Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3f21
(319 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 194 2e-49
UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7; Nucleopolyhe... 122 1e-27
UniRef50_Q91BX9 Cluster: 39K Protein; n=4; Nucleopolyhedrovirus|... 92 2e-18
UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai NPV... 89 2e-17
UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep... 84 5e-16
UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39... 82 2e-15
UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3; Nucleopolyhedro... 81 4e-15
UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep... 80 1e-14
UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata nucleop... 80 1e-14
UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear pol... 79 3e-14
UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura NPV... 73 9e-13
UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar MNPV... 60 7e-09
UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 - X... 34 0.70
UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1; ... 34 0.70
UniRef50_A0LC74 Cluster: Putative uncharacterized protein precur... 30 8.7
UniRef50_Q22G25 Cluster: Putative uncharacterized protein; n=2; ... 30 8.7
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 194 bits (474), Expect = 2e-49
Identities = 90/105 (85%), Positives = 94/105 (89%)
Frame = +3
Query: 3 SYNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTK 182
SYNKS MDQL IV F ERKNINY L V+PVMQDER MS+RKKKVIN+ KYILFNSWYTK
Sbjct: 29 SYNKSNMDQLAVIVNFLERKNINYILNVVPVMQDERKMSKRKKKVINNNKYILFNSWYTK 88
Query: 183 IKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKMADRSTS 317
IKQPEWPSSPAMWDLV N PELADFVFIFDHTEK+GKKMADRSTS
Sbjct: 89 IKQPEWPSSPAMWDLVKNKPELADFVFIFDHTEKLGKKMADRSTS 133
>UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 261
Score = 122 bits (295), Expect = 1e-27
Identities = 53/105 (50%), Positives = 73/105 (69%)
Frame = +3
Query: 3 SYNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTK 182
++NKS + L + F E+K++NY + +P DER S+R K+V N YILFNS+YTK
Sbjct: 28 AFNKSNFEYLKTCINFFEKKSVNYTVVALPCSGDERKASKRPKRVNNHNMYILFNSFYTK 87
Query: 183 IKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKMADRSTS 317
I++PEWP+SP MWD V EL+DFV +FDHT+K+GK + RS S
Sbjct: 88 IRRPEWPNSPTMWDTVKAHKELSDFVRVFDHTQKLGKSITSRSAS 132
>UniRef50_Q91BX9 Cluster: 39K Protein; n=4;
Nucleopolyhedrovirus|Rep: 39K Protein - Helicoverpa
armigera NPV
Length = 312
Score = 92.3 bits (219), Expect = 2e-18
Identities = 39/96 (40%), Positives = 66/96 (68%)
Frame = +3
Query: 6 YNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTKI 185
YNK+ ++ L+ ++ E++ I Y + VMP + D++ +S++ KK+ ++ KYILFN++ +KI
Sbjct: 18 YNKTHIETLVNVINLFEKQKIGYQVHVMPTIADDKKLSKKIKKITSNNKYILFNTFISKI 77
Query: 186 KQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGK 293
KQ WPSS +W+LV + F+ IFD+ EK+GK
Sbjct: 78 KQSGWPSSSHLWNLVKVHNQSDAFLHIFDYMEKIGK 113
>UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai
NPV|Rep: 39K protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 261
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +3
Query: 6 YNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTKI 185
+NK+ D L+ + E+K + Y L P+ D++ ++R KK I++ KYILFNSWY KI
Sbjct: 18 HNKTRNDILMQSINMYEKKKVPYVLLTSPLYTDDKKSAKRAKKPISNNKYILFNSWYHKI 77
Query: 186 KQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGK 293
K+ +PSS MW+L+ N + +FV +FD EK+GK
Sbjct: 78 KEDHYPSSSQMWNLMKN--KSTEFVNLFDFVEKVGK 111
>UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep:
39k/pp31 - Mamestra configurata NPV-A
Length = 287
Score = 84.2 bits (199), Expect = 5e-16
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 13/111 (11%)
Frame = +3
Query: 9 NKSXMDQLIAIVXFXERKNINYXLXVMPV-------------MQDERXMSERKKKVINSX 149
+K+ ++Q+ A++ + ERK I + L MPV +++ + + KK+I+
Sbjct: 21 DKAHIEQVHAVISYLERKKIKHNLFSMPVKDNDTVQMVHGIIFNNDKKNARKNKKMISYN 80
Query: 150 KYILFNSWYTKIKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKMA 302
KYILFNSWYTK +Q WP+S MW+++ + P FV IFD EK+GK +A
Sbjct: 81 KYILFNSWYTKNRQETWPNSHTMWNIMKSQPVAKPFVDIFDFMEKLGKTIA 131
>UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39K -
Ecotropis obliqua NPV
Length = 293
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/96 (38%), Positives = 57/96 (59%)
Frame = +3
Query: 6 YNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTKI 185
YNKS + +A + E+K + Y + V + +R + +R KK+I + KYILFNSWYTK
Sbjct: 20 YNKSDNEINVAKIKLFEKKKMTYNITVNEIHNYDRKIVKRGKKMITNNKYILFNSWYTKN 79
Query: 186 KQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGK 293
++ W SS MW+ + N F+ +FD+ EK+ K
Sbjct: 80 RKSHWLSSHDMWNYMKNNAACKTFISLFDYIEKLSK 115
>UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3;
Nucleopolyhedrovirus|Rep: ORF120 39K / pp31 - Spodoptera
exigua MNPV
Length = 317
Score = 81.4 bits (192), Expect = 4e-15
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Frame = +3
Query: 9 NKSXMDQLIAIVXFXERKNINYXLXVMP-------------VMQDERXMSERKKKVINSX 149
+K+ M+ + A++ E+K I Y + MP V+ ++ ++R KK I++
Sbjct: 26 DKAHMEHVTAVINTLEKKKIKYKIIPMPMCGEDGLEITFAIVIMVDKKNAKRNKKSISNN 85
Query: 150 KYILFNSWYTKIKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKMADRSTS 317
KYILFNSWYTK + P WP+S MW+L+ FV IFD EK+GK + + S
Sbjct: 86 KYILFNSWYTKNRNPSWPNSHTMWNLIKTQFLAKPFVDIFDFMEKIGKSITTKEAS 141
>UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep:
39K/pp31 - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 317
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Frame = +3
Query: 6 YNKSXMDQLIAIVXFXERKNINYXLXVMPVMQD-------------ERXMSERKKKVINS 146
++++ + + + E+K I Y + +MPV D ++ +++ KK+I++
Sbjct: 24 FDRNNFENVNTTIQLLEKKKIKYRITMMPVYGDNGLEFTVAIILLHDKRTAKKTKKMISN 83
Query: 147 XKYILFNSWYTKIKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKM 299
KYILFNSWYTK KQ WP+S MW+++ + + FV IFD EK+GK +
Sbjct: 84 NKYILFNSWYTKNKQSVWPNSHMMWNIMKSHSNIKPFVLIFDFMEKLGKSI 134
>UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: 39K/PP31 - Clanis
bilineata nucleopolyhedrosis virus
Length = 281
Score = 79.8 bits (188), Expect = 1e-14
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +3
Query: 9 NKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTKIK 188
NK+ D + A + E+K + Y V V ++ ++ KK+IN+ KYILFNSWYTKI+
Sbjct: 21 NKTDFDIIAAKIKLFEKKKVAYRFKVSEVFNMDKKSVKKVKKIINNNKYILFNSWYTKIR 80
Query: 189 QPEWPSSPAMWDLVXNTPELADFVFIFDHTEKM 287
+ W +S MW+L+ ++ FV IFD EK+
Sbjct: 81 KSNWLNSHDMWNLMKDSLLAKPFVDIFDFMEKL 113
>UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: 39K - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 324
Score = 78.6 bits (185), Expect = 3e-14
Identities = 34/99 (34%), Positives = 62/99 (62%)
Frame = +3
Query: 3 SYNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTK 182
++NK+ M ++ E+ I Y + P+ QD++ +++ KK+ +S KYILFN++ +K
Sbjct: 16 AHNKTNMAHFKQLLIMFEKSKIPYHASINPMPQDDKKTNKKPKKITSSNKYILFNTFVSK 75
Query: 183 IKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKM 299
IKQP WP+S ++W+ P A F+ IF++ E + K++
Sbjct: 76 IKQPGWPNSYSLWNSTKADPTNATFLKIFNYIETITKQI 114
>UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura
NPV|Rep: 39k protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 322
Score = 73.3 bits (172), Expect = 9e-13
Identities = 35/98 (35%), Positives = 57/98 (58%)
Frame = +3
Query: 6 YNKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWYTKI 185
+NK+ M L + E+ + Y + V + DE+ + KK+I+S KYILFN++ +KI
Sbjct: 46 FNKTNMQFLKHALVMCEKMKVPYYIGVTALPCDEKKTHRKPKKIISSNKYILFNTFVSKI 105
Query: 186 KQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKM 299
KQP WPSS +W+ + F+ +F+H E + KK+
Sbjct: 106 KQPGWPSSYRLWNDTKSDSRNDKFLQMFNHVEDLIKKI 143
>UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar
MNPV|Rep: Ld-39K/pp31 - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 264
Score = 60.5 bits (140), Expect = 7e-09
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +3
Query: 9 NKSXMDQLIAIVXFXERKNINYXLXVMPVMQDERXMSERKKKVINSXKYILFNSWY--TK 182
NKS + + + E+K I+Y + V V ++ +R KK ++ KYILFNSWY K
Sbjct: 24 NKSDWETNLCKIRLFEKKKISYRIKVSEVYGPDKKTVKRGKKNNHNNKYILFNSWYNSNK 83
Query: 183 IKQPEWPSSPAMWDLVXNTPELADFVFIFDHTEKMGKKM 299
++ SS MW+ + + A + +FD+ EK+GK +
Sbjct: 84 ERRDNALSSHDMWNHIKSHSSAALVIGLFDYMEKLGKSI 122
>UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 295
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 114 MSERKKKVINSXKYILFNSWYTKIKQPEWPSSPAMWDLVXNTPE 245
+ ++K + ++ KYILF +++K EW SS MW L+ P+
Sbjct: 83 LKKKKPLLYSNNKYILFTQLISRLKL-EWKSSNKMWSLMGVNPD 125
>UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 544
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 150 KYILFNSWYTKIKQPEWP-SSPAMWDLVXNTPELADFVFIFDHTEKMGKKMA 302
K +L N+ +++QP+ P ++ WDL TP+ +D F+ K+G+++A
Sbjct: 57 KTVLMNNLAERMRQPDSPYNAVVFWDLGHQTPD-SDHAFLKSFCHKLGQELA 107
>UniRef50_A0LC74 Cluster: Putative uncharacterized protein
precursor; n=1; Magnetococcus sp. MC-1|Rep: Putative
uncharacterized protein precursor - Magnetococcus sp.
(strain MC-1)
Length = 571
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 84 VMPVMQDERXMSERKKKVINSXKYILFNSWYTKIKQPEWPS 206
V P+M + R ++E+K++ N +LF++ K+ Q + S
Sbjct: 141 VQPIMSELRQLTEKKRRTQNLKNRVLFHTQQLKVAQATYES 181
>UniRef50_Q22G25 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 367
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -1
Query: 247 NSGVXFTKSHMAGLLGHSGCLILVYQLLNKMYLXLLITFFL 125
N F +S ++ ++GC+++ +Q + K Y L+T L
Sbjct: 324 NGSNVFVESKKTNIICNNGCVVISFQGITKFYFGFLLTLLL 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,228,007
Number of Sequences: 1657284
Number of extensions: 5113762
Number of successful extensions: 11075
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11070
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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