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: No... 33 5.5
UniRef50_A6PPI3 Cluster: Putative uncharacterized protein precur... 33 5.5
UniRef50_A3C5F0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A3AVD4 Cluster: Putative uncharacterized protein; n=3; ... 33 5.5
UniRef50_Q9W158 Cluster: CG4612-PA; n=2; Sophophora|Rep: CG4612-... 33 5.5
UniRef50_Q8IEH4 Cluster: Putative uncharacterized protein MAL13P... 33 5.5
UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6; P... 33 5.5
UniRef50_Q4FW55 Cluster: Poly(A) binding protein, putative; n=6;... 33 5.5
UniRef50_A7ST95 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.5
UniRef50_A2F3S3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_O94359 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 5.5
UniRef50_O74400 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 5.5
UniRef50_UPI00006CEB5E Cluster: Isoleucyl-tRNA synthetase; n=1; ... 33 7.3
UniRef50_Q2L5Q0 Cluster: LexA repressor; n=5; Clostridium perfri... 33 7.3
UniRef50_A7RGY6 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.3
UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2; Euk... 33 7.3
UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, wh... 33 7.3
UniRef50_Q751F6 Cluster: AGL250Wp; n=5; Saccharomycetales|Rep: A... 33 7.3
UniRef50_Q15717 Cluster: ELAV-like protein 1; n=28; Tetrapoda|Re... 33 7.3
UniRef50_UPI0000498AD7 Cluster: enhancer binding protein 2; n=1;... 33 9.7
UniRef50_Q31NN8 Cluster: ATP-dependent DNA helicase, RecQ family... 33 9.7
UniRef50_Q3WI81 Cluster: G-protein beta WD-40 repeat precursor; ... 33 9.7
UniRef50_Q8IM34 Cluster: RNA binding protein, putative; n=4; Pla... 33 9.7
UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1; Schis... 33 9.7
UniRef50_Q5CYN8 Cluster: Nop15p/nopp34; nucleolar protein with 1... 33 9.7
UniRef50_O15798 Cluster: CG3; n=7; Plasmodium|Rep: CG3 - Plasmod... 33 9.7
UniRef50_A7AR42 Cluster: RNA binding motif containing protein; n... 33 9.7
UniRef50_A0D0L0 Cluster: Chromosome undetermined scaffold_33, wh... 33 9.7
UniRef50_Q9P6P7 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 9.7
UniRef50_Q4P8D6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_O42847 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 9.7
>UniRef50_Q0E940 Cluster: CG4878-PA, isoform A; n=4; Diptera|Rep:
CG4878-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 690
Score = 251 bits (614), Expect = 2e-65
Identities = 117/202 (57%), Positives = 142/202 (70%), Gaps = 3/202 (1%)
Frame = +3
Query: 138 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 317
LL D+L Q+P E+DG E+VVVVD P+V P RLEKL+ VINK+FS +G+IVN YP E
Sbjct: 40 LLGDMLAQRPSEADGVESVVVVDNIPKVEPVRLEKLKLVINKLFSNYGEIVNVVYPVDEE 99
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 497
G T GY F+EY + A EAVK NN +LDK HTF VNLFTDFQKY +IP++WEPP Q
Sbjct: 100 GKTKGYAFMEYKQARQAEEAVKKLNNHRLDKNHTFAVNLFTDFQKYENIPEKWEPPTVQT 159
Query: 498 FKVQSDLQWYLMDPDAYDQFLVGIGTG---VALQVWQNALPEPLLLQERPNWTETYAVWS 668
FKVQSDL ++ DPD YDQ+ V T V + WQN LPEP L+ R +T+T+ WS
Sbjct: 160 FKVQSDLYNFINDPDTYDQYCVAAETAPNCVQVGFWQNVLPEPFELETRERFTDTFVKWS 219
Query: 669 PLGTYLATFHWRGVALWGWSKF 734
PLGTY+ TFH GVA+WG S F
Sbjct: 220 PLGTYVVTFHKPGVAIWGGSSF 241
>UniRef50_P55884 Cluster: Eukaryotic translation initiation factor 3
subunit 9; n=31; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 9 - Homo sapiens (Human)
Length = 814
Score = 243 bits (595), Expect = 3e-63
Identities = 110/199 (55%), Positives = 147/199 (73%)
Frame = +3
Query: 138 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 317
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 497
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 498 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 677
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 678 TYLATFHWRGVALWGWSKF 734
TYLATFH RG+ALWG KF
Sbjct: 347 TYLATFHQRGIALWGGEKF 365
>UniRef50_Q5BXX3 Cluster: SJCHGC06669 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06669 protein - Schistosoma
japonicum (Blood fluke)
Length = 369
Score = 182 bits (444), Expect = 6e-45
Identities = 87/199 (43%), Positives = 119/199 (59%)
Frame = +3
Query: 138 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 317
++ DIL QKPK D + V+VDGCP VGP + E L+ + FSK G IV+ +P
Sbjct: 19 IIPDILAQKPKIEDHLGSTVIVDGCPVVGPAKFELLKKFLLDKFSKIGPIVDHEFPLDNE 78
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 497
T GYIF+ Y N + A++AV+ NN LDK HTF V L +DF++ +D+P EW PP Q
Sbjct: 79 KQTKGYIFITYENGKAASQAVRTMNNTPLDKNHTFQVTLLSDFERATDVPTEWIPPPKQE 138
Query: 498 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 677
+K +L+ +L++ DQF V G V+ + EP++ +ER WT+ + WSP G
Sbjct: 139 YKDLGNLKSWLLNEFCRDQFAVVYNDGETGSVYWHTPVEPVIAEERARWTDGWMRWSPRG 198
Query: 678 TYLATFHWRGVALWGWSKF 734
TYLAT H GV LWG KF
Sbjct: 199 TYLATMHPLGVILWGGEKF 217
>UniRef50_Q9C5Z1 Cluster: Eukaryotic translation initiation factor 3
subunit 9; n=18; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 9 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 712
Score = 155 bits (375), Expect = 1e-36
Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
Frame = +3
Query: 180 GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTT-ENGLTTGYIFLEY 350
G+ N++VVD P V E+ EKL+ V+ KI+++ G I + P + +T GY F+E+
Sbjct: 53 GFGNIIVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEF 112
Query: 351 SNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYL 530
+ PQ A A + ++ KLDK H F VN+F DF + ++ +EWEPP +P+ +LQ +L
Sbjct: 113 NTPQEAQNAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWL 172
Query: 531 MDPDAYDQFLV--GIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 704
D A DQ ++ G T V + PEP + +RP WTE+Y WSPLGTYL T H +
Sbjct: 173 TDEKARDQLVIRSGPDTEVFWNDTRQKAPEP--VHKRPYWTESYVQWSPLGTYLVTLHKQ 230
Query: 705 GVALWG 722
G A+WG
Sbjct: 231 GAAVWG 236
>UniRef50_Q4P6G4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 745
Score = 145 bits (351), Expect = 1e-33
Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
Frame = +3
Query: 153 LEQK--PKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKI----VNEYYPTTE 314
+EQK K +G ++V+V++G P + R +KL I K F I + P +
Sbjct: 27 IEQKYSVKFDEGLDDVIVIEGVPVITESRQQKLFETIQKRFKTHANIDIAVEGMHIPYAD 86
Query: 315 NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQ 494
NG + GYIF+E ++ ++AA+A++ + DK+H F V+ FTD +K++ + + +E P +
Sbjct: 87 NGESKGYIFVEMASAEDAAQAIRQMDGYAFDKKHRFSVHRFTDVEKFASLSETYEEPQEE 146
Query: 495 PFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPL 674
FK + L+ +L DP DQ ++ G V + W N +P + RP WTE+Y WSPL
Sbjct: 147 EFKPREHLRSWLADPAGRDQLVICRGDDVEI-AWHNRSSDPQVEHSRPRWTESYVQWSPL 205
Query: 675 GTYLATFHWRGVALWG 722
GT+L TFH +G+ +WG
Sbjct: 206 GTFLTTFHRQGIQIWG 221
>UniRef50_A4S7N8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 713
Score = 144 bits (349), Expect = 2e-33
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Frame = +3
Query: 159 QKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTTENGLTT- 329
++ KE G+ +V+VVD PQ+ + KL +V+ KIF++ G+I P E T+
Sbjct: 47 EEAKEDTGFASVIVVDNLPQIPEAKFGKLLNVLTKIFTQIGEIREGGMLMPQDEATKTSL 106
Query: 330 GYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQ 509
GY F+E++N Q A AV+ T+ KLDK H F V F DF+KY +P E+ P P+PF +
Sbjct: 107 GYAFVEFANEQQAQSAVEQTDGYKLDKTHIFKVCKFDDFEKYQKVPDEYVAPPPKPFAPR 166
Query: 510 SDLQWYLMDPDAYDQFLVGIGTGVALQVWQN-ALPEPLLLQERPNWTETYAVWSPLGTYL 686
+ Q ++MD DQF+ G + W + + + R +WTE+Y WSP G++L
Sbjct: 167 ENTQAWMMDQRGRDQFVCRFGDETQI-FWNDPQTKKGEDVYTRTHWTESYVQWSPKGSFL 225
Query: 687 ATFHWRGVALWGWSKF 734
AT H +GVALWG F
Sbjct: 226 ATVHRQGVALWGGDSF 241
>UniRef50_A1CS92 Cluster: Eukaryotic translation initiation factor 3
subunit EifCb, putative; n=15; Pezizomycotina|Rep:
Eukaryotic translation initiation factor 3 subunit
EifCb, putative - Aspergillus clavatus
Length = 741
Score = 137 bits (332), Expect = 2e-31
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Frame = +3
Query: 168 KESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTTENGLTTGYIF 341
K +G + VV+DG P V E +KL + + + G + + P + ++ GY F
Sbjct: 33 KLEEGLDTFVVIDGLPVVPEESRQKLVKFLMRKLNTVGHTSEDAVFMPVNDKNMSEGYAF 92
Query: 342 LEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKY---SDIPKEWEPPAPQPFKVQS 512
+EY P+ A AVK + LDK+HT LVN D ++Y I +E++PP +PFK +
Sbjct: 93 VEYETPEQAVAAVKQLHGTPLDKKHTLLVNKLMDIERYGREGRIDEEYKPPTIEPFKEKE 152
Query: 513 DLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLAT 692
L+ +L DP+A DQF + G V + W N P + +R +WT+ + WSP GT+LA+
Sbjct: 153 HLRSWLSDPNARDQFALYRGDKVGV-FWNNKNNPPENVVDRAHWTQLFVQWSPKGTFLAS 211
Query: 693 FHWRGVALWGWSKFS 737
H +GV LWG FS
Sbjct: 212 VHPQGVQLWGGPAFS 226
>UniRef50_Q0UY05 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 591
Score = 137 bits (331), Expect = 3e-31
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Frame = +3
Query: 147 DILEQ-KPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTTEN 317
DI EQ + + +G + VV+DG P V + KL + + + GK+ + + P +N
Sbjct: 24 DIEEQFQVRLDEGLDAFVVIDGLPVVPEDSKGKLVKFVLRKLNTVGKVKEDGVHMPVGDN 83
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSD---IPKEWEPPA 488
G T GY F+EYS P A AVK + LDK+HT VN TD +Y I +E+ P
Sbjct: 84 GKTEGYAFVEYSAPAEAVAAVKQLHGTALDKKHTMAVNKLTDIDRYGKEGRIDEEYHAPE 143
Query: 489 PQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWS 668
PF+ + L+W+L DPD+ DQ V + W P + +R NWTE++ WS
Sbjct: 144 IAPFEQKEHLRWWLGDPDSRDQMAFYRADKVGI-FWNEKEETPEQIVDRENWTESFIQWS 202
Query: 669 PLGTYLATFHWRGVALWG---WSK 731
P GTYL + H +GV LWG WS+
Sbjct: 203 PRGTYLTSMHAQGVQLWGGKAWSR 226
>UniRef50_Q9XWI6 Cluster: Putative uncharacterized protein eif-3.B;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein eif-3.B - Caenorhabditis elegans
Length = 725
Score = 129 bits (312), Expect = 6e-29
Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Frame = +3
Query: 138 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 317
L+ D+L +KP + +N V + G P VG +RL KLQSV+ K+ + V Y P +
Sbjct: 29 LVPDVLHKKPTIDEFEDNCVFIAGIPVVGADRLGKLQSVLKKVLERLDPAVKLYIPPSPE 88
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 497
G G + E+++ ++A AVK+ N DK HTF F D ++ W P Q
Sbjct: 89 GGCLGVLLTEWADQRSAQFAVKSLNGYAFDKNHTFTARSFKDMKQLEAPSDHWTTPEKQA 148
Query: 498 FKVQSDLQWYLMDPDAYDQFLV-----GIGT-GVALQVWQN--ALPEPLLLQERPNWTET 653
+ DL W+L + DQF + G+ T GV + N L ER NWTET
Sbjct: 149 YNDVGDLWWWLQNERCRDQFAISHDKLGVPTVGVFTNMKGNDPELAGDADKAERANWTET 208
Query: 654 YAVWSPLGTYLATFHWRGVALWGWSKFS 737
WSP G+YL+T H +G+ LWG ++
Sbjct: 209 VFTWSPHGSYLSTIHKQGIILWGGKDYA 236
>UniRef50_Q6C1H8 Cluster: Similar to DEHA0F10681g Debaryomyces
hansenii IPF 8292.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0F10681g Debaryomyces hansenii IPF 8292.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 717
Score = 128 bits (309), Expect = 1e-28
Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 10/203 (4%)
Frame = +3
Query: 144 ADILEQKPKESD-GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTTE 314
+D+ E+ +D G+E+ +VVDG P + + L +V+ K F GKI + + P E
Sbjct: 12 SDLEEKYAVNADEGFESFIVVDGAPVIPQAKQAALANVMKKFFGAVGKIKEDGIFIPFDE 71
Query: 315 -NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYS---DIPK--EW 476
G +TG++F+EY + AA AVK+ +N + DK H LVN ++ +KY D K E+
Sbjct: 72 ATGKSTGFVFIEYETGEMAAAAVKSFHNKQFDKNHKLLVNKLSEVEKYGMQYDTLKTEEF 131
Query: 477 EPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQ-ERPNWTET 653
P +PF Q L+ +LMDP DQF++ G V V+ N + L +R WTET
Sbjct: 132 VEPETEPFVEQGHLRSWLMDPQGRDQFVLHRGDTVG--VFWNKKGDTLEADVDRERWTET 189
Query: 654 YAVWSPLGTYLATFHWRGVALWG 722
WSP GTYL + H +GV LWG
Sbjct: 190 QVYWSPTGTYLVSTHTQGVQLWG 212
>UniRef50_P12806 Cluster: Putative PRT1 protein; n=6;
Saccharomycetales|Rep: Putative PRT1 protein - Pichia
angusta (Yeast) (Hansenula polymorpha)
Length = 220
Score = 116 bits (278), Expect = 8e-25
Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Frame = +3
Query: 165 PKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 344
P+ YE+ V+ DG P + L+ V+ K+FS+ GK+V+ + P ENG T G++ +
Sbjct: 29 PEPEHSYEHFVICDGAPIAPEAKAPVLKKVLTKLFSQCGKVVDMFMPL-ENGQTKGFLII 87
Query: 345 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYS---DIPKEWEPPAPQPFKVQSD 515
E + A +AVK N KLD +H VN D +KY+ +I +E+ PA F+
Sbjct: 88 ELDSAAAADKAVKQLNGKKLDVKHRLAVNKLPDMEKYALNDNISEEFREPAIPEFRSHGY 147
Query: 516 LQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATF 695
L+ +L+DP+ +QF++ V + ++ + +++ R +WT +SP GTYL +F
Sbjct: 148 LKSWLLDPNGREQFMLHHHDTVGVYWYKKNIQPEEVIEPRAHWTSASMKFSPKGTYLFSF 207
Query: 696 HWRGVALWG 722
GV WG
Sbjct: 208 FPGGVQAWG 216
>UniRef50_P06103 Cluster: Eukaryotic translation initiation factor 3
90 kDa subunit; n=6; Saccharomycetales|Rep: Eukaryotic
translation initiation factor 3 90 kDa subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 763
Score = 113 bits (273), Expect = 3e-24
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 6/203 (2%)
Frame = +3
Query: 144 ADILEQ-KPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-N 317
+D+ EQ K E ++ +VV+G P + ++ L+ + +FSK GK+VN +P E
Sbjct: 61 SDLEEQYKVTEEFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEAT 120
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYS--DIPKEWEPPAP 491
G T G++F+E + +A + +K+ + +LD +H + D ++Y+ D E+ P
Sbjct: 121 GKTKGFLFVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSDDFDTEFREPDM 180
Query: 492 QPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNAL--PEPLLLQERPNWTETYAVW 665
F S L+ +LMD DQF+ + V V+ N++ E L++ R NW+ Y +
Sbjct: 181 PTFVPSSSLKSWLMDDKVRDQFV--LQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRF 238
Query: 666 SPLGTYLATFHWRGVALWGWSKF 734
SP GTYL ++H +GV WG F
Sbjct: 239 SPKGTYLFSYHQQGVTAWGGPNF 261
>UniRef50_Q54QW1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 660
Score = 113 bits (272), Expect = 4e-24
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Frame = +3
Query: 159 QKPKESD-GYENVVVVDGCPQVGPERLEKLQSVINKIFSKF--GKIVNEYYPTTENGLTT 329
+ P + D + +VVD P + EKL+S++ KI+ ++V + T
Sbjct: 9 EPPVQIDTSFNKFIVVDNIPVAPEAKHEKLKSILVKIYQNRPGAEVVGIHLALDAQRNTK 68
Query: 330 GYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQ 509
G+ F+EYS ++A +A + NN LDK HT VNL DF K+++ + ++PP + FK +
Sbjct: 69 GFAFIEYSKKESAIDAATSLNNYPLDKSHTLKVNLLDDFSKFANFEETYKPPTREDFKPK 128
Query: 510 SDLQWYLMDPDA---YDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGT 680
+ +L DP A YDQF+ G + + + +P++ + + T +Y WS G+
Sbjct: 129 PNYNQWLSDPKALKGYDQFVTRYGDYTDICWNEMHVGKPMVEKSSVSLTSSYVQWSNTGS 188
Query: 681 YLATFHWRGVALWG 722
YL TFH G+AL+G
Sbjct: 189 YLVTFHPDGIALYG 202
>UniRef50_Q10425 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 9; n=1; Schizosaccharomyces pombe|Rep:
Probable eukaryotic translation initiation factor 3
subunit 9 - Schizosaccharomyces pombe (Fission yeast)
Length = 725
Score = 107 bits (258), Expect = 2e-22
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Frame = +3
Query: 180 GYENVVVVDGCPQVGPERLEKL-QSVINKIFSKFGKIVNE--YYPTTE-NG--LTTGYIF 341
GY+ VVV++G P V + + + + +K+ +K GK+ Y P E NG ++ G +F
Sbjct: 36 GYDTVVVIEGAPVVEEAKQQDFFRFLSSKVLAKIGKVKENGFYMPFEEKNGKKMSLGLVF 95
Query: 342 LEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQ 521
++ N A V+ + ++ K HTF+V +K P E+ + FK + L+
Sbjct: 96 ADFENVDGADLCVQELDGKQILKNHTFVVRKLNQLEKAFSTPDEFSFEERE-FKEREHLR 154
Query: 522 WYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHW 701
+L D DQF+ G V++ W P + +R NWTETY WSP+GTYL + H
Sbjct: 155 SWLTDYYGRDQFISYYGNRVSVN-WNRKSDVPEQIVDRENWTETYVQWSPMGTYLVSLHL 213
Query: 702 RGVALWG 722
RG+ LWG
Sbjct: 214 RGIQLWG 220
>UniRef50_Q8GU04 Cluster: Translation initiation factor; n=1; Viscum
album subsp. album|Rep: Translation initiation factor -
Viscum album subsp. album
Length = 237
Score = 103 bits (248), Expect = 3e-21
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Frame = +3
Query: 147 DILEQKPKESD-GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPT-TE 314
D+ ++ E D G+ N +VVD P V E+ EKL+ VI KIFS+ G I +E + P ++
Sbjct: 99 DLHQEDELEYDPGFGNAIVVDNLPVVPLEKFEKLEGVIRKIFSQIGVIKDEGLFMPVDSD 158
Query: 315 NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQ 494
T GY F+EY+ Q A A + T++ KLD+ H F VN+F DF+K++++P +W P +
Sbjct: 159 THKTLGYCFIEYNTAQEAELAKEKTHSYKLDRSHIFSVNMFDDFEKFNEVPDQWAPSETK 218
Query: 495 PFKVQSDLQWY 527
P+ +L W+
Sbjct: 219 PYVPGENLTWH 229
>UniRef50_Q5CPL7 Cluster: Prtip-like IF39 eukaryotic translation
initiation factor 3; n=2; Cryptosporidium|Rep:
Prtip-like IF39 eukaryotic translation initiation factor
3 - Cryptosporidium parvum Iowa II
Length = 724
Score = 80.6 bits (190), Expect = 4e-14
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Frame = +3
Query: 153 LEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYY--------PT 308
+E+ SD + V+ G P +G ++ E+ + I ++ K++ Y P
Sbjct: 40 IEEPLTLSDSFSKSFVIFGLPCIGSDKYERFLKALRTIINQTLKMMRVEYDENFLLDVPQ 99
Query: 309 TENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSD----IPKEW 476
+G T G L +SN A +A + DKQ F +F D ++ + P +
Sbjct: 100 DVDGSTKGVAILTFSNSFQAETVCQALSKAPFDKQTKFNTVMFDDVKRIIEQDESAPGHF 159
Query: 477 EPPAPQPFKV-QSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNA--LPEPLLLQERPN-- 641
E P P + D++ +LM P +QF++ + + + + +PE + ER
Sbjct: 160 ETLYPPPTLFSRDDVRNWLMGPRCREQFVIRYQSATEIYSFDSIQRIPELIYDGERAKGG 219
Query: 642 ---WTETYAVWSPLGTYLATFHWRGVALWG---WSK 731
WT+ WSP+G+YL TFH +GVALWG W K
Sbjct: 220 KRVWTDFSVQWSPMGSYLVTFHRQGVALWGGDDWDK 255
>UniRef50_Q4UA40 Cluster: Eukaryotic translation initiation factor,
putative; n=3; Piroplasmida|Rep: Eukaryotic translation
initiation factor, putative - Theileria annulata
Length = 741
Score = 78.2 bits (184), Expect = 2e-13
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Frame = +3
Query: 189 NVVVVDGCPQVGPERLEKLQSVINKIFSKF----GKIVNEYY----PTTENGLTTGYIFL 344
N+ V G P VGPE+ ++L+ V+ K +K G + + PT + T G F
Sbjct: 62 NLFSVLGLPVVGPEKHDRLRDVVRKTITKELEKKGCEIQTPFVLEIPTDGSKQTKGLAFF 121
Query: 345 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQ-PFKVQSDLQ 521
+ P A A+K N KLD H F L +F + PP F +
Sbjct: 122 TFGTPFEANMALKFINKFKLDSSHAFKAILVDNFDMIVSDDNKCVPPLKTFGFTREGIRD 181
Query: 522 WYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQE--------RPNWTETYAVWSPLG 677
W++M DQF++ + + + EP L + R W + WSP G
Sbjct: 182 WWIMGERMRDQFVIRYADKTEVYWFDSVHREPKLAYDGSRERAEGRRPWADQKVEWSPNG 241
Query: 678 TYLATFHWRGVALWGWSKF 734
+YLA + W G+AL+G + F
Sbjct: 242 SYLAVYKWAGIALYGGNNF 260
>UniRef50_Q5Y250 Cluster: PRT1p; n=8; Tremellomycetes|Rep: PRT1p -
Cryptococcus gattii (Filobasidiella gattii)
(Cryptococcusbacillisporus)
Length = 753
Score = 77.8 bits (183), Expect = 3e-13
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Frame = +3
Query: 180 GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEY---YPTTEN-GLTTGYIFLE 347
G+E ++VVD P V + ++L + + F+K G V E P G G++FL
Sbjct: 39 GFETMLVVDNIPIVDMSKKQRLLERLRQTFAKVGAPVEEESIDMPWNGTAGTNKGFVFLT 98
Query: 348 YSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIP-KEWEPPAPQPFK--VQSD- 515
Y + + A AV K + VN F D Q+++ +P E + PA K ++ D
Sbjct: 99 YPDVKEAENAVHVLEGVPFGK-NILHVNRFGDIQRFASLPIGEGDLPAGWKEKDYIEKDY 157
Query: 516 LQWYLMDPDAYDQFLVGIGTGVALQVW--QNALPEPLL-LQERP----NWTETYAVWSPL 674
L+ +L D DQ++ T V++ W +N E L L +P W E Y WSP+
Sbjct: 158 LRSWLGDLAGRDQYVTFWDTEVSIW-WNGRNGNAEILKGLDGKPVKNNKWGELYLQWSPM 216
Query: 675 GTYLATFHWRGVALWGWSK 731
GTYLA+ H GVALW K
Sbjct: 217 GTYLASLHRVGVALWSGPK 235
>UniRef50_Q8I3T1 Cluster: Eukaryotic translation initiation factor 3
subunit, putative; n=9; Plasmodium|Rep: Eukaryotic
translation initiation factor 3 subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 716
Score = 76.6 bits (180), Expect = 6e-13
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Frame = +3
Query: 183 YENVVVVDGCPQVGPERLEKLQSVINKIFSKF--GKIVNE-------YYPTTENGLTTGY 335
+ +V + G P+V E+ +L V+ K+F + KI + + PT E T G
Sbjct: 47 FPKIVTILGIPKVESEKHGRLAEVLKKLFIRHLSAKISDSSLLNMKIHMPTDEENKTKGI 106
Query: 336 IFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSD 515
F+ +++ A EAVK N KLD +H + D + + ++ P F +
Sbjct: 107 CFVTFNDSFQANEAVKILNKLKLDAKHILTTSKMDDIENIINRDEKAMPINVVGF-TREK 165
Query: 516 LQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQE--RPNWTETYAVWSPLGTYLA 689
++W+L D +QF+V + + + EP L+ + N + WS G+YL
Sbjct: 166 IRWWLYDEKCREQFIVRYDSHFEVHWFDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLV 225
Query: 690 TFHWRGVALWGWSKF 734
+FH G+ALWG F
Sbjct: 226 SFHNPGIALWGGDSF 240
>UniRef50_A0CIH2 Cluster: Chromosome undetermined scaffold_19, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_19,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 665
Score = 50.0 bits (114), Expect = 6e-05
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Frame = +3
Query: 147 DILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLT 326
D+L +PK + +++ G P+V E +KL + + K I ++ N L
Sbjct: 33 DVLVDQPKSNFISNLSILLIGLPKVKDEMKQKLITALKGFLKKNNYI--QFVDIELNNL- 89
Query: 327 TGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKV 506
G L Y N A +AV+ NN D +H L FT QK + E + P K
Sbjct: 90 -GQALLSYDNEDQAQQAVEQINNQNFDAKHQLLA--FT--QKQINTINETKEYIPIILKS 144
Query: 507 QSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETY--AVWSPLGT 680
+ +L + DP A ++ + ++L+ W N L + L Y WSPLG
Sbjct: 145 RQELLAFHKDPRAAVT-IIQEKSKLSLK-WLNPLEKKLEDNVNEKKLPPYDKLQWSPLGQ 202
Query: 681 YLATFHWRGVALWG 722
YL F +L+G
Sbjct: 203 YLVLFTENEFSLYG 216
>UniRef50_A3LXC4 Cluster: RNA recognition motif-containing protein;
n=2; Saccharomycetaceae|Rep: RNA recognition
motif-containing protein - Pichia stipitis (Yeast)
Length = 694
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/94 (27%), Positives = 43/94 (45%)
Frame = +3
Query: 240 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 419
K V+ KIFS FG + + Y P + G G+ F+ A AVK + K+D +
Sbjct: 143 KKPDVLKKIFSNFGAVFDAYIPKKKGGQMCGFAFVTMKKQAAAERAVKESVGLKIDGREV 202
Query: 420 FLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQ 521
V+L + K+ +I ++ E Q D++
Sbjct: 203 -AVDLAVEKSKWEEIKEDEEDQEDQDEDEDEDVE 235
>UniRef50_A2EIA0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 608
Score = 43.6 bits (98), Expect = 0.005
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
Frame = +3
Query: 186 ENVVVVDGCPQVGPERLEKLQSV-INKIFSKFGKIVNEYYPT-TENGLTTGYIFLEYSNP 359
+++V+V G P +++++ +N + ++ E T++G T G +F+ +
Sbjct: 6 DSIVIVIGLPITDESKIDQMSGYFLNLVKPLDPELTKEKIEVPTQDGKTIGALFIVCKDS 65
Query: 360 QNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPA-PQPFKVQSDLQWYLMD 536
+A + + DK++ + + D++KY D E A +P + WY
Sbjct: 66 DSARRLAFIGDYMQFDKKNRLRMFINNDYKKYIDSTNAPEQIAVAKPPSTPVEFSWYYTQ 125
Query: 537 PDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTE 650
PD +DQ +V G W N L E P + +
Sbjct: 126 PDMFDQ-IVYSAAGFPHVCWFNHNTAKLQQIELPQYIQ 162
>UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 886
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
QS + +F G+IV+ +P+ ++G + +LE++ P++AA AVK N KL
Sbjct: 606 QSEVKALFEDCGQIVSARFPSLKSGRERRFCYLEFTKPESAAAAVKKHNGTKL 658
>UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium
(Vinckeia)|Rep: Dentin phosphoryn - Plasmodium yoelii
yoelii
Length = 793
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
+ KIF FGKI + Y P G+ F+EY +P++A EA+ NN K+D
Sbjct: 22 VRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKEALNILNNSKID 73
>UniRef50_Q9ZQA8 Cluster: Probable polyadenylate-binding protein
At2g36660 (Poly(A)-binding protein At2g36660); n=1;
Arabidopsis thaliana|Rep: Probable polyadenylate-binding
protein At2g36660 (Poly(A)-binding protein At2g36660) -
Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCK 401
+ ++ + F++FGKIV+ EN L GY F+ + NP++A A + N K
Sbjct: 214 EDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTK 265
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 249 SVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
+V+ +F KFG IV+ T E+G + GY F+++ A A++ N+
Sbjct: 126 AVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNS 174
>UniRef50_A2F6R9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 268
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/111 (23%), Positives = 54/111 (48%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFT 440
++FS FG ++ PT E G +++Y P++A +A++ N ++ + ++ +
Sbjct: 107 EVFSNFGDVITVKIPTEEE--VKGIAYVQYLYPESAQQAIEQFNGAEIQESEINIMK-YE 163
Query: 441 DFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQV 593
QK+ I ++ +Q ++ Y+ +P FL+ GT VA +V
Sbjct: 164 SVQKHKKIKNNFDKTF-TTILIQ-NIPEYVTEPADVGAFLIDYGTVVAARV 212
>UniRef50_Q98RZ7 Cluster: Polyadenylate-binding protein; n=1;
Guillardia theta|Rep: Polyadenylate-binding protein -
Guillardia theta (Cryptomonas phi)
Length = 389
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 LEKL-QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
++KL + VI +F FGKI + + P N + G+ ++ + N ++A EA+ NN K+
Sbjct: 195 VDKLSEKVIFNLFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKI 252
>UniRef50_Q556F3 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 904
Score = 41.1 bits (92), Expect = 0.028
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTF--LV 428
+ +FSK+GK+++ G + GY F+ +S+PQ +A A++ + + + L
Sbjct: 125 LENLFSKYGKVLSSKVMIDPKGNSYGYGFVRFSSPQESAAAIEELDGYQYQNKKLLCRLS 184
Query: 429 NLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDP 539
NL+T+ S P P P+ V D L +P
Sbjct: 185 NLYTNLN--SKYPSNNLFIKPLPYDVTDDQLRKLFEP 219
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTF-LVN 431
+ K+F FGKI+ NG + F+ +S+ +A++A+ A N +++K + LV
Sbjct: 213 LRKLFEPFGKIIECKVMLDHNGQSKFAGFVRFSSELDASKAIDAMNGVRINKDSGYPLVV 272
Query: 432 LFTDFQK 452
+ D ++
Sbjct: 273 KYADTEQ 279
>UniRef50_A2EKZ8 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 220
Score = 40.3 bits (90), Expect = 0.048
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +3
Query: 219 VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNC 398
+G E ++ + +IF K+G++++ PT G + GY F+ ++ ++A +AV NN
Sbjct: 33 IGNLPFEYTEAKLKEIFGKYGEVLDSKIPTNPAGRSRGYGFVSFALKEDAQKAVDELNNK 92
Query: 399 KLD 407
+++
Sbjct: 93 EME 95
>UniRef50_Q2GSX8 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=6;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Chaetomium globosum (Soil fungus)
Length = 783
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
++ F+ FG I++ ENG + GY F+ Y + AA+A+K NN L+++ ++
Sbjct: 169 LHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYV 225
>UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 1035
Score = 39.9 bits (89), Expect = 0.064
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 219 VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
VG + VI FS FG I + +G + GY F+EY N ++AA+A+++ N
Sbjct: 592 VGSLHFSLTEDVIRATFSVFGNIKSLALGKDASGKSKGYAFIEYDNQESAAKALQSMTN 650
>UniRef50_A5K5L8 Cluster: Clustered-asparagine-rich protein,
putative; n=3; Plasmodium|Rep: Clustered-asparagine-rich
protein, putative - Plasmodium vivax
Length = 292
Score = 39.9 bits (89), Expect = 0.064
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 446
F FG +V+ NG GY F+ ++NP++A A+K + + +H V L
Sbjct: 175 FQHFGYVVSARIQRDSNGRNKGYGFVSFNNPESALNAIKGMHGFYVSGKH-LKVQLKKGE 233
Query: 447 QKYSDIPKEWEPP-AP-QPFKVQSDL 518
+ Y + +P AP QP+ VQ +
Sbjct: 234 EHYVQLNAPAQPQLAPTQPYTVQQPI 259
>UniRef50_A5DNE5 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetaceae|Rep: Putative uncharacterized protein
- Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 713
Score = 39.9 bits (89), Expect = 0.064
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ K F +FG + + Y P + G +G+ F+ A +AVK + K+D + V+L
Sbjct: 163 LKKTFLRFGAVFDAYIPRKKGGQMSGFAFITMKKQAAADKAVKESVGLKIDGREV-AVDL 221
Query: 435 FTDFQKYSDIPKEWEPPAPQPFKVQSD 515
+ K+ I +E P + Q D
Sbjct: 222 AVEKSKWEAIKEEEPKPEKEDDPEQKD 248
>UniRef50_A5B3Z9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 544
Score = 39.5 bits (88), Expect = 0.084
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
+ + + F +FGKI + ENG++ G+ F+ + +P++A A++A N +L
Sbjct: 224 EEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEALNGLQL 276
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTF 422
+ +F KFG I++ TE+G + GY F+++ + + A A++ N +D + +
Sbjct: 136 LQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIY 191
>UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1057
Score = 39.5 bits (88), Expect = 0.084
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
I KIF FG+I + Y P G+ F+EY PQ A EA+ N+ K+D
Sbjct: 22 IRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALTILNHSKID 73
>UniRef50_UPI000150A965 Cluster: hypothetical protein
TTHERM_00443100; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00443100 - Tetrahymena
thermophila SB210
Length = 734
Score = 39.1 bits (87), Expect = 0.11
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Frame = +3
Query: 159 QKPKESDGYENVVVVDGCPQVGPERLEKLQSVI-NKIF---SKFGKIVNEYYPTTENGLT 326
QKP Y ++V G P + E+ ++ NKI + KI + +G
Sbjct: 41 QKPFLDRSYHEFIIVTGLPNTEAAKTEQFKTFFQNKILQPTALLEKIKVIEFQLDNDGNF 100
Query: 327 TGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPP 485
G L + N NA E + N K K +L++ FQ+ D P E+ P
Sbjct: 101 QGICILAFDNATNAQEGLNKLNGLKFMKYQLSAYSLYS-FQQALDCPDEFTAP 152
>UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Rep:
At4g09040 - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
I +F K+G +++ + G +F+E ++P+ AA A+K+ +C+ + + V+
Sbjct: 110 IRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRR-LKVDY 168
Query: 435 FTDFQKYSDIPKEWEPPAP 491
+K + P+E P P
Sbjct: 169 AKTKKKKTYAPRETPSPVP 187
>UniRef50_Q55BM9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 521
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 264 IFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
+F +FG+IVN + + G + GY F+ + NP+NA EA+K N
Sbjct: 40 LFEQFGEIVNTKVMVNIKTGNSLGYGFVRFLNPENACEAIKNMN 83
>UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=2;
Eukaryota|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 673
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 246 QSVINKI----FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
QS+ NK F+ FG I++ T ENG + G+ F+ YS + A A+KA N L+ +
Sbjct: 143 QSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDK 202
Query: 414 HTFL 425
++
Sbjct: 203 KVYV 206
>UniRef50_Q9UT83 Cluster: Meiotically up-regulated gene 28 protein;
n=1; Schizosaccharomyces pombe|Rep: Meiotically
up-regulated gene 28 protein - Schizosaccharomyces pombe
(Fission yeast)
Length = 609
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
+ ++FSKFG+I + YP+TE ++ GY F+ +S+P A +A+ N K+ F+
Sbjct: 437 LEELFSKFGRIKSCTLASYPSTE--ISKGYGFVSFSHPFEAVQAINTLNGVLFGKKRLFV 494
>UniRef50_UPI00006CFA0A Cluster: hypothetical protein
TTHERM_00421020; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00421020 - Tetrahymena
thermophila SB210
Length = 756
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
++F KFG +++ T +G + GY F+ Y++P A +A++ N ++ K+
Sbjct: 679 RLFKKFGDLLSARVITRPDGSSKGYGFVSYTSPDGAQQAIQQMNGLQVGKK 729
>UniRef50_Q5DH08 Cluster: SJCHGC05090 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05090 protein - Schistosoma
japonicum (Blood fluke)
Length = 274
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
+ K+F ++G +V+ T NG+ G+ ++E+ N +A+ A+ ATN
Sbjct: 116 LEKLFRQYGNVVSIRLVTFRNGVPKGHAYIEFENADDASRALIATN 161
>UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 245
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 231 RLEKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
R V+ + F KFGKI + Y P N G+ F+E+ + +A +AV+A +N +LD
Sbjct: 15 RFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRAMDNTELD 74
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 38.7 bits (86), Expect = 0.15
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = +3
Query: 156 EQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGY 335
E++P+ S EN +G E + K+FS+FG++ + G++ G+
Sbjct: 134 ERRPRRSR--ENNTPPHNTLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNRGMSRGF 191
Query: 336 IFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQ-- 509
++E+ + +A A+ + + ++ LV + + SD PK PPA P K
Sbjct: 192 GYVEFKSIDDAQTAIDNLDMQVFEGRN--LVVQYHRAKSDSDRPKREFPPANLPSKTLFI 249
Query: 510 SDLQWYLMDPDAYDQF 557
++ + + D D D F
Sbjct: 250 GNMSFEMSDKDLNDLF 265
>UniRef50_UPI000049913F Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 284
Score = 38.3 bits (85), Expect = 0.19
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 428
K+FS GK+++ P +G++ Y +LE + +N +A+ + N ++ K +V
Sbjct: 76 KLFSTVGKVISITIPVNHSGISKKYAYLEMDSIENKNKAIMSFNGTRIGKNEVMVV 131
>UniRef50_Q7RL66 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 330
Score = 38.3 bits (85), Expect = 0.19
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 446
F FG +V+ NG GY F+ ++NP++A A+K + + +H V L
Sbjct: 214 FQHFGYVVSARIQRDANGRNKGYGFVSFNNPESALNAIKGMHGFYVSGKH-LKVQLKKGE 272
Query: 447 QKYSDI--PKEWEPPAPQPFKVQSDL 518
+ Y + P + + QP+ VQ +
Sbjct: 273 EHYIQLNTPAQPQLTPAQPYTVQQPI 298
>UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;
n=6; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 890
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 428
+ K FSKFGK+ T ++G+ G ++++ N +A AV +N ++ +HT V
Sbjct: 729 LEKTFSKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATRAVMGLDNTQIG-EHTITV 785
>UniRef50_Q8IIG9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 200
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCK 401
KIF ++GKI + N T Y F+EY NP++A + ++ N K
Sbjct: 27 KIFEEYGKISDIDIKYNRNSNGTNYAFIEYENPKSAEKTIQKRNGKK 73
>UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 790
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
++ F+ FG I++ E+G + GY F+ Y + AA+A+K N L+++ F+
Sbjct: 165 LHDTFAAFGNILSCKVAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFV 221
>UniRef50_A7AV37 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 292
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVK 383
F+ FG +V+ NG G+ F+ Y NPQ+AA AV+
Sbjct: 232 FTPFGNLVSAKVQKDANGANAGFGFVSYDNPQSAAAAVR 270
>UniRef50_Q55XM4 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 817
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
+ + FS+FG++++ ++ + GY F+ + P+ AA AVKA N + +Q
Sbjct: 394 LEETFSQFGRVISARVMRDDHQRSRGYGFVSFYTPEEAACAVKAMNGTQFGRQ 446
>UniRef50_UPI00006CB791 Cluster: hypothetical protein
TTHERM_00348880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00348880 - Tetrahymena
thermophila SB210
Length = 474
Score = 36.7 bits (81), Expect = 0.59
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
++FS +G I++ +NG + GY F+ ++ P AA A+K N L
Sbjct: 400 ELFSGYGNIISITICRKQNGESRGYGFVSFNQPYEAAHAIKELNGLNL 447
>UniRef50_Q7RNK1 Cluster: Ribonucleoprotein homolog
F21B7.26-Arabidopsis thaliana-related; n=5;
Plasmodium|Rep: Ribonucleoprotein homolog
F21B7.26-Arabidopsis thaliana-related - Plasmodium
yoelii yoelii
Length = 507
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATN 392
E +Q+ + FS FG I++ Y T ++ G G+ F+ Y N +A AVK N
Sbjct: 408 EWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSAINAVKYMN 460
>UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2;
Theileria|Rep: Splicing factor, putative - Theileria
parva
Length = 644
Score = 36.7 bits (81), Expect = 0.59
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
+N++FS FG I++ T++G + GY ++ + A EA+ N ++ Q
Sbjct: 439 LNQLFSPFGNIIDVALARTDDGNSKGYAYIRFKRWNEAKEALNVMNGFDINGQ 491
>UniRef50_A2E4Y0 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 162
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = +3
Query: 234 LEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
L+ + I K FS++G I+N + E G F+ + +A +K NN + +
Sbjct: 40 LDMDEKAITKYFSQYGTIINTFLMVDEAQTFKGMAFITFQKRSDAKYCIKDLNNANFEGK 99
Query: 414 HTFLVNLFTDFQKYSDIPKEWEPPAP 491
H + D ++ E AP
Sbjct: 100 HLVVREAKNQTNTVKDPNRKKEKSAP 125
>UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_79,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 435
Score = 36.7 bits (81), Expect = 0.59
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +3
Query: 255 INKIFSKFG--KIVNEYYPTTENG-LTTGYIFLEYSNPQNAAEAVKATNNCKL-DKQ 413
+ K+ FG K N TT N ++ GY F EY N + A+A+KA NN ++ DK+
Sbjct: 219 VMKLIQSFGTTKYFNLVKDTTSNTEISKGYCFFEYENTGSTAKALKALNNLQIGDKK 275
>UniRef50_P04147 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=14;
Dikarya|Rep: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein) - Saccharomyces
cerevisiae (Baker's yeast)
Length = 577
Score = 36.7 bits (81), Expect = 0.59
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
FS FG I++ T ENG + G+ F+ + A EA+ A N L+ Q ++
Sbjct: 146 FSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198
>UniRef50_Q259G3 Cluster: H0124B04.13 protein; n=5; Oryza
sativa|Rep: H0124B04.13 protein - Oryza sativa (Rice)
Length = 913
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 IFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
+F FG++ N GL+ GY F++YS+P +AAEAV N +D
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVD 371
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 261 KIFSKFGKIV-NEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
++F FG+IV + GL+ GY F++YS+P+ A+EA+K N
Sbjct: 227 ELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMN 271
>UniRef50_Q4N1R5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 954
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 PERLEKLQSVINKIFSKFGKIVNEY-YPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
P +L L + NKI+S+F +V +Y + + NG+ I+ ++NPQ E + TN
Sbjct: 592 PIKLFPLSDLSNKIYSEFSNMVYDYRWSSFNNGMNPNEIWSFFTNPQFRLEIKRDTN 648
>UniRef50_Q0IGP7 Cluster: SD20656p; n=6; Drosophila
melanogaster|Rep: SD20656p - Drosophila melanogaster
(Fruit fly)
Length = 708
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTT--ENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
I +IF FG + +P + GY F+EYS P++ A A+K N ++D
Sbjct: 551 ITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGGQID 603
>UniRef50_A7SN30 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 335
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
Q I KIF G + + + G + GY F+ Y NP +A +AV+ N +L +
Sbjct: 23 QEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNK 79
>UniRef50_Q1MTR2 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 243
Score = 36.3 bits (80), Expect = 0.78
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENG-LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
I +IF +G I + + P + L GY ++EY AA AV NN +LD + F+
Sbjct: 115 IAEIFGIYGLIDHIFMPIYKKSELNKGYCYIEYVYHDQAANAVDKMNNAELDGEELFV 172
>UniRef50_A7TK65 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 760
Score = 36.3 bits (80), Expect = 0.78
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 318 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 431
G + GY F+ + NP +A+ A+ T+ KLDK HT V+
Sbjct: 579 GTSKGYGFVYFKNPIDASRAILETDRRKLDKDHTLHVS 616
>UniRef50_Q8SR30 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=1;
Encephalitozoon cuniculi|Rep: Polyadenylate-binding
protein, cytoplasmic and nuclear (Poly(A)- binding
protein) - Encephalitozoon cuniculi
Length = 502
Score = 36.3 bits (80), Expect = 0.78
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVK 383
++ ++GK+ + ++P +NG G+ F + N ++A A+K
Sbjct: 209 ELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIK 249
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 36.3 bits (80), Expect = 0.78
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Frame = +3
Query: 264 IFSKFGKIVNEYYPT-TENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFT 440
+F KFG+I + E+G + G+ F+ +++ NAA AV+A N+ Q ++
Sbjct: 255 LFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQK 314
Query: 441 DFQKYSDIPKEWEPPAPQPFKVQSDLQWYL------MDPDAYDQFLVGIGTGVALQVWQN 602
++ ++ K++E + + Y+ +D + + GT + +V ++
Sbjct: 315 KHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
Query: 603 ALPE 614
PE
Sbjct: 375 FAPE 378
>UniRef50_UPI0000498A68 Cluster: RNA-binding protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 540
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
Q I F K+GKI N TT Y F++Y N + +EA++ NN D Q
Sbjct: 184 QKTIESKFKKYGKIERITVINRPNE-TTAYAFVKYDNTLSPSEAIQTENNSDWDGQ 238
>UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Rep:
At2g47310 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
+N++FS++G I + Y + + GY F+++S + A A+KA N
Sbjct: 223 VNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALN 268
>UniRef50_Q7RDM4 Cluster: PolyA binding protein-related; n=5;
Plasmodium (Vinckeia)|Rep: PolyA binding protein-related
- Plasmodium yoelii yoelii
Length = 859
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
FS FG I++ T E G + Y F+ Y + ++A EA++ N +L ++ ++
Sbjct: 124 FSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>UniRef50_A7SFY3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 817
Score = 35.9 bits (79), Expect = 1.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
+S I ++FSK G + T G GY ++EY +A+ AV + ++ K T
Sbjct: 707 ESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLDKTEV-KGRTIS 765
Query: 426 VNLFTDFQKYSDIPKEWEPPAPQP 497
V L + P++ PP P P
Sbjct: 766 VALSNPPTRRGP-PRQEHPPPPPP 788
>UniRef50_A7AT74 Cluster: RNA-binding protein P22H7.02c, putative;
n=1; Babesia bovis|Rep: RNA-binding protein P22H7.02c,
putative - Babesia bovis
Length = 702
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 261 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
K+FS +G + + P + G+ F+EYS+ Q +A AV++ + L +H L
Sbjct: 636 KLFSFYGNVKSVRIPKSLKSNNRGFAFVEYSSKQESARAVESLQHSHLYGRHLVL 690
>UniRef50_A1EAA0 Cluster: Polyadenylate-binding protein; n=3;
Plasmodium|Rep: Polyadenylate-binding protein -
Plasmodium falciparum
Length = 875
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
FS FG I++ T E G + Y F+ Y + ++A EA++ N +L ++ ++
Sbjct: 124 FSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYV 176
>UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_9, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 597
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVK 383
+S I ++FS G+I+ T +NG + GY F+ ++ + A +A+K
Sbjct: 80 ESNIREVFSTCGEIIEVRMMTDQNGKSKGYCFVRFTTKEAANKAIK 125
>UniRef50_Q550X7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 78
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 416
+ ++ FS +G+I + + E G++ GY ++EY+N ++A +A+ N+ + H
Sbjct: 17 KEILKTKFSVYGEIQSLVFVKGKETGISEGYAYIEYNNKEDAVKAIDDLNDQPFEGNH 74
>UniRef50_Q54B40 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 886
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 243 LQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEA 377
+ S+ N IFSKFG + P + G T G+ F+E+ N NA A
Sbjct: 29 INSIFN-IFSKFGPLERCEIPENKFGKTRGFAFIEFENKANAYTA 72
>UniRef50_Q4X3X5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 45
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 134 FFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 9
FFR EI ++ IRF + LI++++ + FFIAFF +F
Sbjct: 2 FFRIFDEIRNILLIRFCIPITKLIISVKLYALFFIAFFFRYF 43
>UniRef50_Q234T4 Cluster: Splicing factor, CC1-like family protein;
n=2; Tetrahymena thermophila SB210|Rep: Splicing factor,
CC1-like family protein - Tetrahymena thermophila SB210
Length = 588
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
+ IF K+G I + P G G+ +L + +A EA+K N KL Q
Sbjct: 323 LKDIFQKYGDIESVELPVNAQGKCLGFGYLTFKKKSDAHEAIKMMNGFKLQDQ 375
>UniRef50_A4V6M1 Cluster: Bruno-like protein; n=1; Dugesia
japonica|Rep: Bruno-like protein - Dugesia japonica
(Planarian)
Length = 402
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN-NCKLDKQHTFLVN 431
+ +F+KFGKI +NG + G F+++ N +A A+ A + + K++ + LV
Sbjct: 53 VQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQKMEGASSSLVV 112
Query: 432 LFTDFQKYSDIPK 470
F D K I K
Sbjct: 113 KFADTDKQKQIRK 125
>UniRef50_Q4P6W4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 228
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 267 FSKFGKIVNEYY----PTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
FSKFGKI + + G GY F+EY++PQ A +AV +N
Sbjct: 63 FSKFGKISKLDFLFHKSGPQRGQPRGYAFVEYASPQEAMQAVAGAHN 109
>UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;
n=1; Pichia stipitis|Rep: U4/U6 snRNA-associated
splicing factor - Pichia stipitis (Yeast)
Length = 837
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
Q I +F + GK+ + +P+ + T + ++EY N +A +AVK N
Sbjct: 546 QGCIRLMFEQIGKLASIRFPSQRSNHTRRFCYVEYENANSALQAVKIYN 594
>UniRef50_A1CEY1 Cluster: RNA binding protein (Rbm8A), putative;
n=7; Pezizomycotina|Rep: RNA binding protein (Rbm8A),
putative - Aspergillus clavatus
Length = 159
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
E + + +F+++G+I N G GY +EYS A++A+KA N KL
Sbjct: 52 EASEEDVTDLFAEYGEIKNFSLNLDRRTGYVKGYALIEYSTLPEASDAIKALNGTKL 108
>UniRef50_Q13310 Cluster: Polyadenylate-binding protein 4
(Poly(A)-binding protein 4) (PABP 4) (Inducible
poly(A)-binding protein); n=244; Eukaryota|Rep:
Polyadenylate-binding protein 4 (Poly(A)-binding protein
4) (PABP 4) (Inducible poly(A)-binding protein) - Homo
sapiens (Human)
Length = 644
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 435 FTDFQKYSDIPKEWE 479
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>UniRef50_UPI0000584283 Cluster: PREDICTED: similar to RIKEN cDNA
1810073H04 gene; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to RIKEN cDNA 1810073H04 gene -
Strongylocentrotus purpuratus
Length = 595
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 180 GYENVVVVDGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 356
G+E GC VG + + + +F K GKI +G GY F+ Y+
Sbjct: 48 GWEGAQPSRGCEVFVGKIPRDLFEDELVPVFMKIGKIYELRLMMDFSGSNRGYAFVMYTT 107
Query: 357 PQNAAEAVKATNNCKLDK 410
++ +AVK NN ++ K
Sbjct: 108 REDGKKAVKQLNNYEIRK 125
>UniRef50_UPI00004982EB Cluster: hypothetical protein 12.t00007;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 289
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYI-FLEYSNPQNAAEAVKATNNCKLDKQHTF 422
++ + ++FS +G ++N + G Y F+EY P++AA+A++ ++D+
Sbjct: 15 ENKLKELFSPYGNVINSTIKKSSKGTNDFYYAFIEYDRPEDAAKALR-----EMDQHELA 69
Query: 423 LVNLFTDFQKYSDIPKEWEPPAPQPF 500
L F K PK+ P +PF
Sbjct: 70 GKRLNVKFAK----PKDGRPYLQKPF 91
>UniRef50_Q8ILZ7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 514
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVKATN 392
E +Q+ + FS FG I++ + T + G G+ F+ Y N +A AVK N
Sbjct: 415 EWIQTDLLSAFSPFGNIISAHIATERDTGRNRGFAFVSYDNVDSAINAVKYMN 467
>UniRef50_Q4P9A2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1081
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
F +FG IV+ +NG + + F+ ++ P A +A++A +N KL
Sbjct: 341 FKRFGHIVSARVMRDDNGKSREFGFVSFTTPDEAQQALQAMDNAKL 386
>UniRef50_Q15287 Cluster: RNA-binding protein with serine-rich
domain 1; n=47; Eumetazoa|Rep: RNA-binding protein with
serine-rich domain 1 - Homo sapiens (Human)
Length = 305
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 428
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 429 NLFTDFQKYSDIPKEWEPP 485
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_225, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 751
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
++ + ++F+ FGKI + G++ GY F+++ NP +AA A+ + K+D
Sbjct: 526 ENCLAELFAPFGKIAKTKVIKDRATGISKGYGFVKFENPAHAALALSHMHGYKID 580
>UniRef50_Q54WI5 Cluster: SAP DNA-binding domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: SAP DNA-binding
domain-containing protein - Dictyostelium discoideum AX4
Length = 1009
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 252 VINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 431
++ K+FS FGKI + G G+ F++Y+N ++A +A + N L K + VN
Sbjct: 504 ILRKVFSPFGKIKDCNVVPNYYGQPRGFAFIDYNNVEDAEKAQRMMNEKDL-KGYKIRVN 562
>UniRef50_Q09584 Cluster: Rnp (Rrm rna binding domain) containing
protein 7; n=2; Caenorhabditis|Rep: Rnp (Rrm rna binding
domain) containing protein 7 - Caenorhabditis elegans
Length = 332
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 219 VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNC 398
VG E +S + + F +GKI E G GY F+EYS+ A K +
Sbjct: 108 VGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGI 167
Query: 399 KLD 407
K+D
Sbjct: 168 KVD 170
>UniRef50_Q7SG09 Cluster: Multiple RNA-binding domain-containing
protein 1; n=6; Fungi/Metazoa group|Rep: Multiple
RNA-binding domain-containing protein 1 - Neurospora
crassa
Length = 827
Score = 34.7 bits (76), Expect = 2.4
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 416
E + + +FS +GK+V P N + G+ F E+S A EA+ A N+ K H
Sbjct: 714 EVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFS---TAKEALNAFNSLK--DTH 768
Query: 417 TFLVNLFTDFQKYSDIPKE 473
L DF + DI E
Sbjct: 769 ILGRRLVIDFAQAEDIDPE 787
>UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF14504, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1719
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNN 395
I ++FS+ G +V P ++ G + G+ F+E+ + A EA++A NN
Sbjct: 1276 IERVFSQCGTVVYVSVPRYKSSGDSKGFAFVEFEKAEEAREAIQALNN 1323
>UniRef50_Q9SN69 Cluster: Putative uncharacterized protein
F24J7.162; n=2; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F24J7.162 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 772
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 416
E + + ++FS FG+I + P G GY F+E+ Q A A KA + +H
Sbjct: 668 EATKRELRQLFSPFGQIKSMRLPKKNIGQYAGYAFVEFVTKQEALNAKKALASTHFYGRH 727
Query: 417 TFL 425
L
Sbjct: 728 LVL 730
>UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 312
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 204 DGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAV 380
D VG + + ++ ++F + G +VN Y P L GY F+E+ + ++A A+
Sbjct: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
Query: 381 KATNNCKL 404
K N KL
Sbjct: 84 KVLNMIKL 91
>UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1119
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ K+FS FG + + P + GY F+E+ + + + A+++ + L +H +++
Sbjct: 999 LRKLFSAFGNVKSVRIPKNVYNRSRGYAFIEFMSKKESCNAIESLQHTHLYGRH-LIIDF 1057
Query: 435 FTDF 446
DF
Sbjct: 1058 ADDF 1061
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
I K+F+ +G+I + P NG G+ F+E+ + A A++A N +H L
Sbjct: 811 IRKLFTAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEALGNSHFYGRHLVL 867
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAV 380
+ K+FSKFGKI + P ++ + G F+ Y P+NA +A+
Sbjct: 377 LEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQAL 419
>UniRef50_Q22Z94 Cluster: RNA-binding motif protein 8; n=1;
Tetrahymena thermophila SB210|Rep: RNA-binding motif
protein 8 - Tetrahymena thermophila SB210
Length = 124
Score = 34.3 bits (75), Expect = 3.2
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK-LDK 410
E I F +FG+I N + +G GY ++Y N Q+A +A+K N LD+
Sbjct: 47 ETTDDQIYDAFGEFGEIKNCHLNLDRRSGYVKGYALVQYENLQHAQDAIKGLNGTTILDR 106
Query: 411 QHT 419
Q T
Sbjct: 107 QIT 109
>UniRef50_Q2U6F2 Cluster: RNA-binding protein RBM8/Tsunagi; n=9;
Pezizomycotina|Rep: RNA-binding protein RBM8/Tsunagi -
Aspergillus oryzae
Length = 160
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
E + + +F+++G+I N G GY +EYS A EA+K N KL
Sbjct: 53 ESSEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEATEAIKNLNGTKL 109
>UniRef50_Q4N6G9 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 268
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
F FG +++ G G+ F+ Y NPQ+A A+K N
Sbjct: 174 FKHFGNVISARVQRDSAGRNRGFGFISYDNPQSAVVAIKNMN 215
>UniRef50_Q1ZXB1 Cluster: CCHC zinc finger domain-containing
protein; n=1; Dictyostelium discoideum AX4|Rep: CCHC
zinc finger domain-containing protein - Dictyostelium
discoideum AX4
Length = 312
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 219 VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNC 398
+G +E Q +N FSK+G I T NG Y F+EY ++A +A+KA N
Sbjct: 5 IGRLSVETTQKNLNDHFSKYGTITRNDVKKT-NGRC--YAFVEYKERRDADDALKALNGT 61
Query: 399 KL 404
L
Sbjct: 62 TL 63
>UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor; n=1;
Yarrowia lipolytica|Rep: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor -
Yarrowia lipolytica (Candida lipolytica)
Length = 621
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 404
I +IF FG I + G + GY F++Y NP +A A++ N +L
Sbjct: 462 IIQIFEAFGPIEFADLQKEKTGKSKGYCFIQYVNPDDAKTALEKMNGFEL 511
>UniRef50_O60176 Cluster: Uncharacterized RNA-binding protein
C23E6.01c; n=3; Schizosaccharomyces pombe|Rep:
Uncharacterized RNA-binding protein C23E6.01c -
Schizosaccharomyces pombe (Fission yeast)
Length = 473
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTF 422
++ I ++++ GK V + G+ GY F+E+++P A+ A+ N H F
Sbjct: 106 EAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAMSMNNKPIPGTNHLF 165
Query: 423 LVN 431
+N
Sbjct: 166 KLN 168
>UniRef50_P36629 Cluster: Splicing factor U2AF 59 kDa subunit; n=1;
Schizosaccharomyces pombe|Rep: Splicing factor U2AF 59
kDa subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 517
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 228 ERLEKLQSVINKIFSKFGKIVNEYYP----TTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
+ E + + FS +G +++ P T +GL TG +F+ YS+ ++A A++
Sbjct: 435 QEYEDIYESVKTQFSNYGPLIDIKIPRSIGTRNSGLGTGKVFVRYSDIRSAEVAMEEMKG 494
Query: 396 CKLD 407
CK +
Sbjct: 495 CKFN 498
>UniRef50_UPI000155D313 Cluster: PREDICTED: similar to integrin
alpha E2; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to integrin alpha E2 - Ornithorhynchus anatinus
Length = 1679
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 156 EQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGK 284
EQ+ E G E +V+DG + PE EK + I I ++F K
Sbjct: 149 EQEMDEDTGTEIAIVLDGSGSINPEDFEKAKDFIFNIMTRFYK 191
>UniRef50_UPI000150A2AA Cluster: RNA binding protein; n=1;
Tetrahymena thermophila SB210|Rep: RNA binding protein -
Tetrahymena thermophila SB210
Length = 516
Score = 33.5 bits (73), Expect = 5.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL--DKQH 416
+ I +F+K GK+V+ + T E L GY F+E+ + AE + N +L Q+
Sbjct: 54 EQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQ-AERILMNYNQQLIPGTQN 112
Query: 417 TFLVN 431
TF +N
Sbjct: 113 TFRMN 117
>UniRef50_UPI0000162F82 Cluster: PAB1 (POLY(A) BINDING PROTEIN 1);
RNA binding / translation initiation factor; n=1;
Arabidopsis thaliana|Rep: PAB1 (POLY(A) BINDING PROTEIN
1); RNA binding / translation initiation factor -
Arabidopsis thaliana
Length = 407
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ ++FS+FG I + NG++ G F+E+S + A++A+ N + + ++
Sbjct: 239 LEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLA 298
Query: 435 FTDFQKYSDIPKEWEPPAPQP 497
Q + ++ P P P
Sbjct: 299 QCKEQHKLHLQTQFNNPPPSP 319
>UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 865
Score = 33.5 bits (73), Expect = 5.5
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ +IFSKFG ++ P +G G+ F+++ + AE +A N K + V+
Sbjct: 140 LKQIFSKFGTVLETRIPLKPDGKKKGFAFVQF-KCVSEAEKARAAMNRKAIRDRPVEVDW 198
Query: 435 FTDFQKYSDIPKEWEPP 485
T + +D P++ E P
Sbjct: 199 TTSNTESAD-PEDTEEP 214
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL-DKQ 413
+ +IFS+FG ++ P +G G+ F+ + A +A+ A N K+ D+Q
Sbjct: 252 LKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTAMNGKKIKDRQ 305
>UniRef50_A6PPI3 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 823
Score = 33.5 bits (73), Expect = 5.5
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 465 PKEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNA-LPEPLLLQERPN 641
P + P PQPF + + + W L PD + F G G +++ + A P L++ER +
Sbjct: 113 PADRNPGGPQPFALDAAVSW-LGRPDPKNPFFKGEGFDTIIELARRAGCP---LVRERLS 168
Query: 642 WTET 653
W ET
Sbjct: 169 WGET 172
>UniRef50_A3C5F0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 470
Score = 33.5 bits (73), Expect = 5.5
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 204 DGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAV 380
D VG + + ++ ++F + G +VN Y P L GY F+E+ + ++A A+
Sbjct: 24 DATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
Query: 381 KATNNCKL 404
K N KL
Sbjct: 84 KILNMIKL 91
>UniRef50_A3AVD4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 611
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
++ FS FG I++ T E G + G+ F++Y + A A+K+ N ++ + ++
Sbjct: 142 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 198
>UniRef50_Q9W158 Cluster: CG4612-PA; n=2; Sophophora|Rep: CG4612-PA
- Drosophila melanogaster (Fruit fly)
Length = 307
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL-DKQHTFLVN 431
+ ++F +G+I + E G + + F+ Y NPQ+A AV + +L D + ++
Sbjct: 219 LREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVAR 278
Query: 432 LFTDFQKYSDIPKEWE 479
+ ++ +I ++ E
Sbjct: 279 ALSKAERQQEINRKLE 294
>UniRef50_Q8IEH4 Cluster: Putative uncharacterized protein
MAL13P1.72; n=3; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.72 - Plasmodium
falciparum (isolate 3D7)
Length = 1205
Score = 33.5 bits (73), Expect = 5.5
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 228 ERLEKLQSVINKIFSKFGKIVNEYYPTT--ENGLTTGYIFLEYSNPQNAAEAVKATNNCK 401
E+L+K ++++ +K K N Y NG Y F N N E V TN+
Sbjct: 294 EKLQKYYEQLSRVNNKIDKDGNHIYNNDFLNNGKYINYTFNNLFNSNNLIENVDNTNSFI 353
Query: 402 LDKQHTFLVNLFTDFQKY 455
D +H N F +F Y
Sbjct: 354 SDHRHNNF-NNFNNFNNY 370
>UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 767
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 425
+ K+FS FG I N P + GY F+E+ + A+ A + L +H +
Sbjct: 644 LKKLFSAFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLII 700
>UniRef50_Q4FW55 Cluster: Poly(A) binding protein, putative; n=6;
Trypanosomatidae|Rep: Poly(A) binding protein, putative
- Leishmania major strain Friedlin
Length = 594
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
+ ++FSKFG++ E G + GY + + ++A +AV+ + ++D Q
Sbjct: 111 LKEMFSKFGRLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQ 163
>UniRef50_A7ST95 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 835
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVK 383
+ K+FS+FGK++ P + NG G+ F+E+ + Q A V+
Sbjct: 131 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQ 174
>UniRef50_A2F3S3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 257
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 231 RLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDK 410
++E L S + +IF K G + N Y T G ++ +SN E TN+ K +
Sbjct: 153 KVENLTSGVKRIFHKNGDVSNVYRDGTMKTSHKGIVYTFFSNGDKQQEFPDGTNSYKYAQ 212
Query: 411 QHTFLVN 431
+ VN
Sbjct: 213 NNAIEVN 219
>UniRef50_O94359 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 116
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
+S++ F FG+I++ E + Y F+E+ P++A EA++ N
Sbjct: 19 ESLLYNAFIPFGEIISVALHRKEKAVDRSYAFVEFDEPEDAKEAMENMN 67
>UniRef50_O74400 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 674
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
FSKFGK+ PT G G+ F+ + + A EA+ + N ++D
Sbjct: 128 FSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNSLNGTEID 174
>UniRef50_UPI00006CEB5E Cluster: Isoleucyl-tRNA synthetase; n=1;
Tetrahymena thermophila SB210|Rep: Isoleucyl-tRNA
synthetase - Tetrahymena thermophila SB210
Length = 1166
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 468 KEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPN 641
+EW P P F + ++ Q YL++P A + ++G+ Q+W E LL Q+ N
Sbjct: 563 QEWGIPIPIFFYINTNQQKYLLEP-AVVKHIIGLYEQFGSQIWHQYSIEELLPQKYKN 619
>UniRef50_Q2L5Q0 Cluster: LexA repressor; n=5; Clostridium
perfringens|Rep: LexA repressor - Clostridium
perfringens
Length = 176
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 258 NKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLF 437
N +F K K+ N+Y T +N L I +E N K + L + HTF+ +F
Sbjct: 99 NDVFPK--KVTNDYIVTVDNILPDDIIIIEKVNSLE-----KDSIGLLLFENHTFIKKIF 151
Query: 438 TDFQKYSD 461
+D++K D
Sbjct: 152 SDYEKVYD 159
>UniRef50_A7RGY6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 189
Score = 33.1 bits (72), Expect = 7.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 321 LTTGYIFLEYSNPQNAAEAVKATNNCKL 404
L T Y F+EY +P++A EA++ NN KL
Sbjct: 37 LKTAYGFIEYEDPRDAEEAMRRENNRKL 64
>UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2;
Eukaryota|Rep: RNA binding protein, putative - Plasmodium
vivax
Length = 1127
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ K+FS FG I + P + GY F+E+ + A+++ + L +H +++
Sbjct: 1002 LRKLFSAFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRH-LIIDF 1060
Query: 435 FTDF 446
DF
Sbjct: 1061 ADDF 1064
>UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 656
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
+ +F K+G + + P G +G+ F+EY P+ A A +N
Sbjct: 207 LKTVFEKYGTVSSIKIPKQRGGSLSGFCFVEYQLPEEAIRAFSELDN 253
>UniRef50_Q751F6 Cluster: AGL250Wp; n=5; Saccharomycetales|Rep:
AGL250Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 729
Score = 33.1 bits (72), Expect = 7.3
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 434
+ KIF +FG + P +G G+ F+ N +A++ K+D + V+
Sbjct: 147 LKKIFGRFGVVAEASIPRKADGKLCGFAFVTMKKLSNCRKAIEECKGLKIDGREV-AVDF 205
Query: 435 FTDFQKYSDIPK 470
K+ D K
Sbjct: 206 AVQKSKWEDYKK 217
>UniRef50_Q15717 Cluster: ELAV-like protein 1; n=28; Tetrapoda|Rep:
ELAV-like protein 1 - Homo sapiens (Human)
Length = 326
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 401
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>UniRef50_UPI0000498AD7 Cluster: enhancer binding protein 2; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: enhancer binding
protein 2 - Entamoeba histolytica HM-1:IMSS
Length = 320
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
+ + F +FGK+V+ +G + G+ ++E+ ++A +A++ NN
Sbjct: 19 LKEFFERFGKVVDVVIMERYDGASKGFGYVEFDTEESAQKALREGNN 65
>UniRef50_Q31NN8 Cluster: ATP-dependent DNA helicase, RecQ family;
n=3; Cyanobacteria|Rep: ATP-dependent DNA helicase, RecQ
family - Synechococcus sp. (strain PCC 7942) (Anacystis
nidulans R2)
Length = 487
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 550 TSSLLALGLVWLSRCGRMHYLNPYCYRRDQTGPKPMPSGHL 672
+S+ L L L +L R G++ +L+P+ YRR + P P P+ L
Sbjct: 405 SSNELDLALAYLQRLGQLQWLDPFRYRR-RAIPTPRPAPRL 444
>UniRef50_Q3WI81 Cluster: G-protein beta WD-40 repeat precursor; n=1;
Frankia sp. EAN1pec|Rep: G-protein beta WD-40 repeat
precursor - Frankia sp. EAN1pec
Length = 1288
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 558 LVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALW 719
+VG+G L++W A L + P WSP G +A H GV LW
Sbjct: 1012 IVGVGANGVLRLWDRAGKTELAVLA-PADHPAAVEWSPAGDRVAAVHAGGVLLW 1064
>UniRef50_Q8IM34 Cluster: RNA binding protein, putative; n=4;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 107
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 237 EKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 413
E I ++F +FG+I N + G GY FLEY N +A A+ + L Q
Sbjct: 33 EARDDYIKEVFERFGQIKNLHLNIDRRTGFLKGYAFLEYENFVDAKRAIDEMDGTMLLNQ 92
>UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 914
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 407
+ KIF GK+ + Y P G+ F+EY + A EA+ N+ ++D
Sbjct: 22 VRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKEAINILNHSRID 73
>UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1336 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 210
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEA 377
+ + F ++G+IV+ P G GY F+E+ NP++A +A
Sbjct: 22 LRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>UniRef50_Q5CYN8 Cluster: Nop15p/nopp34; nucleolar protein with 1
RRM domain; n=2; Cryptosporidium|Rep: Nop15p/nopp34;
nucleolar protein with 1 RRM domain - Cryptosporidium
parvum Iowa II
Length = 156
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 INKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
+ + FS+FGKI+ + + +NG + GY F+E+ + + A A NN
Sbjct: 32 LKEYFSQFGKILRIKLSRSKKNGHSRGYAFIEFESMEVAQIAASTMNN 79
>UniRef50_O15798 Cluster: CG3; n=7; Plasmodium|Rep: CG3 - Plasmodium
falciparum
Length = 328
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 210 CPQVGPERLEKLQSVINKIFSKFGKIVNEYY 302
CP + P+ LEK VI KI K+G I+ +
Sbjct: 159 CPDICPQELEKQTIVIEKIHKKYGDIITPIF 189
>UniRef50_A7AR42 Cluster: RNA binding motif containing protein; n=1;
Babesia bovis|Rep: RNA binding motif containing protein
- Babesia bovis
Length = 278
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 267 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 392
F FG IV+ G GY F+ Y NP +A A+K N
Sbjct: 186 FQSFGTIVSARVQLDTVGRNRGYGFVSYDNPTSALTAIKNMN 227
>UniRef50_A0D0L0 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
undetermined scaffold_33, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 430
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 246 QSVINKIFSKFGKIVN--EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 419
Q V+++IFS +GK+ N + N L + F+ Y++ +A++A + + +D +
Sbjct: 72 QDVLHEIFSTYGKLTNVEMQFDEQNNMLPLLFAFITYNDEGDASQATQYMHRAIIDGKKI 131
Query: 420 FLVNLFTDFQKY 455
+L D QK+
Sbjct: 132 KCQSLGLDRQKH 143
>UniRef50_Q9P6P7 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 422
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 219 VGPERLEKLQSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 395
VG E + + IF + G + + + E+G GY F EY +P AA AV+ NN
Sbjct: 9 VGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNLNN 68
>UniRef50_Q4P8D6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 301
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +3
Query: 210 CPQVGPERLEKLQSVINKIFSKFG-KIVNEYY 302
CP + PE L+K+ V+++I +K+G K++N +
Sbjct: 146 CPDICPEELDKMGEVVDRIDAKYGKKLINPVF 177
>UniRef50_O42847 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 121
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 168 KESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFL 344
K +GY +++V G V PE E+ + +F+ FG + N + G GY +
Sbjct: 5 KSVEGY--IIIVTG---VHPEATEEQ---VEDLFADFGPVKNLHLNLDRRTGYVKGYALI 56
Query: 345 EYSNPQNAAEAVKATNNCKLDKQ 413
EY+ + A +AV N LD++
Sbjct: 57 EYATLEQAQKAVDEKNLSLLDEK 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,089,442
Number of Sequences: 1657284
Number of extensions: 17111652
Number of successful extensions: 50248
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 48085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50160
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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