Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3h03
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 30 1.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 30 1.5
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 30 1.5
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 30 1.5
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 30 1.5
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 30 1.5
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 30 1.5
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 30 1.5
AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical ... 29 2.6
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 28 5.9
U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family pr... 27 7.8
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 27 7.8
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 27 7.8
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 7.8
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 7.8
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 72.1 bits (169), Expect = 3e-13
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Frame = +3
Query: 111 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+IL H AW D + + P V +IYWR+
Sbjct: 356 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 415
Query: 285 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYE 464
FR++K V ++KT+ HPF +L ++++ +
Sbjct: 416 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANK 475
Query: 465 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 476 LKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 521
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 72.1 bits (169), Expect = 3e-13
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Frame = +3
Query: 111 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+IL H AW D + + P V +IYWR+
Sbjct: 2270 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 2329
Query: 285 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYE 464
FR++K V ++KT+ HPF +L ++++ +
Sbjct: 2330 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANK 2389
Query: 465 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 2390 LKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 2435
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/98 (31%), Positives = 56/98 (57%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 58 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 117
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 118 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 155
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/98 (31%), Positives = 56/98 (57%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 76 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 135
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 136 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 173
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/98 (31%), Positives = 56/98 (57%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2520
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 2521 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 2558
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/98 (30%), Positives = 55/98 (56%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
F ++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTL 602
++S+KFG++LW LTY+ + F+G TL ILG + +F++
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSV 2439
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 181 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 220
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1821 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1860
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 188 CPPKVPKSASSNCVFPGSTHDESSP 212
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 292 CPPKVPKSASSNCVFPGSTHDESSP 316
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical
protein Y34B4A.9 protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 102 SLCTILDPHAWFDPQRLHPEVES 170
++ +I DP WFDP+ EVE+
Sbjct: 40 AVLSISDPQPWFDPENFRKEVET 62
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 602 QREQRYPTEDDERDPVEAXPHVREAPQQHAELQR 501
+RE R ED R P+E ++ E+ +QHA +R
Sbjct: 162 RREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family
protein 7 protein.
Length = 327
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 92 VSTLAMHHPRPPCLVRPTATAPRSG 166
V+ + HHP P C V P +PRSG
Sbjct: 125 VAGVGEHHPLPTCFVHP--QSPRSG 147
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 602 QREQRYPTEDDERDPVEAXPHVREAPQQHAELQRVHQVLHQEQ 474
Q++QR+ R+ + RE +QH Q+ Q LHQ+Q
Sbjct: 387 QQQQRHAAAQQLREREQREQRERERERQHQ--QQAQQALHQQQ 427
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 602 QREQRYPTEDDERDPVEAXPHVREAPQQHAELQRVHQVLHQEQ 474
Q++QR+ R+ + RE +QH Q+ Q LHQ+Q
Sbjct: 899 QQQQRHAAAQQLREREQREQRERERERQHQ--QQAQQALHQQQ 939
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 602 QREQRYPTEDDERDPVEAXPHVREAPQQHAELQRVHQVLHQEQ 474
Q++QR+ R+ + RE +QH Q+ Q LHQ+Q
Sbjct: 904 QQQQRHAAAQQLREREQREQRERERERQHQ--QQAQQALHQQQ 944
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 602 QREQRYPTEDDERDPVEAXPHVREAPQQHAELQRVHQVLHQEQ 474
Q++QR+ R+ + RE +QH Q+ Q LHQ+Q
Sbjct: 904 QQQQRHAAAQQLREREQREQRERERERQHQ--QQAQQALHQQQ 944
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,098,420
Number of Sequences: 27780
Number of extensions: 131499
Number of successful extensions: 717
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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