Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f21
         (319 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55675-1|CAA39210.1|  454|Homo sapiens tyrosine  aminotransferas...    28   5.2  
X52520-1|CAA36750.1|  454|Homo sapiens protein ( Human mRNA for ...    28   5.2  
X52509-1|CAA36749.1|  454|Homo sapiens tyrosine aminotransferase...    28   5.2  
BC130534-1|AAI30535.1|  454|Homo sapiens tyrosine aminotransfera...    28   5.2  

>X55675-1|CAA39210.1|  454|Homo sapiens tyrosine  aminotransferase
           protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 314 CRSVGHFFTHLFSVIKNEHKICQFGRVXHQIPHGRATRPLGLLDLSV 174
           CR+ G F+ +  S +K+   +C +G +   IP  R  RP G + L V
Sbjct: 332 CRTPGEFYHNTLSFLKSNADLC-YGALA-AIPGLRPVRPSGAMYLMV 376


>X52520-1|CAA36750.1|  454|Homo sapiens protein ( Human mRNA for
           tyrosine aminotransferase (TAT) (EC 2.6.1.5). ).
          Length = 454

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 314 CRSVGHFFTHLFSVIKNEHKICQFGRVXHQIPHGRATRPLGLLDLSV 174
           CR+ G F+ +  S +K+   +C +G +   IP  R  RP G + L V
Sbjct: 332 CRTPGEFYHNTLSFLKSNADLC-YGALA-AIPGLRPVRPSGAMYLMV 376


>X52509-1|CAA36749.1|  454|Homo sapiens tyrosine aminotransferase
           protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 314 CRSVGHFFTHLFSVIKNEHKICQFGRVXHQIPHGRATRPLGLLDLSV 174
           CR+ G F+ +  S +K+   +C +G +   IP  R  RP G + L V
Sbjct: 332 CRTPGEFYHNTLSFLKSNADLC-YGALA-AIPGLRPVRPSGAMYLMV 376


>BC130534-1|AAI30535.1|  454|Homo sapiens tyrosine aminotransferase
           protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 314 CRSVGHFFTHLFSVIKNEHKICQFGRVXHQIPHGRATRPLGLLDLSV 174
           CR+ G F+ +  S +K+   +C +G +   IP  R  RP G + L V
Sbjct: 332 CRTPGEFYHNTLSFLKSNADLC-YGALA-AIPGLRPVRPSGAMYLMV 376


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,300,533
Number of Sequences: 237096
Number of extensions: 796923
Number of successful extensions: 1279
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)