Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3g16
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P56537 Cluster: Eukaryotic translation initiation facto... 405 e-112
UniRef50_Q2UTN7 Cluster: Translation initiation factor 6; n=1; A... 343 4e-93
UniRef50_O62106 Cluster: Eukaryotic translation initiation facto... 314 2e-84
UniRef50_O22290 Cluster: Eukaryotic translation initiation facto... 307 3e-82
UniRef50_UPI0000D55B77 Cluster: PREDICTED: similar to CG17611-PA... 244 2e-63
UniRef50_Q8SS47 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTO... 238 1e-61
UniRef50_A2ET54 Cluster: Translation initiation factor eIF-6, pu... 224 2e-57
UniRef50_A2WNI2 Cluster: Putative uncharacterized protein; n=3; ... 175 8e-43
UniRef50_Q98RM8 Cluster: Translation initiation factor eIF6; n=1... 161 1e-38
UniRef50_Q9YD27 Cluster: Translation initiation factor 6; n=1; A... 140 3e-32
UniRef50_Q9UYI6 Cluster: Translation initiation factor 6; n=4; T... 130 3e-29
UniRef50_Q2NGQ7 Cluster: Translation initiation factor 6; n=1; M... 130 4e-29
UniRef50_Q8PYQ3 Cluster: Translation initiation factor 6; n=3; M... 128 2e-28
UniRef50_Q18EU8 Cluster: Translation initiation factor 6; n=5; H... 126 9e-28
UniRef50_Q702B7 Cluster: Putative translation initiation factor ... 124 3e-27
UniRef50_Q46FA1 Cluster: Translation initiation factor 6; n=3; E... 124 3e-27
UniRef50_Q60357 Cluster: Translation initiation factor 6; n=6; M... 122 1e-26
UniRef50_Q4TAX3 Cluster: Chromosome undetermined SCAF7240, whole... 119 7e-26
UniRef50_UPI00015BAD98 Cluster: translation initiation factor 6 ... 118 1e-25
UniRef50_Q8TUY5 Cluster: Translation initiation factor 6; n=1; M... 118 2e-25
UniRef50_A2BN57 Cluster: Translation initiation factor 6; n=1; H... 117 4e-25
UniRef50_O27648 Cluster: Translation initiation factor 6; n=1; M... 116 5e-25
UniRef50_A6QRE5 Cluster: Integrin beta 4 binding protein; n=4; E... 115 1e-24
UniRef50_O28214 Cluster: Translation initiation factor 6; n=1; A... 110 3e-23
UniRef50_Q2FS97 Cluster: Translation initiation factor 6; n=2; M... 108 1e-22
UniRef50_Q8ZTU1 Cluster: Translation initiation factor 6; n=5; T... 107 3e-22
UniRef50_A1RXF3 Cluster: Putative translation initiation factor ... 101 2e-20
UniRef50_A0RYC3 Cluster: Translation initiation factor; n=2; The... 101 2e-20
UniRef50_Q971I4 Cluster: Translation initiation factor 6; n=4; S... 101 2e-20
UniRef50_Q6L2L0 Cluster: Translation initiation factor 6; n=3; T... 100 8e-20
UniRef50_Q97CU0 Cluster: Translation initiation factor 6; n=1; T... 97 3e-19
UniRef50_A5UL31 Cluster: Translation initiation factor 6; n=1; M... 97 6e-19
UniRef50_A2STI7 Cluster: Putative translation initiation factor ... 97 6e-19
UniRef50_A3DNH5 Cluster: Putative translation initiation factor ... 96 1e-18
UniRef50_Q9P9D7 Cluster: Translation initiatin factor 6; n=1; un... 91 3e-17
UniRef50_A2ZIH4 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_Q29281 Cluster: Orf protein; n=1; Sus scrofa|Rep: Orf p... 48 4e-04
UniRef50_Q3LWK6 Cluster: Elongation initiation factor 6; n=1; Bi... 47 5e-04
UniRef50_Q74MW8 Cluster: Translation initiation factor 6; n=1; N... 46 0.001
UniRef50_UPI0000F1DC0B Cluster: PREDICTED: hypothetical protein;... 37 0.51
UniRef50_Q3K821 Cluster: Putative uncharacterized protein; n=1; ... 37 0.51
UniRef50_Q0UXC6 Cluster: Putative uncharacterized protein; n=3; ... 37 0.67
UniRef50_Q18WJ5 Cluster: Hydantoinase/oxoprolinase; n=2; Desulfi... 36 1.2
UniRef50_A6PT32 Cluster: Putative uncharacterized protein precur... 36 1.2
UniRef50_Q01SG3 Cluster: Outer membrane efflux protein precursor... 36 1.6
UniRef50_Q8MKI9 Cluster: Brca2 protein; n=8; Eukaryota|Rep: Brca... 34 3.6
UniRef50_Q0G549 Cluster: Lipopolysaccharide biosynthesis; n=1; F... 34 4.8
UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Re... 34 4.8
UniRef50_A7TSX1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A0RV31 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_Q9V4E6 Cluster: CG1901-PA, isoform A; n=4; Sophophora|R... 33 6.3
UniRef50_Q24HL4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_Q864S8 Cluster: Breast cancer type 2 susceptibility pro... 33 6.3
UniRef50_Q6A724 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
>UniRef50_P56537 Cluster: Eukaryotic translation initiation factor 6
(eIF-6) (B4 integrin interactor) (CAB) (p27(BBP))
(B(2)GCN homolog); n=62; Eukaryota|Rep: Eukaryotic
translation initiation factor 6 (eIF-6) (B4 integrin
interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) - Homo
sapiens (Human)
Length = 245
Score = 405 bits (998), Expect = e-112
Identities = 186/236 (78%), Positives = 216/236 (91%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MAVR FENN E+G F+KLTNTYCLVAIGGSENFYSVFE EL++TIPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
RM VGN++GLLVP++TTD ELQHIRNSLP+ V+++RVEERLSALGNV CNDYVALVHPD
Sbjct: 61 RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
LD++TEEILAD L VEVFRQT+A VLVGSY SN+GGLVHPKT+I+DQDELSSLLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLNDAKPTAITSTM 797
LVAGTVNRGS+V+AAGMVVNDWCAFCGLDTTSTE+SV+ESVF+LN+A+P+ I ++M
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSM 236
>UniRef50_Q2UTN7 Cluster: Translation initiation factor 6; n=1;
Aspergillus oryzae|Rep: Translation initiation factor 6
- Aspergillus oryzae
Length = 272
Score = 343 bits (842), Expect = 4e-93
Identities = 168/257 (65%), Positives = 205/257 (79%), Gaps = 25/257 (9%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MAVR QFEN+NEVGVF++LTN+Y +VAIG SENFYSVFEAEL + IP+ HA++ G RI+G
Sbjct: 1 MAVRAQFENSNEVGVFARLTNSYAVVAIGASENFYSVFEAELQDVIPICHATIAGTRIVG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
R+T GN+ GLLVP++TTD ELQH+RN+LP++VK+QR+EERLSALGNVI CND+VAL+HPD
Sbjct: 61 RLTAGNRKGLLVPTTTTDQELQHLRNTLPDSVKIQRIEERLSALGNVICCNDHVALIHPD 120
Query: 450 LDKDTEEI-------------------------LADTLNVEVFRQTIAGNVLVGSYTALS 554
L+++TEE+ +AD L VEVFRQTIA NVL GSY ALS
Sbjct: 121 LERETEEMYYPHHHHCFLITIWHGMKVLTIFTSIADVLGVEVFRQTIADNVLTGSYMALS 180
Query: 555 NRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEI 734
N+GG+VHPKT+I+DQDELSSLLQVPLVAG+VNRGS VV AGMVVNDW A GLDTT+TE+
Sbjct: 181 NQGGIVHPKTSIRDQDELSSLLQVPLVAGSVNRGSAVVGAGMVVNDWLAVTGLDTTATEL 240
Query: 735 SVIESVFQLNDAKPTAI 785
SVIESVF+L + P +
Sbjct: 241 SVIESVFRLGEMGPRGV 257
>UniRef50_O62106 Cluster: Eukaryotic translation initiation factor
6; n=38; Eukaryota|Rep: Eukaryotic translation
initiation factor 6 - Caenorhabditis elegans
Length = 246
Score = 314 bits (771), Expect = 2e-84
Identities = 141/237 (59%), Positives = 195/237 (82%), Gaps = 1/237 (0%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MA+RV +E +N+VGVF LTN+YCLV +GG++NFYS+ EAEL++ IPV+H S+ RI+G
Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
R+TVGN++GLLVP++TTD ELQH+RNSLP+ V ++RV+ERLSALGNVIACND+VA+VH +
Sbjct: 61 RLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAE 120
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
+ +TE+ L + L VEVFR ++A N LVGSY LS+ G LV +T + Q E+++LLQ+P
Sbjct: 121 ISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIP 180
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLND-AKPTAITSTM 797
+VAGT NRGS+++ AGMVVNDW AFCGLD+TSTE+SV+ES+F+L + PT+I++ +
Sbjct: 181 VVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQL 237
>UniRef50_O22290 Cluster: Eukaryotic translation initiation factor
6; n=20; Eukaryota|Rep: Eukaryotic translation
initiation factor 6 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 247
Score = 307 bits (753), Expect = 3e-82
Identities = 142/238 (59%), Positives = 187/238 (78%), Gaps = 2/238 (0%)
Frame = +3
Query: 90 MAVRVQFENNN-EVGVFSKLTNTYCLV-AIGGSENFYSVFEAELAETIPVIHASVGGCRI 263
MA R+Q++NNN E+GVFSKLTN YCLV A S NF++ +E++L IP++ S+GG
Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60
Query: 264 IGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVH 443
IG + VGNKNGLL+ + TD ELQH+R+SLP+ V +QR+EE + ALGN IACNDYVALVH
Sbjct: 61 IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120
Query: 444 PDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQ 623
P L+KDTEEI++D L VEV+RQTIA N LVGSY +LSN GG+VH TN+++ EL++L+Q
Sbjct: 121 PKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQ 180
Query: 624 VPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLNDAKPTAITSTM 797
VPLVAGTVNRGS V++AG+ VNDW AFCG DTT+ E+SV+ ++F+L ++P + S M
Sbjct: 181 VPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEM 238
>UniRef50_UPI0000D55B77 Cluster: PREDICTED: similar to CG17611-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG17611-PA - Tribolium castaneum
Length = 290
Score = 244 bits (598), Expect = 2e-63
Identities = 116/227 (51%), Positives = 166/227 (73%), Gaps = 4/227 (1%)
Frame = +3
Query: 93 AVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYS----VFEAELAETIPVIHASVGGCR 260
A R+Q+ N+NE+G F +LTN+YCL+ GG Y + +++L E IP I+ S+ GC+
Sbjct: 64 AFRIQYGNSNEIGAFIRLTNSYCLM--GGEPQQYEKIQRIIQSDLGE-IPAINTSLAGCK 120
Query: 261 IIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALV 440
++GR+ VGNKNGLLVP T DTELQ ++ LPE++K+ ++E++LSALGNVI CND VAL+
Sbjct: 121 VVGRLCVGNKNGLLVPELTYDTELQRLKEELPESLKISKIEDKLSALGNVIVCNDSVALI 180
Query: 441 HPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLL 620
HPDLD++TEE++ADTL VEVFR I+ N LVGS+ L+N GGLV+ + + LSSLL
Sbjct: 181 HPDLDRETEEVIADTLQVEVFRHMISNNPLVGSHCTLNNLGGLVNSDIGQNELENLSSLL 240
Query: 621 QVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
Q+ LV GTVN+G+ ++ +G+V +D A+ G+ TT+ E + IE+ F L
Sbjct: 241 QLSLVPGTVNQGNKLIGSGVVCSDSFAYAGMKTTAREFTDIENAFLL 287
>UniRef50_Q8SS47 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTOR
6; n=1; Encephalitozoon cuniculi|Rep: EUKARYOTIC
TRANSLATION INITIATION FACTOR 6 - Encephalitozoon
cuniculi
Length = 248
Score = 238 bits (582), Expect = 1e-61
Identities = 108/224 (48%), Positives = 156/224 (69%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M+ R+ FE ++E+G + LTNTYC++ S N + +A IP++ ++ R +G
Sbjct: 8 MSYRIDFEGSSEIGAYMSLTNTYCVIGRSQSNNVLKFLQENVA--IPIVETTINSIRSVG 65
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
GN++GLLVP + TD E+ HIRNSLPE+V ++R+EERL+ALGNVI CND++A++H D
Sbjct: 66 SQCRGNRHGLLVPHTITDQEIMHIRNSLPEDVVVRRIEERLNALGNVILCNDHIAIIHGD 125
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
LDK++E+++ D L V V+RQ I LVG++ AL+N+G LVHP T+ + Q ELS LL+V
Sbjct: 126 LDKESEDLIRDVLQVHVYRQNIGQEPLVGTFGALNNQGMLVHPFTSTECQKELSELLEVN 185
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
+VAGT+N GS V G+V NDW G+ TT+ E++VIE VF L
Sbjct: 186 VVAGTINGGSQCVGGGVVANDWMCIAGIKTTNVEMAVIEGVFDL 229
>UniRef50_A2ET54 Cluster: Translation initiation factor eIF-6,
putative family protein; n=1; Trichomonas vaginalis
G3|Rep: Translation initiation factor eIF-6, putative
family protein - Trichomonas vaginalis G3
Length = 284
Score = 224 bits (548), Expect = 2e-57
Identities = 103/227 (45%), Positives = 162/227 (71%), Gaps = 1/227 (0%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELA-ETIPVIHASVGGCRII 266
M R ++++++EVG ++ LT+TYCL+ ++++ F+ ++ +++ G I+
Sbjct: 1 MVSRCKYQSSSEVGAYATLTDTYCLLPTTTTKSWTETFDVLTDFNNTTLVMSNIAGTPIV 60
Query: 267 GRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHP 446
GR+TVGNKNGLLVP +TTD+EL I SLP+ V ++R+EE+ SALGNVI+CND++AL+HP
Sbjct: 61 GRLTVGNKNGLLVPLTTTDSELAQIEQSLPDGVVVERIEEKFSALGNVISCNDHIALIHP 120
Query: 447 DLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQV 626
+LD++T EI+ D L V+VF IA LVGSY+ +NRGG+V PK +++ +ELS L +
Sbjct: 121 ELDQETVEIIKDVLQVDVFPTLIANESLVGSYSVFTNRGGIVTPKATVEEIEELSGQLGI 180
Query: 627 PLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLND 767
+ A TVNRGS +V AG++VN+ FCG +TT+ EI+ + +F+++D
Sbjct: 181 NIEAATVNRGSGLVNAGILVNNSRLFCGWETTALEIANLTRIFKIDD 227
>UniRef50_A2WNI2 Cluster: Putative uncharacterized protein; n=3;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 214
Score = 175 bits (427), Expect = 8e-43
Identities = 78/115 (67%), Positives = 100/115 (86%)
Frame = +3
Query: 453 DKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPL 632
D+ TEEI++D L VEVFRQTIAGN+LVGS+ A SN+GGLVHP+T+++DQ ELS+LL+VPL
Sbjct: 90 DQGTEEIISDVLGVEVFRQTIAGNILVGSFCAFSNKGGLVHPQTSVEDQAELSTLLEVPL 149
Query: 633 VAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLNDAKPTAITSTM 797
AG++NRGS+VVAAGM VNDW AFCG DTT+TE+SV+ESVF+L D +P A+ + M
Sbjct: 150 AAGSINRGSEVVAAGMAVNDWAAFCGADTTATELSVVESVFRLRDGRPGALGADM 204
Score = 141 bits (342), Expect = 2e-32
Identities = 76/192 (39%), Positives = 120/192 (62%), Gaps = 13/192 (6%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MA RV+FEN++E+GVF++LTN YC++ GG+ENF+SVFE+ELA+ +PV+ S+GG RIIG
Sbjct: 1 MASRVRFENSSEIGVFARLTNAYCVLPDGGAENFFSVFESELADVVPVVRTSIGGTRIIG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEE-------RLSALGNVI----- 413
RM VGNKNGLL+P +TTD ELQH++NSLP+ + + + R + GN++
Sbjct: 61 RMCVGNKNGLLLPHTTTDQELQHLKNSLPDQGTEEIISDVLGVEVFRQTIAGNILVGSFC 120
Query: 414 ACNDYVALVHPDLDKDTEEILADTLNVEVFRQTI-AGNVLVGSYTALSNRGGLVHPKTNI 590
A ++ LVHP + + L+ L V + +I G+ +V + A+++ T
Sbjct: 121 AFSNKGGLVHPQTSVEDQAELSTLLEVPLAAGSINRGSEVVAAGMAVNDWAAFCGADTTA 180
Query: 591 QDQDELSSLLQV 626
+ + S+ ++
Sbjct: 181 TELSVVESVFRL 192
>UniRef50_Q98RM8 Cluster: Translation initiation factor eIF6; n=1;
Guillardia theta|Rep: Translation initiation factor eIF6
- Guillardia theta (Cryptomonas phi)
Length = 228
Score = 161 bits (392), Expect = 1e-38
Identities = 76/228 (33%), Positives = 129/228 (56%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M +++ ++G + LTN+YC+V + Y++ ++EL I +I +V +G
Sbjct: 1 MTIKLNLYGKEDIGNYILLTNSYCIVPHDINSKNYNIIKSELDNKINIICTNVSESICVG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
+ +GN GL+VP++ T E + N LPE V +++ E L+ LGN++A N+ L PD
Sbjct: 61 NLLIGNSKGLIVPNTITFHEQNELLNFLPEKVLVKKFNENLTNLGNLLAHNELYGLSSPD 120
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
L + + E+++D L VE+ + T+ ++G+Y + GG+V P +I+D DEL + VP
Sbjct: 121 LSQSSCELISDVLGVEILKLTLGEEKMIGTYCKFNINGGIVQPFLSIEDHDELVEITGVP 180
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLNDAK 773
+ GTVN G V G+V ND FCG T TE+ +I ++ + + K
Sbjct: 181 FIGGTVNSGCSNVGKGIVCNDNLVFCGYKTNQTEMHIINNIMKKSKNK 228
>UniRef50_Q9YD27 Cluster: Translation initiation factor 6; n=1;
Aeropyrum pernix|Rep: Translation initiation factor 6 -
Aeropyrum pernix
Length = 233
Score = 140 bits (340), Expect = 3e-32
Identities = 78/217 (35%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Frame = +3
Query: 99 RVQFENNNEVGVFSKLTNTYCLVAIG-GSENFYSVFEAELAETIPVIHASVGGCRIIGRM 275
++ N +GV+ +++Y L G+++ ++ E V+ V G R++G +
Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVL 70
Query: 276 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 455
T GN G+L+P D E++ +R +L E V++ V R +ALGNVI CND L P L+
Sbjct: 71 TTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLE 128
Query: 456 KDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
K+ + ++DTL VEV ++AG VGS ++NRGGL HP + ++ LS + +VP
Sbjct: 129 KEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFE 188
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
AGT+N G + V G+V N + A G DTT EI+ I+
Sbjct: 189 AGTINFGVEFVRTGLVANSYGALVGEDTTGPEIARIQ 225
>UniRef50_Q9UYI6 Cluster: Translation initiation factor 6; n=4;
Thermococcaceae|Rep: Translation initiation factor 6 -
Pyrococcus abyssi
Length = 227
Score = 130 bits (315), Expect = 3e-29
Identities = 83/224 (37%), Positives = 115/224 (51%), Gaps = 3/224 (1%)
Frame = +3
Query: 99 RVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMT 278
R+ FEN+ +GVF T+ LV G E V L +PVI AS+ RIIG +
Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLA 62
Query: 279 VGNKNGLLVPSSTTDTELQHIRNSLPE---NVKLQRVEERLSALGNVIACNDYVALVHPD 449
GN N +LVP DTE++ I+++ E ++ + +ALGN+I ND ALV
Sbjct: 63 TGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAK 122
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
+D + + D L VEV R IAG VGS ++N+GGLVHP+ + ++ + LS L +V
Sbjct: 123 FSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVD 182
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
+ GT N G V M+ N G TT EI IE L
Sbjct: 183 VYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEALGL 226
>UniRef50_Q2NGQ7 Cluster: Translation initiation factor 6; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Translation
initiation factor 6 - Methanosphaera stadtmanae (strain
DSM 3091)
Length = 224
Score = 130 bits (314), Expect = 4e-29
Identities = 73/224 (32%), Positives = 119/224 (53%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M + + N +GV + +V+ G +++ + L +P+I + G + G
Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETL--NVPIIKTPICGSNLAG 58
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
+ GN NGLL+ EL +R ++ ++ + ++L+A+GN+I ND ALV+P
Sbjct: 59 ALMAGNSNGLLISPYVFSHELDVLRE---HDINVEIMPDKLTAIGNIIVANDNGALVNPS 115
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
L + + I+ +TL VEV +IAG +VGS A +NRG LVHP + ++ D + +L VP
Sbjct: 116 LSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVP 175
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
GTVNRG +V A ++ N G TT E++ I+ VF L
Sbjct: 176 AEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPELARIDQVFNL 219
>UniRef50_Q8PYQ3 Cluster: Translation initiation factor 6; n=3;
Methanosarcinaceae|Rep: Translation initiation factor 6
- Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 128 bits (309), Expect = 2e-28
Identities = 71/215 (33%), Positives = 117/215 (54%)
Frame = +3
Query: 102 VQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTV 281
V + + +GVF+ T LV ++ E L + V+ + G ++G ++
Sbjct: 5 VDIYDTSIIGVFATCTEDLALVPPLTKPEVCTILEEAL--DVRVVETLINGSTVVGALSR 62
Query: 282 GNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKD 461
GN NG L+P ++ E+Q R +P + + +RL+A+GN++ ND ALVHP+L
Sbjct: 63 GNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDR 117
Query: 462 TEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAG 641
EI+A TL VEV+R TIAG VG ++N+G LVHPK + +++ L + +P+ G
Sbjct: 118 ALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIG 177
Query: 642 TVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
T N G+ ++ +G++ N G +TT E+ IE
Sbjct: 178 TTNFGTQMLGSGLLANSKNFVAGSETTGPELGRIE 212
>UniRef50_Q18EU8 Cluster: Translation initiation factor 6; n=5;
Halobacteriaceae|Rep: Translation initiation factor 6 -
Haloquadratum walsbyi (strain DSM 16790)
Length = 226
Score = 126 bits (303), Expect = 9e-28
Identities = 75/217 (34%), Positives = 112/217 (51%)
Frame = +3
Query: 96 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 275
+R F + VGVF++ T+ L+ ++ AEL IP + ++GG +G +
Sbjct: 2 LRASFAGSPYVGVFARATDDVLLLRSDVDDDTADAMAAEL--DIPAVATTIGGSGTVGAL 59
Query: 276 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 455
GN+NG+LV S+ T E + I + +V + + R++A GNVI NDY A VHPDL
Sbjct: 60 ATGNENGILVTSNVTMREKEAIETTA--SVSVTELPGRINAAGNVILANDYGAYVHPDLS 117
Query: 456 KDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
+ E + LNV V R +A VG+ +NRG L HPK + + + L V
Sbjct: 118 TEAVESIESALNVPVARGKLADVRTVGTAAVATNRGVLCHPKAREPELEAIEDHLDVRAD 177
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
GTVN G+ +V +G+V G DTT E++ IE
Sbjct: 178 IGTVNYGAPLVGSGIVAGQTGYVVGEDTTGPELTRIE 214
>UniRef50_Q702B7 Cluster: Putative translation initiation factor 6;
n=1; uncultured crenarchaeote|Rep: Putative translation
initiation factor 6 - uncultured crenarchaeote
Length = 221
Score = 124 bits (299), Expect = 3e-27
Identities = 65/212 (30%), Positives = 118/212 (55%)
Frame = +3
Query: 126 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 305
VG+F++ + L+ G ++ + E + +IH S+ G R+IG MTV N NG+L+
Sbjct: 14 VGLFTRTNDKTLLLPFGFADTKTKKLK-EYLDVEEIIHVSIAGTRLIGPMTVMNNNGILL 72
Query: 306 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 485
PS+ +D E+Q ++ + + ++R+ + +A+GN+I+ ND A+V ++ ++ + DT
Sbjct: 73 PSTVSDEEIQILKQT---GLNVERLNSKFTAIGNLISANDKGAIVSNLFSEEVDQDIKDT 129
Query: 486 LNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGSDV 665
L V + + +I G V VGS +N G +VHP N + + +S LQ+ TVN GS
Sbjct: 130 LGVPIQKMSIGGFVQVGSMVVATNAGAIVHPNANDAEVNRISETLQIEAEPATVNGGSPF 189
Query: 666 VAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
+++G++ N G TT E+ +I ++
Sbjct: 190 LSSGLIANFSSVIVGNLTTGPELIMISRALKV 221
>UniRef50_Q46FA1 Cluster: Translation initiation factor 6; n=3;
Euryarchaeota|Rep: Translation initiation factor 6 -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 219
Score = 124 bits (299), Expect = 3e-27
Identities = 71/207 (34%), Positives = 109/207 (52%)
Frame = +3
Query: 126 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 305
+GVF+ T LV G ++ E L I + V G +IG ++ GN NG L
Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLDARI--VETLVNGSVVIGALSRGNSNGFLY 70
Query: 306 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 485
T E++ + V+ + + +L+A+GN++ ND ALVHP+L E++A T
Sbjct: 71 SYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIAST 125
Query: 486 LNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGSDV 665
L VEV+R TIAG VG ++N+G LVHPK + + L L ++P+ GT N G+ +
Sbjct: 126 LKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQM 185
Query: 666 VAAGMVVNDWCAFCGLDTTSTEISVIE 746
+ +G++ N G DTT E+ IE
Sbjct: 186 LGSGLLANSKNYLAGSDTTGPELGRIE 212
>UniRef50_Q60357 Cluster: Translation initiation factor 6; n=6;
Methanococcales|Rep: Translation initiation factor 6 -
Methanococcus jannaschii
Length = 228
Score = 122 bits (293), Expect = 1e-26
Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 4/228 (1%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M +R F +GV + T L+ I ++ + +E+ ET + ++GG ++G
Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEV-SEVLET-KCLQTNIGGSSLVG 60
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPEN---VKLQRVEERLSALGNVIACNDYVALV 440
++V NK GLL+P D EL I+N L EN + ++ ++ + +ALGN+I ND AL+
Sbjct: 61 SLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALI 120
Query: 441 HPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLL 620
P+L KD ++ + D+LNVEV TIA VGS ++N+G L HP + + L SL
Sbjct: 121 SPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLF 179
Query: 621 QVPLVA-GTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
+V + GT N+G+ V A ++ N A G DTT E+ +IE L
Sbjct: 180 KVEYIGKGTANKGTTSVGACIIANSKGAVVGGDTTGPELLIIEDALGL 227
>UniRef50_Q4TAX3 Cluster: Chromosome undetermined SCAF7240, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7240,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 285
Score = 119 bits (287), Expect = 7e-26
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MAVR FE NNE+G F+KLTNTYCLVAIGGSENFYSVFE EL+ETIPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFEKNNEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSETIPVVHASIAGCRIIG 60
Query: 270 RMTVG 284
RM VG
Sbjct: 61 RMCVG 65
Score = 38.7 bits (86), Expect = 0.17
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Frame = +2
Query: 338 H*KQSAGEREITTRGGTA*CPR*RHSL*RLCSTCTS*LRQRHRRNISRHIKRGSIQTNNS 517
H + SA R GG A PR RH L RL + + RH + G + +
Sbjct: 121 HQELSARRRPHPEGGGAALRPRKRHRLQRLRGAGPPRPGPGNGGDPGRHPEGGGVPPDGG 180
Query: 518 GKRTCWFLHCIEQPRRAGTPEDKYTGPG*TLFAT--PSALSCRNS*QRQ*CRSCWNGGQR 691
L ++QP R P+D + PG + A P R +R R +G QR
Sbjct: 181 RAGPGRLLLRLQQPGRPRPPQDVHRRPGRAVLAPAGPPGGGHRQPGKRGDRRG--DGRQR 238
Query: 692 LVCILRTGHNVN*DFCY*EC 751
LVC+LR G + + + EC
Sbjct: 239 LVCLLRPGDHQHRAVGHGEC 258
>UniRef50_UPI00015BAD98 Cluster: translation initiation factor 6
(aeIF-6); n=1; Ignicoccus hospitalis KIN4/I|Rep:
translation initiation factor 6 (aeIF-6) - Ignicoccus
hospitalis KIN4/I
Length = 223
Score = 118 bits (285), Expect = 1e-25
Identities = 72/214 (33%), Positives = 113/214 (52%)
Frame = +3
Query: 96 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 275
V + N +GV+ + + L+ G E+ E+ L T V+ A V ++G
Sbjct: 6 VPISIFGNPNIGVYMFANDDFALIPPGVKEDVVKKVESALKVT--VVEAKVADSTLLGLF 63
Query: 276 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 455
GN + L+VPS + EL++++ L +K+ V +L+A+GNVI CND AL HP++
Sbjct: 64 VNGNNHALVVPSIIKEYELENLKRELDLPIKV--VYSKLTAMGNVILCNDKFALFHPEMS 121
Query: 456 KDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
+++ + L V TIAG VGS ++++GGLVHP + ++ +EL QV L
Sbjct: 122 NWVKDV-TEVLGVPGETGTIAGVPTVGSVAVINDKGGLVHPDASDEELNELEKKFQVVLD 180
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEIS 737
GTVN G V G+V N+ A G TT E++
Sbjct: 181 IGTVNYGVPYVKTGLVANNKGAVVGDLTTGVEMA 214
>UniRef50_Q8TUY5 Cluster: Translation initiation factor 6; n=1;
Methanopyrus kandleri|Rep: Translation initiation factor
6 - Methanopyrus kandleri
Length = 221
Score = 118 bits (284), Expect = 2e-25
Identities = 67/222 (30%), Positives = 113/222 (50%)
Frame = +3
Query: 96 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 275
V+ + +G + + Y +VA ++ V + A + V+ +V G ++G +
Sbjct: 4 VKASVHGDPNIGAWIAASEEYAVVAPKVPDDI--VERVKEALDVEVVRTTVAGSNLVGAL 61
Query: 276 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 455
N NG L P + E++ +R V++ + +++A+GN++ ND+ ALVHPDLD
Sbjct: 62 LAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLD 118
Query: 456 KDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
E++ L V R + G VGS +++G +VHP ++ + +S +L V +
Sbjct: 119 DHALEVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVE 178
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
GTVNRGS V G+VVN A G DTT E++ +E L
Sbjct: 179 VGTVNRGSPYVGVGIVVNSKGAVVGEDTTGPELARLEDALYL 220
>UniRef50_A2BN57 Cluster: Translation initiation factor 6; n=1;
Hyperthermus butylicus DSM 5456|Rep: Translation
initiation factor 6 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 225
Score = 117 bits (281), Expect = 4e-25
Identities = 75/216 (34%), Positives = 111/216 (51%), Gaps = 1/216 (0%)
Frame = +3
Query: 117 NNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNG 296
N +GV+ N LV +E E L + VI + I G M GN NG
Sbjct: 10 NPNIGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNG 67
Query: 297 LLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEIL 476
LL+P EL ++R + + V+L+ +E R +ALGN+IA N+ ALV P +DK + +
Sbjct: 68 LLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKI 127
Query: 477 ADTLNVE-VFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNR 653
L VE ++++ +A VGS ++NRGG+VHP + + L+S+ V TVN
Sbjct: 128 KSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNF 187
Query: 654 GSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
G V AG+V ND A G +TT E+ I+ +L
Sbjct: 188 GLYFVKAGLVANDHGALVGDETTGPELMRIQQALRL 223
>UniRef50_O27648 Cluster: Translation initiation factor 6; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Translation initiation factor 6 - Methanobacterium
thermoautotrophicum
Length = 222
Score = 116 bits (280), Expect = 5e-25
Identities = 68/219 (31%), Positives = 111/219 (50%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M R+ N +GV+ +T++ L+ E F V L + V+ S+ G + G
Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNG 58
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
+ VGN NG +V + D E+ + + V+ R+ ER +A+GN++ ND A+ P
Sbjct: 59 ALAVGNSNGFVVSNQAMDREIDALAAA---GVEAVRIPERFTAVGNLVLANDNGAVASPL 115
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
L D +++ D L V+V T+AG +VGS A +NRG L++P+ + ++ + L V
Sbjct: 116 LSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVE 175
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
GTVN G ++ A V N G +TT E++ IE
Sbjct: 176 ADVGTVNHGVTLIGACSVANSNGVLVGEETTGPELARIE 214
Score = 33.5 bits (73), Expect = 6.3
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +3
Query: 120 NEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGL 299
N VG TN L+ S + E L V + G +IG +V N NG+
Sbjct: 141 NIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVN-HGVTLIGACSVANSNGV 199
Query: 300 LVPSSTTDTELQHIRNSL 353
LV TT EL I +L
Sbjct: 200 LVGEETTGPELARIEEAL 217
>UniRef50_A6QRE5 Cluster: Integrin beta 4 binding protein; n=4;
Euarchontoglires|Rep: Integrin beta 4 binding protein -
Mus musculus (Mouse)
Length = 81
Score = 115 bits (277), Expect = 1e-24
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
MAVR FENN EVG F+KLTN YCLVAIGGSENFYSVFE EL++ IPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60
Query: 270 RMTVGNKNG 296
RM VG G
Sbjct: 61 RMCVGKAGG 69
>UniRef50_O28214 Cluster: Translation initiation factor 6; n=1;
Archaeoglobus fulgidus|Rep: Translation initiation
factor 6 - Archaeoglobus fulgidus
Length = 215
Score = 110 bits (265), Expect = 3e-23
Identities = 60/217 (27%), Positives = 111/217 (51%)
Frame = +3
Query: 96 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 275
++V N +G+++K++ Y +V + E + +L + VI + G ++G M
Sbjct: 1 MKVAVNGNPLIGLYAKVSEEYAVVGVN-HEPLIDAIQEKL--DVDVIVTKIAGSELVGAM 57
Query: 276 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 455
N G +V +EL+ + SL V +E ++ GN + ND + +P+++
Sbjct: 58 MALNSRGAVVSDQVLSSELRELEKSLDVLV----IETPMTCFGNNLLINDRGGIANPEME 113
Query: 456 KDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
E +AD +++E+ + T+ G VG ++NRGGL +P N + +L + V ++
Sbjct: 114 SSVVEKVADFMDIELVKGTVGGIKTVGMAAVVTNRGGLANPNINEWEAKKLQEVAGVEVL 173
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
GTVN G+D+V +G+V N G DTT E+ ++E
Sbjct: 174 TGTVNFGTDMVGSGLVANSKGYVVGRDTTGFELGIVE 210
>UniRef50_Q2FS97 Cluster: Translation initiation factor 6; n=2;
Methanomicrobiales|Rep: Translation initiation factor 6
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 221
Score = 108 bits (260), Expect = 1e-22
Identities = 63/217 (29%), Positives = 110/217 (50%)
Frame = +3
Query: 102 VQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTV 281
V + +GVF+++ + +V E + +E L + ++ ++ IIG + V
Sbjct: 5 VSIAGDPHIGVFTRVFDDIAVVPPDVPEEVTTRYEEALK--VEIVRTTIQRSPIIGSLLV 62
Query: 282 GNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKD 461
GN NGL++ T+ E+ +L E L +EE ++A GN+I ND+ A VHP++D++
Sbjct: 63 GNNNGLVITGMATEEEIA----TLSEYRDLMLLEEGMNAAGNIILANDHFAAVHPEMDEE 118
Query: 462 TEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAG 641
+ L+D L V V T+ VG +N G +V P+T + L + +P+ G
Sbjct: 119 FMDALSDFLKVPVIPLTLGDVKTVGMAAVATNSGVVVSPRTTPGEIQRLEQVCSLPVGKG 178
Query: 642 TVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESV 752
TV G+ +V G+V N + G+ T+ E+ IE +
Sbjct: 179 TVTMGNAMVGTGLVANRYGYLAGVGTSGYELGRIEDI 215
>UniRef50_Q8ZTU1 Cluster: Translation initiation factor 6; n=5;
Thermoproteaceae|Rep: Translation initiation factor 6 -
Pyrobaculum aerophilum
Length = 220
Score = 107 bits (257), Expect = 3e-22
Identities = 70/211 (33%), Positives = 108/211 (51%)
Frame = +3
Query: 120 NEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGL 299
+ +GVF NT + E L + V +V ++G TV N NG+
Sbjct: 13 SSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTS--VARFTVARSPLLGIFTVVNDNGV 70
Query: 300 LVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILA 479
L+P + E++ + +L NV + + + +A+ N+I + VALV P L+ +++A
Sbjct: 71 LLPPLVLEEEVRLFK-ALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVA 127
Query: 480 DTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGS 659
D L VEV TIAGN LVG+ L++RG LV P+ D +LS +V + GTVNRG
Sbjct: 128 DVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGK 187
Query: 660 DVVAAGMVVNDWCAFCGLDTTSTEISVIESV 752
+ G+VVND A G +T E+ ++ V
Sbjct: 188 SFLRGGIVVNDNGALVGDETAGPELMRMQQV 218
>UniRef50_A1RXF3 Cluster: Putative translation initiation factor
eIF-6; n=1; Thermofilum pendens Hrk 5|Rep: Putative
translation initiation factor eIF-6 - Thermofilum
pendens (strain Hrk 5)
Length = 223
Score = 101 bits (243), Expect = 2e-20
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Frame = +3
Query: 126 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPV--IHASVGGCRIIGRMTVGNKNGL 299
+GV+ + + L+ E + ++AE + V SV G R++G GN NGL
Sbjct: 15 IGVYIFANDRFALIPYDAPEKL----DRKIAENLSVDAFRVSVAGTRLVGIFLAGNNNGL 70
Query: 300 LVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILA 479
+VP D+EL+H+++ L N+ + + R + +GN++ ND + L K + +A
Sbjct: 71 VVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIA 129
Query: 480 DTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGS 659
D L VE + +I VGS + +NRG + P ++ + L+V TVNRG
Sbjct: 130 DALGVECIQMSIGDVPFVGSLSVATNRGVALPPLATEEEIKSVEEALKVKANVLTVNRGK 189
Query: 660 DVVAAGMVVNDWCAFCGLDTTSTEISVIESVF 755
+ G+V N A G DTT E+ ++ +F
Sbjct: 190 MFLRTGLVANSKGALVGEDTTGHEMMQLQRIF 221
>UniRef50_A0RYC3 Cluster: Translation initiation factor; n=2;
Thermoprotei|Rep: Translation initiation factor -
Cenarchaeum symbiosum
Length = 221
Score = 101 bits (243), Expect = 2e-20
Identities = 51/174 (29%), Positives = 99/174 (56%)
Frame = +3
Query: 234 IHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVI 413
++ SV R++G + V N +G+++PS+ ++ E + + NV + ++ + +ALGN+I
Sbjct: 48 LYTSVANTRLMGTLMVLNNSGIIMPSTISEIEYEFYKKHTDLNVVV--LDTKFTALGNMI 105
Query: 414 ACNDYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQ 593
+ ND +V P ++ I+AD L +EV ++ IAG VG+ ++ GG++HP+T+ +
Sbjct: 106 SVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGE 165
Query: 594 DQDELSSLLQVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVF 755
D +S ++ V + T+N G V++G++ N G T+ EI ++ F
Sbjct: 166 DVKRISEVMGVHMEPATINGGIPFVSSGLLANKKSVVAGSFTSGPEIMMLTRAF 219
>UniRef50_Q971I4 Cluster: Translation initiation factor 6; n=4;
Sulfolobaceae|Rep: Translation initiation factor 6 -
Sulfolobus tokodaii
Length = 223
Score = 101 bits (243), Expect = 2e-20
Identities = 55/176 (31%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Frame = +3
Query: 231 VIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNV 410
+I ++ +IG GN N +L+P + D E++ I++ + +V+++ ++ R +ALGN+
Sbjct: 47 IIQTTIAKSFLIGIFVAGNNNVILLPRNVDDEEVKKIKD-IARDVRVEILDIRPTALGNI 105
Query: 411 IACNDYVALVHPDLDKDTEEILADTLNVE-VFRQTIAGNVLVGSYTALSNRGGLVHPKTN 587
I N Y AL++P+L + + ++L ++ + + +IA + VGS ++++ GLVH T
Sbjct: 106 ILTNSYGALIYPELSSIEFKKIKESLQIDNIEKGSIANIITVGSVGVITDKAGLVHIDTT 165
Query: 588 IQDQDELSSLLQVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVF 755
++ D+LS L +V + GTVN GS + +G++ N G TT EI I+ F
Sbjct: 166 EEELDKLSKLFRVKIDTGTVNFGSAFIHSGLIANRNGVLVGSATTGPEILRIQRAF 221
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 399 LGNVIACNDYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHP 578
+G I ND +V +LD +T + + +T E+ + TIA + L+G + A N ++ P
Sbjct: 14 IGIYIFTNDKYTIVPKNLDVETIQKIQETFKTEIIQTTIAKSFLIGIFVA-GNNNVILLP 72
Query: 579 KTNIQDQD 602
+ N+ D++
Sbjct: 73 R-NVDDEE 79
>UniRef50_Q6L2L0 Cluster: Translation initiation factor 6; n=3;
Thermoplasmatales|Rep: Translation initiation factor 6 -
Picrophilus torridus
Length = 217
Score = 99.5 bits (237), Expect = 8e-20
Identities = 64/219 (29%), Positives = 107/219 (48%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M +V N+N +GV+++ N + + S+ +FE L + I S+G +IG
Sbjct: 1 MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKTEVYKI--SIGNSFLIG 58
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
M N NG++V D + ++++ + + +L+A GN I ND+ AL+H
Sbjct: 59 SMLSMNSNGIVV----ADHGIDNLKSLNINGRNILSINNKLNAAGNNIIANDHAALIHKS 114
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
+ + D L VE + +IAG VGS L++RG LV + + + LS L ++
Sbjct: 115 FPDSIRKKIEDVLGVETVKGSIAGIKTVGSVAVLNDRGMLVTSEADEDEIKYLSDLFKIN 174
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIE 746
+ GT N GS+ V A ++ N G TTS E+ I+
Sbjct: 175 VKTGTANFGSNYVGASIIANSNGILVGEATTSIELGRID 213
>UniRef50_Q97CU0 Cluster: Translation initiation factor 6; n=1;
Thermoplasma volcanium|Rep: Translation initiation
factor 6 - Thermoplasma volcanium
Length = 218
Score = 97.5 bits (232), Expect = 3e-19
Identities = 70/228 (30%), Positives = 112/228 (49%)
Frame = +3
Query: 69 VKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASV 248
V RKT +M R F +G+++K + + E + F L I I S+
Sbjct: 3 VIRKTSVM--RSSF-----IGIYAKAWDDVAFITKMADEKTVNEFREVLQVDIKRI--SI 53
Query: 249 GGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDY 428
G +IG M N NG+++P + L I NV ++++++A+GN I ND+
Sbjct: 54 DGSTLIGTMIAVNSNGIVLPYGSNIDGLDGIDG---RNVLY--LKDKINAVGNDIIANDH 108
Query: 429 VALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDEL 608
A++H + + DTL VE R +I + VGS + L+++G LV+P+T+ + + L
Sbjct: 109 GAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFL 168
Query: 609 SSLLQVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESV 752
+V + +GT N GS V A +V N G DTT EI I+ V
Sbjct: 169 KDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDTTPIEIDRIDDV 216
>UniRef50_A5UL31 Cluster: Translation initiation factor 6; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Translation
initiation factor 6 - Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861)
Length = 223
Score = 96.7 bits (230), Expect = 6e-19
Identities = 58/226 (25%), Positives = 106/226 (46%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M R+ +N +GVF T+ +V + + E L + + +S+ GC +IG
Sbjct: 1 MLRRINIVDNPNIGVFILATDDLAVVPYNLLDEKVKLIEETLE--VDAVKSSISGCNLIG 58
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
+ V N NG++V D E++ + + + +A+GN++A ND A+V P
Sbjct: 59 SLAVANSNGIVVSPHVLDREVKQFEEL---GLNVATIPGNYTAVGNIVAANDTGAIVSPF 115
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
L + +++ DTL+V V ++ G+ ++GS ++N+G L+ + D + V
Sbjct: 116 LSDEAVKVIEDTLDVNVESTSMVGSDIIGSLITVTNKGFLMDKNATETEVDFARDVFGVE 175
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQLND 767
GTV RG +V A + N A ++T E++ +E D
Sbjct: 176 GDIGTVGRGISLVGACSLANSSGAIVAKESTGPEMARVEEALGFLD 221
>UniRef50_A2STI7 Cluster: Putative translation initiation factor
eIF-6; n=2; Methanomicrobiales|Rep: Putative translation
initiation factor eIF-6 - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 222
Score = 96.7 bits (230), Expect = 6e-19
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Frame = +3
Query: 126 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 305
+GV++++ +V + + F L + VI V G +IG + GN G +V
Sbjct: 13 IGVYARVFEDLAVVPVEAPKEFRDKIAEAL--DVEVIETFVQGSSVIGLLLTGNSRGFVV 70
Query: 306 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 485
D+EL+ L E + E ++A GNVI ND A+VHPD+ E++AD
Sbjct: 71 SGLIQDSELE----ILQEYGDCLLLGEEMNAAGNVILTNDSFAVVHPDMSSAMREMVADF 126
Query: 486 LNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLL---QVPLVAGTVNRG 656
L V++ + AG VG A +N G L+ ++ ++ ++L + V + G+VN G
Sbjct: 127 LKVKIIPMSFAGVGTVGMTCACTNTGVLLPARSTPEEIEKLERSIDDANVAIGTGSVNMG 186
Query: 657 SDVVAAGMVVNDWCAFCGLDTTSTEISVIESVF 755
S ++ G+++N G TT E+ IE VF
Sbjct: 187 SGLIGTGLLINSKGYLAGNATTGYELGRIEDVF 219
>UniRef50_A3DNH5 Cluster: Putative translation initiation factor
eIF-6; n=1; Staphylothermus marinus F1|Rep: Putative
translation initiation factor eIF-6 - Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1)
Length = 227
Score = 95.9 bits (228), Expect = 1e-18
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Frame = +3
Query: 96 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPV--IHASVGGCRIIG 269
VR+ N +GV+ N+ LV S V +AET+ V + + + G
Sbjct: 4 VRLSLFGNPNIGVYVFANNSIALVPPSLSSGEKKV----IAETLDVELVETKIANTILNG 59
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPEN-VKLQRVEERLSALGNVIACNDYVALVHP 446
+ VGN NG+++P D EL + N+L ++ + + + +ALGN++ CN+ +
Sbjct: 60 VLVVGNDNGIILPRIILDEELDILNNNLKKHDLNIYVSRSKNTALGNILLCNNKACIAGS 119
Query: 447 DLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQV 626
+L++ +++ L VE + I + GS ++++GG++HP + + EL + +V
Sbjct: 120 ELERQELNKISEALGVEALYKDIMNLTIPGSLAVVTDKGGVIHPDISDDENRELKEIFKV 179
Query: 627 PLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEI 734
TVN G + +G++ N+ G TT EI
Sbjct: 180 AFERATVNSGIPFIKSGLIANNKGIIVGEYTTGPEI 215
>UniRef50_Q9P9D7 Cluster: Translation initiatin factor 6; n=1;
uncultured marine group II euryarchaeote 37F11|Rep:
Translation initiatin factor 6 - uncultured marine group
II euryarchaeote 37F11
Length = 220
Score = 91.1 bits (216), Expect = 3e-17
Identities = 51/173 (29%), Positives = 93/173 (53%)
Frame = +3
Query: 243 SVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACN 422
S+GG +IG + GN G+ V T++++ ++L + +E ++ GN++ N
Sbjct: 51 SIGGSNLIGALLAGNTKGMAVADIATESDI----DALTAYGDVVVMEGGVNTAGNLLLVN 106
Query: 423 DYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQD 602
+ + P + KD +IL++ L V++ TI G +VGS ++++G L+HP ++
Sbjct: 107 EQGCVASPSIPKDGLDILSEVLGVDIISTTIGGQDVVGSLGVVNSQGVLLHPDVAPEEVL 166
Query: 603 ELSSLLQVPLVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVFQL 761
+ +L VP + GTV+ GS V AG+ ++ A G +TT E++ IE L
Sbjct: 167 LIEEILGVPPMVGTVSFGSPYVGAGICASNNGALAGSETTGPELNRIEDALGL 219
>UniRef50_A2ZIH4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 118
Score = 67.7 bits (158), Expect = 3e-10
Identities = 43/94 (45%), Positives = 53/94 (56%)
Frame = +3
Query: 462 TEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAG 641
TEE+++D L VEVFRQTI+GN+LVGS+ + P I EL
Sbjct: 44 TEEVISDVLGVEVFRQTISGNILVGSFCS---------PADAINRGSEL----------- 83
Query: 642 TVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVI 743
VAAGM VNDW AFCG DTT+TE+SV+
Sbjct: 84 --------VAAGMAVNDWAAFCGADTTATELSVV 109
>UniRef50_Q29281 Cluster: Orf protein; n=1; Sus scrofa|Rep: Orf
protein - Sus scrofa (Pig)
Length = 92
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 348 SLPENVKLQRVEERLSALGNVIACNDYVALVHPDL 452
+ P++V+++RVEERLSALGNV CNDY L P L
Sbjct: 49 AFPDSVQIRRVEERLSALGNVTTCNDYGGLSPPRL 83
>UniRef50_Q3LWK6 Cluster: Elongation initiation factor 6; n=1;
Bigelowiella natans|Rep: Elongation initiation factor 6
- Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 47.2 bits (107), Expect = 5e-04
Identities = 35/218 (16%), Positives = 95/218 (43%)
Frame = +3
Query: 90 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 269
M V++ + G + +T+ C+ + +N + ++ + + +I IG
Sbjct: 1 MIVKIYLKGIENFGNYITITDKICIFSEDVCKNIV-LSSNKIWKKLKMIPFRSYDQNFIG 59
Query: 270 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 449
M +GN NGL++ + +D +L+++ + +++K+ R+++ + G+ + +++ ++ +
Sbjct: 60 NMILGNTNGLIISNFFSDYKLRYLIKNSWDDIKILRLDDNRNNPGSFMTVSNFHTILGRN 119
Query: 450 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVP 629
L K T + + L V+ + + + + ++ + +++P
Sbjct: 120 LQKKTIQKIKSYLKTSVYLYE-NNFFTINKFNFMIFENSCLISPVYLEYYLQTKKPVELP 178
Query: 630 LVAGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVI 743
L TV+ G + ++ N T + E+ VI
Sbjct: 179 LYCTTVSNGCNYPGLALLFNKNICLLNSSTNNNELKVI 216
>UniRef50_Q74MW8 Cluster: Translation initiation factor 6; n=1;
Nanoarchaeum equitans|Rep: Translation initiation factor
6 - Nanoarchaeum equitans
Length = 208
Score = 46.0 bits (104), Expect = 0.001
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Frame = +3
Query: 99 RVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMT 278
+++ ++ +G+F + N +++ S+ + + L ++ ++ G +G
Sbjct: 5 KIKIYGSDSIGLFGYIANDIAVLSEVISKEEEKIIKDTLGLE-GIVKTTIAGTPTVGSFI 63
Query: 279 VGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDK 458
+G K+ ++VPSS + EL+ L E +++ V+ +ALGN L+ D
Sbjct: 64 IGKKDLIIVPSSIYEEELK----KLEELFRVEVVDVVNNALGNNYYYWPKKNLLFAAEDT 119
Query: 459 DTE-EILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLV 635
E ++LA LN +++ I ++ VGS + + N L+H D ++ +
Sbjct: 120 KKEAKLLAKKLNADLY--LIDTDIEVGS-SLIGNSKMLLHNPDIYIDIEDAKPV------ 170
Query: 636 AGTVNRGSDVVAAGMVVNDWCAFCGLDTTSTEISVIESVF 755
T+N G V A ++ND G TT E+ ++ +F
Sbjct: 171 --TLNMGDKFVGAAALLNDKGIVVGSKTTGIELIELQDLF 208
>UniRef50_UPI0000F1DC0B Cluster: PREDICTED: hypothetical protein; n=2;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 1020
Score = 37.1 bits (82), Expect = 0.51
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 3/170 (1%)
Frame = +3
Query: 288 KNGLLVPSSTTDTELQHIRNSLPEN-VKLQRVEERLSALGNVIACNDYVALVHPDLDKDT 464
K+G+L+P T++ E H + +N + + + + N V + ++
Sbjct: 580 KSGILIPYKTSEQEENHFADLFTQNFLSALHLVQSKQVNDKTVVANTMVQHKKRKVQGES 639
Query: 465 EEILADTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGT 644
+++L + +F++T +G ++ S L + V +L + L
Sbjct: 640 QDVLQRFITGLIFQKTASGLSIIDSSVDLKAKRKAVEAHLESMKPKDLVPARLLELFHCV 699
Query: 645 VNRGSDVVAAGMVVN--DWCAFCGLDTTSTEISVIESVFQLNDAKPTAIT 788
S A G+V N D +FCG + +++ VI + Q A T
Sbjct: 700 YETCSVKFAQGLVKNLPDDLSFCGTQLSPSDVYVICHILQHASAMKRTFT 749
>UniRef50_Q3K821 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas fluorescens PfO-1|Rep: Putative
uncharacterized protein - Pseudomonas fluorescens
(strain PfO-1)
Length = 263
Score = 37.1 bits (82), Expect = 0.51
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 240 ASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIAC 419
A V G R++ R + +STTD +++H+R ++ +++ R+ L V+
Sbjct: 180 AEVSGLRVVARSAFSPTLPFITAASTTDEQIEHLRRAMNSSLQDLPDVARILGLPEVLPA 239
Query: 420 NDYVALVHPDLDKDTEEI 473
++ LV D ++ EE+
Sbjct: 240 SESDYLVLLDYQREAEEL 257
>UniRef50_Q0UXC6 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 641
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 528 LVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPLVAGTVNRGSDVVAAG 677
L +YTAL R ++HP T+ + +D + SL + LV+ + +VAAG
Sbjct: 539 LFEAYTALCKRENILHPLTSTEFRDIVESLETLSLVSAVEGKSGSLVAAG 588
>UniRef50_Q18WJ5 Cluster: Hydantoinase/oxoprolinase; n=2;
Desulfitobacterium hafniense|Rep:
Hydantoinase/oxoprolinase - Desulfitobacterium hafniense
(strain DCB-2)
Length = 658
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 294 GLLVPSSTTDTELQHIRNS-LPENVKLQRVEERLSALGNVIACNDYVAL-VHPDLDKDTE 467
GLLV +S T T+L H+R S P NV R+ ++ A ++ +++ L +H +K +
Sbjct: 413 GLLVKASVTPTDLLHVRGSYTPGNVSAARLGIKMMAHRLGVSAEEFIDLALHQVTEKLSL 472
Query: 468 EILADTLN 491
+LA LN
Sbjct: 473 ALLASMLN 480
>UniRef50_A6PT32 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 308
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -2
Query: 499 TSTFNVSANISSVSLSKSGCTSAT*SLQAMTLPRALSRSSTRCNFTFSGRL 347
++ F + NI + L +SGC+SAT T + SS NFTFSG L
Sbjct: 187 STEFTFNGNIGELHLEQSGCSSAT-IRDCETARKMTVHSSGSSNFTFSGNL 236
>UniRef50_Q01SG3 Cluster: Outer membrane efflux protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Outer membrane
efflux protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 551
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 438 VHPDLDKDTEEILADTLNVEVFRQTIAGNV-LVGSYTALSNRGGLVHPKTNIQDQDELSS 614
V PDL + + + D L ++ R + N+ L G+YT ++ RGG+ +TN + +SS
Sbjct: 334 VRPDLKQAVQSLDVDDLGIQAARNALLPNLALTGNYT-VNGRGGVFVERTNAFNNSGVSS 392
Query: 615 LLQVPLVAG 641
+ + G
Sbjct: 393 TVLTSIPGG 401
>UniRef50_Q8MKI9 Cluster: Brca2 protein; n=8; Eukaryota|Rep: Brca2
protein - Canis familiaris (Dog)
Length = 3446
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 6 CVFRNPREESHHIVKYIIREKVKRKTKIMAVRVQFENNNE 125
C+FRN REE KY ++ K + ++ +FE N+E
Sbjct: 2858 CIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDE 2897
>UniRef50_Q0G549 Cluster: Lipopolysaccharide biosynthesis; n=1;
Fulvimarina pelagi HTCC2506|Rep: Lipopolysaccharide
biosynthesis - Fulvimarina pelagi HTCC2506
Length = 683
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 309 SSTTDTELQHIRNSLPEN---VKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILA 479
S + L+ +R S+ E V+ + E RL +G + +DY+ ++ L + ++ A
Sbjct: 228 SDALSSRLEELRTSVSEAERAVEAYKQENRLVGVGGRLVDDDYILRINDQLARSRGDVTA 287
Query: 480 DTLNVEVFRQTIAGNVLVGSYTALSNRGGLVHPKTNIQDQDELSSLLQVPL 632
VE R +V+ GS+ L + + Q+ + ++L L
Sbjct: 288 LRNKVEQMRAASVDDVVEGSFPEELTSTALNRLRDSYQELQQQEAILSTSL 338
>UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Rep:
CG1648-like - Belgica antarctica
Length = 231
Score = 33.9 bits (74), Expect = 4.8
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 129 GVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVI-HASVGGCRIIGRMTVGNKNGLLV 305
G+F K + +A +EN + E ++ +T I HAS +IG + G K+
Sbjct: 18 GLFEKKKKSATDLATEKAENAKKMAEDQIKKTSDAITHASSSATGLIGGIADGVKSDSKT 77
Query: 306 PSSTTDTELQHIRNSLPENV 365
+ TD +L +I +SL + +
Sbjct: 78 AAKATDEKLDNIESSLEDQI 97
>UniRef50_A7TSX1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 644
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = +3
Query: 114 NNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRII-GRMTVGNK 290
+N E ++TN + A+ G N Y EL +T+ G RI GR+ + N+
Sbjct: 391 SNGEKAYTCQITNLVMVCALKGYVNIYDALSGELIKTVQKTEKEPGFLRISQGRLLLSNR 450
Query: 291 NGLL-----VPSSTTDTELQHIRNSLPENVKLQRVEERLSA 398
++ +P ++T S N + +E L+A
Sbjct: 451 ENMVHYFKFIPDDNSETSKSGTGQSSSANRNTTKWKETLNA 491
>UniRef50_A0RV31 Cluster: Putative uncharacterized protein; n=1;
Cenarchaeum symbiosum|Rep: Putative uncharacterized
protein - Cenarchaeum symbiosum
Length = 1566
Score = 33.9 bits (74), Expect = 4.8
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 69 VKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEA-ELAETIPVIHAS 245
V R T A + +N G F+ T+T AI G+ N ++ +++T P +
Sbjct: 325 VGRATATDASGITSLTHNTPGEFTLGTSTVIWTAIDGAGNIAVATQSVTVSDTTPPVIDG 384
Query: 246 VGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKL 371
+GG + T GN L P + + + N P+N L
Sbjct: 385 IGGVAVEAAGTGGNTIDLGTPGVSDAVGVLSLENDAPQNYPL 426
>UniRef50_Q9V4E6 Cluster: CG1901-PA, isoform A; n=4; Sophophora|Rep:
CG1901-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 701
Score = 33.5 bits (73), Expect = 6.3
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +3
Query: 54 IIREKVKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELA----E 221
IIR K K + V F + +++ +N Y L+ + S+NF +F +L+
Sbjct: 160 IIRAKSTPKMGLKNVFESFSKQSRDSIYNASSNKYSLINVSQSKNFPQLFNKKLSVQWIN 219
Query: 222 TIPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTD-TELQHI 341
T+P+ R IG T + PS D T L+H+
Sbjct: 220 TVPIQSRQTRETRDIGLETKRHSK----PSKRVDETRLKHL 256
>UniRef50_Q24HL4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 654
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 164 KAVCVC*FTEHS--HFIIIFKLNANRHDFGFSFNLFPYYVFHNMMRFFTW 21
K + C FT++ FI + N H+F +N PYYV +N+ F+TW
Sbjct: 530 KKIMNCRFTQNDVIQFIQFCEENKVTHNFVDLYNYLPYYVANNIF-FYTW 578
>UniRef50_Q864S8 Cluster: Breast cancer type 2 susceptibility protein
homolog; n=7; Euteleostomi|Rep: Breast cancer type 2
susceptibility protein homolog - Felis silvestris catus
(Cat)
Length = 3372
Score = 33.5 bits (73), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 6 CVFRNPREESHHIVKYIIREKVKRKTKIMAVRVQFENNNE 125
C+FRN REE KY ++ K + ++ +FE ++E
Sbjct: 2783 CIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDE 2822
>UniRef50_Q6A724 Cluster: Putative uncharacterized protein; n=1;
Propionibacterium acnes|Rep: Putative uncharacterized
protein - Propionibacterium acnes
Length = 139
Score = 33.1 bits (72), Expect = 8.3
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +3
Query: 375 RVEERLSALGNVIACNDYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALS 554
R+ + L+ V N+ L PD + LAD L+ F T+ GN GS T +S
Sbjct: 57 RLPKGLAVTLRVDHVNNITLLTGPDTSGKVHDFLADNLSASGF--TVTGNA-NGSLTFIS 113
Query: 555 NRGGLVHPKTNIQDQDELSSL 617
NRG DE + L
Sbjct: 114 NRGDTKGWSGGFTSSDEAAGL 134
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,261,103
Number of Sequences: 1657284
Number of extensions: 16985120
Number of successful extensions: 46002
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 43812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45894
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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