Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3h03
(604 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:... 140 3e-32
UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF... 127 2e-28
UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila pseudoobscu... 118 1e-25
UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopteryg... 117 2e-25
UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep... 115 1e-24
UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus fa... 114 1e-24
UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep: Re... 114 2e-24
UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep: ... 113 2e-24
UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L - ... 112 7e-24
UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome s... 111 9e-24
UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep: Re... 111 1e-23
UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo ... 110 2e-23
UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep: Re... 110 2e-23
UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep: R... 110 3e-23
UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2... 102 6e-21
UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whol... 101 2e-20
UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon ... 99 9e-20
UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep: Re... 97 3e-19
UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulo... 96 5e-19
UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep: ... 94 3e-18
UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep: R... 84 3e-15
UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella ve... 83 6e-15
UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep: Reticu... 83 6e-15
UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep: Reticul... 83 6e-15
UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xeno... 74 3e-12
UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 prote... 66 8e-10
UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella ve... 64 2e-09
UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep: Ret... 63 6e-09
UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep: ... 61 2e-08
UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep: R... 60 4e-08
UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma j... 46 7e-04
UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophi... 43 0.006
UniRef50_UPI0000E822BE Cluster: PREDICTED: similar to RTN3w; n=1... 39 0.10
UniRef50_Q5DDK2 Cluster: SJCHGC06495 protein; n=1; Schistosoma j... 38 0.24
UniRef50_Q84LE0 Cluster: Phytocyanin protein, PUP2; n=3; Arabido... 34 2.3
UniRef50_UPI0001555715 Cluster: PREDICTED: similar to immunoglob... 33 3.9
UniRef50_UPI0000DD8631 Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_Q1E1R6 Cluster: Predicted protein; n=1; Coccidioides im... 33 5.2
UniRef50_UPI0000DD824F Cluster: PREDICTED: hypothetical protein;... 32 9.1
UniRef50_A1G4B7 Cluster: TAF4A RNA polymerase II, TATA box bindi... 32 9.1
>UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:
Reticulon/nogo - Aedes aegypti (Yellowfever mosquito)
Length = 493
Score = 140 bits (338), Expect = 3e-32
Identities = 71/158 (44%), Positives = 90/158 (56%)
Frame = +3
Query: 129 AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308
AWF P++LHP VESLIYWR+
Sbjct: 291 AWFKPEKLHPVVESLIYWRDVKKSGAVFGAGLTILIAMSLFSLISVFSYVSLLALFGTVS 350
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YKNVLQAVQKT++GHPFK L+ ++++S ELRRLFLVE
Sbjct: 351 FRIYKNVLQAVQKTSEGHPFKEYLDTDLTLSQEKVQQLSTVAVAHVNALLTELRRLFLVE 410
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDS+KFGV+L+CLTYVGA FNG+T +I+ ++ALFTL
Sbjct: 411 DLVDSIKFGVVLYCLTYVGAIFNGMTCVIIAFVALFTL 448
>UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF,
isoform F; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33113-PF, isoform F - Tribolium castaneum
Length = 479
Score = 127 bits (306), Expect = 2e-28
Identities = 68/147 (46%), Positives = 80/147 (54%)
Frame = +3
Query: 162 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 341
VESLIYWR+ FR+YKN++QAV
Sbjct: 288 VESLIYWRDPKKSGPVFGGVLLVLLALTYFSLISVVAYLSLLGLTGTISFRIYKNIVQAV 347
Query: 342 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVEDLVDSLKFGVL 521
QKT DGHPFK LLE +VS+ ELRRLFLVEDLVDS+KFGVL
Sbjct: 348 QKTGDGHPFKDLLEFDVSLPQEKVKEVSEVAVAHINAAVVELRRLFLVEDLVDSIKFGVL 407
Query: 522 LWCLTYVGACFNGITLIILGWIALFTL 602
LW LTY+GA FNG+TLII+ W+ALF+L
Sbjct: 408 LWTLTYLGAWFNGMTLIIIAWVALFSL 434
>UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila
pseudoobscura|Rep: GA17292-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 547
Score = 118 bits (283), Expect = 1e-25
Identities = 62/147 (42%), Positives = 79/147 (53%)
Frame = +3
Query: 162 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 341
VESLIYWR+ FR+YK+V QAV
Sbjct: 351 VESLIYWRDVKKSGIVFGAGLITLVAISSFSVISVFAYLSLLALFGTVAFRIYKSVTQAV 410
Query: 342 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVEDLVDSLKFGVL 521
QKT+DGHPFK LE ++++S ELRRLFLVEDL+DS+KFGV+
Sbjct: 411 QKTSDGHPFKEYLELDLTLSQEKVQNIAGVAVAHINGFTAELRRLFLVEDLIDSIKFGVI 470
Query: 522 LWCLTYVGACFNGITLIILGWIALFTL 602
LW TY+GA FNG+TL+IL +++LFTL
Sbjct: 471 LWVFTYIGAWFNGMTLVILAFVSLFTL 497
>UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11;
Endopterygota|Rep: CG33113-PF, isoform F - Drosophila
melanogaster (Fruit fly)
Length = 595
Score = 117 bits (282), Expect = 2e-25
Identities = 62/147 (42%), Positives = 79/147 (53%)
Frame = +3
Query: 162 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 341
VESLIYWR+ FR+YK+V QAV
Sbjct: 399 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 458
Query: 342 QKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVEDLVDSLKFGVL 521
QKTN+GHPFK LE ++++S ELRRLFLVED++DS+KFGV+
Sbjct: 459 QKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI 518
Query: 522 LWCLTYVGACFNGITLIILGWIALFTL 602
LW TYVGA FNG+TL+IL +++LFTL
Sbjct: 519 LWVFTYVGAWFNGMTLVILAFVSLFTL 545
>UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep:
Reticulon 1-A1 - Fugu rubripes (Japanese pufferfish)
(Takifugu rubripes)
Length = 729
Score = 115 bits (276), Expect = 1e-24
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+VLQAVQKT++GHPFK LE E+++S ELRRLFLV+
Sbjct: 591 FRIYKSVLQAVQKTDEGHPFKSYLEMEITLSQDQISKYADKILLYSNTCVKELRRLFLVQ 650
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W LTYVGA FNG+TL+IL +++FT+
Sbjct: 651 DLVDSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTM 688
>UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus
familiaris|Rep: reticulon 1 - Canis familiaris
Length = 689
Score = 114 bits (275), Expect = 1e-24
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+VLQAVQKT++GHPFK LE E+++S ELRRLFLV+
Sbjct: 551 FRIYKSVLQAVQKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQ 610
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W LTYVGA FNG+TL+++ +++FTL
Sbjct: 611 DLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTL 648
>UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep:
Reticulon-1 - Homo sapiens (Human)
Length = 776
Score = 114 bits (274), Expect = 2e-24
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+VLQAVQKT++GHPFK LE E+++S ELRRLFLV+
Sbjct: 638 FRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQ 697
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W LTYVGA FNG+TL+++ +++FTL
Sbjct: 698 DLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTL 735
>UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep:
Reticulon 5-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 818
Score = 113 bits (273), Expect = 2e-24
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+VLQAVQKT++GHPFK LE E+S+S ELRRLFLV+
Sbjct: 681 FRVYKSVLQAVQKTDEGHPFKSYLEVEISLSADQISKYVDKTQLYINTTMKELRRLFLVQ 740
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDS+KF VL+W LTYVGA FNG+TL+IL I++F++
Sbjct: 741 DLVDSIKFAVLMWLLTYVGALFNGLTLLILAVISMFSV 778
>UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L -
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Length = 383
Score = 112 bits (269), Expect = 7e-24
Identities = 60/159 (37%), Positives = 78/159 (49%)
Frame = +3
Query: 123 PHAWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
P P P+V L+YWR+
Sbjct: 182 PSTPLQPLMQFPKVVELLYWRDVKTSGVVFGASLSLLLSLTLCSIVSVSSYIGLALLSVT 241
Query: 303 XXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFL 482
FR+YK +LQA+QK+++GHPFK L+ +V++S ELRRLFL
Sbjct: 242 ICFRIYKGILQAIQKSDEGHPFKLYLDQDVALSEGTVHKYSDCVLARFNTTVTELRRLFL 301
Query: 483 VEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
VEDLVDSLKF VL+W LTYVGA FNG+TL ILG + +F+
Sbjct: 302 VEDLVDSLKFAVLMWILTYVGALFNGLTLFILGLVGMFS 340
>UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 991
Score = 111 bits (268), Expect = 9e-24
Identities = 53/97 (54%), Positives = 68/97 (70%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK +LQA+QK+++GHPF+ LE EV++S E+RRLFLVE
Sbjct: 853 FRIYKGILQAIQKSDEGHPFRQYLEEEVALSEEVVHKYSDLVLAKLNRSVAEVRRLFLVE 912
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
DLVDSLKF L+W LTYVGA FNG+TL+ILG IA+F+
Sbjct: 913 DLVDSLKFAALMWILTYVGALFNGLTLLILGLIAVFS 949
>UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep:
Reticulon 4-l - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 322
Score = 111 bits (267), Expect = 1e-23
Identities = 54/97 (55%), Positives = 65/97 (67%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK +LQAVQK+ DGHPFK L+ + ++ ELRRLFLVE
Sbjct: 184 FRIYKGILQAVQKSEDGHPFKMYLDKDTALPAEMVHKYSDSTLVHINTVIKELRRLFLVE 243
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
DLVDSLKF VL+W LTYVGA FNG+TLIILG+I F+
Sbjct: 244 DLVDSLKFAVLMWILTYVGALFNGLTLIILGFIGAFS 280
>UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo
sapiens (Human)
Length = 373
Score = 110 bits (265), Expect = 2e-23
Identities = 52/98 (53%), Positives = 69/98 (70%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK V+QA+QK+++GHPF+ LE+EV++S ELRRLFLV+
Sbjct: 235 FRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVD 294
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W TYVGA FNG+TL+IL I+LF++
Sbjct: 295 DLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSV 332
>UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep:
Reticulon-4 - Homo sapiens (Human)
Length = 1192
Score = 110 bits (265), Expect = 2e-23
Identities = 52/98 (53%), Positives = 69/98 (70%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK V+QA+QK+++GHPF+ LE+EV++S ELRRLFLV+
Sbjct: 1054 FRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVD 1113
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W TYVGA FNG+TL+IL I+LF++
Sbjct: 1114 DLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSV 1151
>UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep:
Reticulon 1-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 767
Score = 110 bits (264), Expect = 3e-23
Identities = 53/98 (54%), Positives = 69/98 (70%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+VLQAVQKT++GHPFK L+ E+S+S ELRRLFLV+
Sbjct: 629 FRVYKSVLQAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQ 688
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLKF VL+W LTYVGA FNG+TL+I+ + +F++
Sbjct: 689 DLVDSLKFAVLMWLLTYVGALFNGLTLLIMVVVCMFSM 726
>UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2 -
Xenopus laevis (African clawed frog)
Length = 1055
Score = 102 bits (245), Expect = 6e-21
Identities = 47/97 (48%), Positives = 65/97 (67%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
R+YK +LQA+QK+ +GHPF+ +LE+ ++V ELR LFLVED
Sbjct: 918 RIYKGILQAIQKSEEGHPFRSILESNLAVPEDLVQKYCNVALNHVNCTVKELRHLFLVED 977
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
LVDSLKF VL+W TY+GA FNG+TL+I+ I+LF++
Sbjct: 978 LVDSLKFAVLMWVFTYIGALFNGLTLLIVALISLFSI 1014
>UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10698,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 214
Score = 101 bits (241), Expect = 2e-20
Identities = 48/97 (49%), Positives = 64/97 (65%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+V+QAVQK++DGHPF+ LL+ ++SVS + RRL LVE
Sbjct: 74 FRVYKSVIQAVQKSDDGHPFRSLLDRDISVSSEWIRALADQSLVYVNWFVSQTRRLILVE 133
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
DLVDSLK ++W +TYVGA FNG+TL+I+ I FT
Sbjct: 134 DLVDSLKVATVMWVMTYVGAIFNGVTLLIIADIIFFT 170
>UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon 4
isoform B2; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to reticulon 4 isoform B2 -
Strongylocentrotus purpuratus
Length = 943
Score = 98.7 bits (235), Expect = 9e-20
Identities = 51/98 (52%), Positives = 63/98 (64%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK VL AVQK+++G PFK LE +V++S LR L LVE
Sbjct: 805 FRVYKTVLAAVQKSDEGSPFKPYLEIDVTLSEDQIESYSKKAVQKINVCITSLRHLLLVE 864
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDS+KF V LW LTYVGA FNG+TLIIL +I LF++
Sbjct: 865 DLVDSIKFAVGLWLLTYVGAWFNGLTLIILAYIGLFSM 902
>UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep:
Reticulon-3 - Homo sapiens (Human)
Length = 1032
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/98 (46%), Positives = 64/98 (65%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+V+QAVQK+ +GHPFK L+ ++++S + RLFLVE
Sbjct: 893 FRIYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVE 952
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLK V +W +TYVGA FNGITL+IL + +F++
Sbjct: 953 DLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLIFSV 990
>UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulon-3 -
Mus musculus (Mouse)
Length = 964
Score = 96.3 bits (229), Expect = 5e-19
Identities = 46/98 (46%), Positives = 64/98 (65%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR+YK+V+QAVQK+ +GHPFK L+ ++++S + RLFLVE
Sbjct: 825 FRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVE 884
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
DLVDSLK V +W +TYVGA FNGITL+IL + +F++
Sbjct: 885 DLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSV 922
>UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep:
Reticulon 6-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 875
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/96 (50%), Positives = 60/96 (62%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
R++ VLQA++KT DGHPF+ LE +V +S ELRRLFLVED
Sbjct: 738 RVFTAVLQAMRKTEDGHPFRQYLERDVLLSADAVHTHSEALLRRINTALVELRRLFLVED 797
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
LVDSLK V LW LTYVG+ FNG+TL+I+ I F+
Sbjct: 798 LVDSLKLAVGLWLLTYVGSWFNGLTLLIIALIGAFS 833
>UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep:
RTN-B2 - Ciona intestinalis (Transparent sea squirt)
Length = 377
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/98 (44%), Positives = 57/98 (58%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FRLYK VLQ + T +PF+ LL+ EV++S R L LV+
Sbjct: 239 FRLYKLVLQTLNGTQQPNPFQSLLDMEVTLSKDQIHKYADVILDHLNCTLVCTRDLVLVK 298
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++V SLKF V +W LTY+G CFNG+TL+ILG IA F L
Sbjct: 299 NMVASLKFAVFMWLLTYIGCCFNGLTLLILGVIAAFVL 336
>UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
+R+ V+ A+QK+ +PFK LL+ E+ + LRRLFLVE
Sbjct: 52 YRVGMTVMGAIQKSGTENPFKTLLDKEIEIPKEKAVEMAESLAEHINCLTKSLRRLFLVE 111
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
D+VDS+KFGV+LW L+YVGA F+ +TLII + +F+L
Sbjct: 112 DIVDSIKFGVMLWVLSYVGAWFSMLTLIIFAVVMVFSL 149
>UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep:
Reticulon-2 - Mus musculus (Mouse)
Length = 471
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/97 (42%), Positives = 61/97 (62%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
R+Y+ VLQAV + + +PF+ L+ +++++ +LR FLVED
Sbjct: 322 RVYRKVLQAVHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVED 381
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
LVDSLK +L + LT+VGA FNG+TL+ILG +ALFT+
Sbjct: 382 LVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTV 418
>UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep:
Reticulon-2 - Homo sapiens (Human)
Length = 545
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/97 (42%), Positives = 60/97 (61%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
R+Y+ VLQAV + + +PF+ L+ +++++ +LR FLVED
Sbjct: 395 RVYRKVLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVED 454
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
LVDSLK +L + LT+VGA FNG+TL+ILG I LFT+
Sbjct: 455 LVDSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTI 491
>UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xenopus
laevis (African clawed frog)
Length = 321
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/96 (39%), Positives = 57/96 (59%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
RLY +L A+++ N +PF++ L+ ++ ++ LR LFLVE+
Sbjct: 184 RLYTKLLHALKRGNGANPFQYYLDTDLKLTTKQAEEIVARAFSLASTTLCTLRSLFLVEE 243
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
L DSLKF V+++ LTYVGA FNGIT+++L I FT
Sbjct: 244 LKDSLKFLVIVYLLTYVGAVFNGITVLLLCVIGAFT 279
>UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to RTN2 protein, partial - Ornithorhynchus
anatinus
Length = 188
Score = 65.7 bits (153), Expect = 8e-10
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 465 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFT 599
LR LFLVED+VDSLK +L + LT+VGA FNG+TL+ILG I++FT
Sbjct: 107 LRHLFLVEDIVDSLKLALLFYILTFVGAVFNGLTLLILGVISVFT 151
>UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/97 (37%), Positives = 49/97 (50%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
RL A KT HP L +++VS +RRLFLVED
Sbjct: 54 RLLFTARSAFMKTEFQHPLNSYLSKDINVSKDRADLIGERAAGYIVDSTVSVRRLFLVED 113
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
L DS+K V+L+ L+Y+ F+GITL +G+I LFT+
Sbjct: 114 LADSIKLLVVLYILSYLAQWFSGITLTFIGFIGLFTV 150
>UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep:
Reticulon - Caenorhabditis remanei
Length = 222
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/98 (29%), Positives = 53/98 (54%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR YK + ++KT+ +PF +L ++++ +L++L VE
Sbjct: 76 FRAYKKIEAQIKKTDTENPFNEILAKDLALPQEKVHAQADVITEHATCVANKLKKLIFVE 135
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++S+KFG++LW LTYV + F+G TL +L + F++
Sbjct: 136 SPLESIKFGLILWSLTYVASWFSGCTLAVLALLGTFSI 173
>UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep:
Reticulon 8-c - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 208
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 315 LYKNVLQAVQKTNDG-HPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
LYK + V + NDG HPF+ L+ + +++ EL+RLF ++
Sbjct: 57 LYKAM--TVTRLNDGSHPFQSYLDEDHTLTDEDTVRMAEQMVLLIATAVSELKRLFFIDS 114
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++DS+KF V L+ LTYVG NG+TL++ G I F+L
Sbjct: 115 IMDSVKFIVFLYLLTYVGVQANGLTLVMSGVICAFSL 151
>UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep:
Reticulon 2c - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 203
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 53/97 (54%)
Frame = +3
Query: 312 RLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVED 491
R+Y +L +Q + HPF+ L+ ++S+S LR L V +
Sbjct: 55 RIYYKLLHVLQLGDGVHPFQSYLDLDISLSGEEAEHCLQRAIVLSCSALETLRNLIFVGN 114
Query: 492 LVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
L SLKF +L++ +T++G NG+TLII+G IA+F++
Sbjct: 115 LFSSLKFWLLMYVVTFLGNLCNGLTLIIIGVIAVFSV 151
>UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02814 protein - Schistosoma
japonicum (Blood fluke)
Length = 214
Score = 46.0 bits (104), Expect = 7e-04
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 468 RRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALF 596
R +FL+ D S+KF VLL+ LTY+GA FN +TL IL +F
Sbjct: 121 REIFLLTDPAASIKFAVLLYLLTYIGAQFNFLTLCILFTFGIF 163
>UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophila
melanogaster|Rep: Tropomyosin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 158
Score = 42.7 bits (96), Expect = 0.006
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 474 LFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILG 581
L LVE DSLKF VLL + +G CFNG+TL+I G
Sbjct: 112 LLLVEKWEDSLKFLVLLCGINLLGDCFNGLTLLIFG 147
>UniRef50_UPI0000E822BE Cluster: PREDICTED: similar to RTN3w; n=1;
Gallus gallus|Rep: PREDICTED: similar to RTN3w - Gallus
gallus
Length = 115
Score = 38.7 bits (86), Expect = 0.10
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFK 371
FR+YK+V+QAVQK+ +GHPF+
Sbjct: 95 FRVYKSVIQAVQKSEEGHPFR 115
>UniRef50_Q5DDK2 Cluster: SJCHGC06495 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06495 protein - Schistosoma
japonicum (Blood fluke)
Length = 165
Score = 37.5 bits (83), Expect = 0.24
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 312 RLYKNVL---QAVQKTNDG--HPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRL 476
+LY VL +A Q+T++ H F LE ++ S +LRR+
Sbjct: 22 KLYNVVLGSNKAEQETSNSSKHSFHSWLEYDILFSEDKIAQRAAAASEHLSEKLNQLRRI 81
Query: 477 FLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWI 587
L+ D ++ K + L+ L+ VG+ FN +TLI + ++
Sbjct: 82 LLMHDYFETAKLAICLYLLSIVGSWFNLLTLITVVFV 118
>UniRef50_Q84LE0 Cluster: Phytocyanin protein, PUP2; n=3;
Arabidopsis thaliana|Rep: Phytocyanin protein, PUP2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 370
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 31 P*QTPLVSHSHALRKVSA-CPSQHPRYAPSSTPMPGSTHSDCTPK 162
P TP S +HA A PS P +APS +P +HS TPK
Sbjct: 233 PAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSXSHSPATPK 277
>UniRef50_UPI0001555715 Cluster: PREDICTED: similar to
immunoglobulin superfamily, member 2, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
immunoglobulin superfamily, member 2, partial -
Ornithorhynchus anatinus
Length = 770
Score = 33.5 bits (73), Expect = 3.9
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +1
Query: 4 YRRESRARRP*QTPLVSHSHALRKVSACPSQHP--RYAPSST----PMPGSTHS 147
+R+E R R +P VS +H + CPS HP +APS T PMPG T++
Sbjct: 642 FRKELRRAR---SPGVS-AHLAQPAGQCPSSHPLGTFAPSGTHHLSPMPGKTYN 691
>UniRef50_UPI0000DD8631 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 160
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 43 PLVSHSHALRKVSACPSQHPRYAPSSTPM-PGSTHSDCTPKWSR 171
P++S A S CP QHPR P+S P+ P H P SR
Sbjct: 45 PVLSGGQAGGPHSDCPPQHPRLTPTSPPLGPSPQHMHKPPGPSR 88
>UniRef50_Q1E1R6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 1139
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 43 PLVSHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPK 162
PLV H H K+S CPSQ R+ P S P ++ S TP+
Sbjct: 320 PLV-HMHEPNKLSQCPSQSSRHEPDSGD-PAASCSPATPQ 357
>UniRef50_UPI0000DD824F Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 264
Score = 32.3 bits (70), Expect = 9.1
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2
Query: 192 PRSASRSTTPLRGAVAVGRTRHGGRGWCIAR 100
PRSA R + R AV GR R GG GW AR
Sbjct: 219 PRSAPRPSAARRLAVQAGRGRVGGGGWPRAR 249
>UniRef50_A1G4B7 Cluster: TAF4A RNA polymerase II, TATA box binding
protein (TBP)-associated factor; n=1; Salinispora
arenicola CNS205|Rep: TAF4A RNA polymerase II, TATA box
binding protein (TBP)-associated factor - Salinispora
arenicola CNS205
Length = 208
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 82 ACPSQHPRYAPSSTPMPGSTHSDCTPKW 165
A P+ HP AP + P PG T TP W
Sbjct: 35 AVPTPHPGVAPPAPPGPGGTPPTSTPGW 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,862,127
Number of Sequences: 1657284
Number of extensions: 6043572
Number of successful extensions: 31064
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 28856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30956
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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