Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3g06
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.19
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.19
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.77
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.77
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.77
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 25 0.77
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 3.1
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 5.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 7.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 7.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.2
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.1 bits (57), Expect = 0.19
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 509 LDLRNSRTSRSDSGPVLGSIK-HTIMLSTSNRNMPLSSTVLVGVIPLNTINMDLNSLIS 336
LDLRN+ R +S L HT+ LS N+ + + + G+ LN + + N++ S
Sbjct: 364 LDLRNNSIDRIESNAFLPLYNLHTLELS-DNKLRTVGAQLFNGLFVLNRLTLSGNAIAS 421
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 27.1 bits (57), Expect = 0.19
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 396 CRGQWHVAIRSRQHDCVLDRPQHGA--AVRTRGARIAQI 506
C G + V + S + LD P H A ++R RGA I I
Sbjct: 181 CIGAFDVTLESGERVTFLDTPGHAAFISMRHRGAHITDI 219
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.77
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 154 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 264
K Q + KP + +V N G IFLG YD
Sbjct: 487 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 523
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.77
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 262 DYGVKSPNAAS-TSSNVTMTRGTAN 333
+Y + +AAS TSS V +TRGT N
Sbjct: 6 NYALDVSSAASKTSSKVMLTRGTVN 30
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.77
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 154 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 264
K Q + KP + +V N G IFLG YD
Sbjct: 487 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 523
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 25.0 bits (52), Expect = 0.77
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 154 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 264
K Q + KP + +V N G IFLG YD
Sbjct: 113 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 149
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 475 SEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN**NKKVY 654
+ERE R+ R+++ + E + E + ++ T + NYK N NKK+Y
Sbjct: 52 NEREYRKYRETSKERSRDRTERERS--REPKIISSLSNNTIHNNNYKYNYNNNNYNKKLY 109
Query: 655 LYIIY 669
I Y
Sbjct: 110 YNINY 114
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 475 SEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN**NKKVY 654
+ERE R+ R+++ + E + E + ++ T + NYK N NKK+Y
Sbjct: 52 NEREYRKYRETSKERSRDRTERERS--REPKIISSLSNNTIHNNNYKYNYNNNNYNKKLY 109
Query: 655 LYIIY 669
I Y
Sbjct: 110 YNINY 114
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 475 SEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN**NKKVY 654
+ERE R+ R+++ + E + E + ++ T + NYK N NKK+Y
Sbjct: 52 NEREYRKYRETSKERSRDRTERERS--REPKIISSLSNNTIHNNNYKYNYNNNNYNKKLY 109
Query: 655 LYIIY 669
I Y
Sbjct: 110 YNINY 114
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 475 SEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN**NKKVY 654
+ERE R+ R+++ + E + E + ++ T + NYK N NKK+Y
Sbjct: 52 NEREYRKYRETSKERSRDRTERERS--REPKIISSLSNNTIHNNNYKYNYNNNNYNKKLY 109
Query: 655 LYIIY 669
I Y
Sbjct: 110 YNINY 114
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 389 VGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAF-GDL 273
+G +P+N IN+ L I ++ +LL ++ A+ GD+
Sbjct: 72 IGSVPVNNINLILLQNIIDICWITMVYSLLGIIIAYTGDV 111
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 5.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +1
Query: 19 LNSLTEASPSLGQSSESVESDENK----RLNVKLNNARVANLR 135
++SL E SS SVE EN+ LN + + R+ +LR
Sbjct: 326 ISSLDEIRTRYKDSSSSVEGWENRATIPELNEEFRDLRLQDLR 368
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 186 INKIKEHDTVLVVNIEKSG 204
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 186 INKIKEHDTVLVVNIEKSG 204
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 186 INKIKEHDTVLVVNIEKSG 204
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 191 INKIKEHDTVLVVNIEKSG 209
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 186 INKIKEHDTVLVVNIEKSG 204
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 632 INKTKKSIYILFINIQKFG 688
INK K+ +L +NI+K G
Sbjct: 186 INKIKEHDTVLVVNIEKSG 204
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,424
Number of Sequences: 438
Number of extensions: 5066
Number of successful extensions: 27
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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