Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3f20
(582 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4A0E Cluster: PREDICTED: similar to proteasome... 216 4e-55
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 200 3e-50
UniRef50_P28070 Cluster: Proteasome subunit beta type-4 precurso... 169 5e-41
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 163 2e-39
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 157 1e-37
UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schi... 130 2e-29
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 124 2e-27
UniRef50_Q0UWV2 Cluster: Predicted protein; n=4; Pezizomycotina|... 116 5e-25
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 110 3e-23
UniRef50_Q5K974 Cluster: Proteasome subunit beta type; n=1; Filo... 108 8e-23
UniRef50_Q556Q0 Cluster: Proteasome subunit beta type; n=2; Dict... 106 4e-22
UniRef50_Q018W2 Cluster: Proteasome subunit beta type; n=2; Ostr... 102 5e-21
UniRef50_P30657 Cluster: Proteasome component PRE4; n=13; Saccha... 97 4e-19
UniRef50_P90868 Cluster: Putative uncharacterized protein pbs-7;... 95 1e-18
UniRef50_Q7DLR9 Cluster: Proteasome subunit beta type-4 precurso... 95 1e-18
UniRef50_UPI0000499BD3 Cluster: proteasome beta subunit; n=2; En... 90 4e-17
UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6; Plas... 84 3e-15
UniRef50_UPI00006CF83A Cluster: Proteasome A-type and B-type fam... 81 2e-14
UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit, thr... 73 7e-12
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 73 7e-12
UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Para... 71 3e-11
UniRef50_Q8I6Y3 Cluster: Proteasome subunit beta type; n=8; Tryp... 61 2e-08
UniRef50_Q4MZR6 Cluster: 20S proteasome beta 7 subunit, putative... 60 4e-08
UniRef50_A7AVH7 Cluster: Proteasome subunit beta type 4; n=1; Ba... 60 5e-08
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 56 5e-07
UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=... 46 5e-04
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 46 7e-04
UniRef50_A4FNF9 Cluster: Diguanylate cyclase/phosphodiesterase w... 44 0.003
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 44 0.003
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 42 0.011
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 42 0.014
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 41 0.019
UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like prote... 41 0.025
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 40 0.032
UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1; Ence... 40 0.032
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 40 0.043
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 40 0.043
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 40 0.043
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 40 0.043
UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4; Para... 39 0.075
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 39 0.075
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 39 0.075
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 39 0.099
UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1; En... 38 0.13
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 38 0.13
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 38 0.17
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 38 0.23
UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila melanogaster|... 37 0.40
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 36 0.53
UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;... 36 0.70
UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|R... 36 0.70
UniRef50_Q6RKE3 Cluster: Polyketide synthase; n=2; Fungi/Metazoa... 36 0.70
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 36 0.92
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 35 1.2
UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8; Acon... 35 1.2
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 35 1.2
UniRef50_Q1D018 Cluster: Beta-ketoacyl synthase family protein; ... 35 1.6
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 35 1.6
UniRef50_Q4UER7 Cluster: Proteasome subunit y, putative; n=4; Pi... 34 2.1
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 34 2.1
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 34 2.8
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 33 3.7
UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;... 33 4.9
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 33 6.5
UniRef50_Q9JMS5 Cluster: Uncharacterized protein yuaO precursor;... 33 6.5
UniRef50_Q15NF1 Cluster: Diacylglycerol kinase, catalytic region... 32 8.6
UniRef50_A6NWL4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 32 8.6
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 32 8.6
UniRef50_Q6L1Z4 Cluster: Alanyl-tRNA synthetase; n=2; Thermoplas... 32 8.6
>UniRef50_UPI00015B4A0E Cluster: PREDICTED: similar to proteasome
subunit N3; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to proteasome subunit N3 - Nasonia vitripennis
Length = 262
Score = 216 bits (527), Expect = 4e-55
Identities = 96/153 (62%), Positives = 120/153 (78%)
Frame = +1
Query: 124 DTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKG 303
D +PTP WQNGP+PGA YNFPG T + +G+Q + SP+TT T+VIG++F G
Sbjct: 8 DYFSPTPFWQNGPAPGAIYNFPG--PTASSGTNGMQ----RTQSPMTTGTSVIGLQFKDG 61
Query: 304 CVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGD 483
VIA D L SYGSLARFR+C RV+KVND I+LG GGDYAD+QYL+ II+QKI+DE C+ D
Sbjct: 62 IVIAADVLASYGSLARFRNCERVIKVNDNIILGAGGDYADYQYLRSIIEQKILDERCLDD 121
Query: 484 GLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
G LKP+SLHCWLTRV+YNKRSK DPLWN++++
Sbjct: 122 GFTLKPKSLHCWLTRVMYNKRSKFDPLWNNFII 154
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 200 bits (487), Expect = 3e-50
Identities = 89/153 (58%), Positives = 116/153 (75%)
Frame = +1
Query: 124 DTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKG 303
D P PLWQNGP PGAFY+FPGN++ G Q S +P+TT T+V+G++F G
Sbjct: 7 DWQTPAPLWQNGPVPGAFYHFPGNSTHFKVG--GYQ----RSQAPMTTGTSVVGIQFKNG 60
Query: 304 CVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGD 483
+IA D LGSYGSLAR+R+ RVMKVND I+LG GGDYAD+Q LK I++KI++E C+ D
Sbjct: 61 ILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHIERKILEEECLDD 120
Query: 484 GLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
GL LKP++LHCWLTRVLYN+RS+ DP WN++++
Sbjct: 121 GLSLKPKALHCWLTRVLYNRRSQFDPFWNNFII 153
>UniRef50_P28070 Cluster: Proteasome subunit beta type-4 precursor;
n=40; Eumetazoa|Rep: Proteasome subunit beta type-4
precursor - Homo sapiens (Human)
Length = 264
Score = 169 bits (410), Expect = 5e-41
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 163 bits (397), Expect = 2e-39
Identities = 77/151 (50%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Frame = +1
Query: 142 PLWQNGPSPGAFYNFPGNA----STIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCV 309
P W NGP+PGAFYNFPG+ + A S + T S P+TT T+V+G+ F G +
Sbjct: 12 PFWSNGPAPGAFYNFPGSTVAGGAMQARSETPGEFGTQRSYYPVTTGTSVVGLMFKDGVI 71
Query: 310 IAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGL 489
IA D L SYGSLARF D RV ++ND +LG GGD+ADFQY+K I QK+ID+ C+ D
Sbjct: 72 IAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHIDQKVIDDQCLDDKN 131
Query: 490 QLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
++KPRS + WLTRV+YN+RS+ PL+ V+
Sbjct: 132 EMKPRSFYNWLTRVMYNRRSEFQPLYLDLVI 162
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 157 bits (382), Expect = 1e-37
Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Frame = +1
Query: 142 PLWQNGPSPGAFYNFPGNASTIAPSRHGVQDF----TAHSASPITTTTTVIGVKFDKGCV 309
P+WQNGP+PG FYNF G + + + T HS + TT T+V+G+++D G +
Sbjct: 11 PMWQNGPAPGEFYNFTGGQTPVQQLPRELTTMGPYGTKHSTASSTTGTSVLGIRYDSGVM 70
Query: 310 IAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGL 489
+A DTL SYGS+AR+++ RV KVN ILLG GD+AD Q +K I QK+I++ C D +
Sbjct: 71 LAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNI 130
Query: 490 QLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
++KP+SL W+TRVLYN+RS+M+PL+ VV
Sbjct: 131 EMKPKSLASWMTRVLYNRRSRMNPLYIDVVV 161
>UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 248
Score = 130 bits (314), Expect = 2e-29
Identities = 54/113 (47%), Positives = 83/113 (73%)
Frame = +1
Query: 244 HSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYAD 423
H+ +PI T T+VIG+K+ G V+A D L SYGSLA++ D R+ KVN+ ++ C GD AD
Sbjct: 22 HTMTPICTGTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCCSGDVAD 81
Query: 424 FQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
FQ+LK +++ ++ + DG +L P +LH W+TR+LYN+RS+++PLWN+Y+V
Sbjct: 82 FQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLV 134
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 124 bits (298), Expect = 2e-27
Identities = 58/150 (38%), Positives = 91/150 (60%)
Frame = +1
Query: 133 NPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVI 312
+P W + P+ A+ N G S + D T+H++ PI T T+V+G+K+ G ++
Sbjct: 5 HPGQSWSSQPNQ-AYVNM-GTPSFSTAAASSSSDPTSHTSQPIVTGTSVLGIKYKDGIML 62
Query: 313 AGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQ 492
A DTL SYGSLARF D R+ + L+G GD +D+QY++ ++ + I E DG
Sbjct: 63 ATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHMLNKLITSEDVAADGHN 122
Query: 493 LKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
L P ++ +L RV+Y +RSK++PLWNS+V+
Sbjct: 123 LTPTQIYAYLARVMYQRRSKINPLWNSFVL 152
>UniRef50_Q0UWV2 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 260
Score = 116 bits (278), Expect = 5e-25
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = +1
Query: 211 PSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDL 390
PS H+ SPI T T+V+ KF G VIA D L SYGSLARF D R+ K ND
Sbjct: 21 PSHFQTAGPNQHTQSPIVTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDE 80
Query: 391 ILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWN 570
+++G GGD +D QYL ++ I E+ + L ++LH +L +V+YN+RSK DPLWN
Sbjct: 81 VVVGFGGDVSDMQYLDRLLNSLDIRETYSSNETALNAKNLHTYLAKVMYNRRSKFDPLWN 140
Query: 571 SYVV 582
++
Sbjct: 141 HLLI 144
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 110 bits (264), Expect = 3e-23
Identities = 49/112 (43%), Positives = 75/112 (66%)
Frame = +1
Query: 247 SASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADF 426
+ PI T ++V+ +KF G +IA D L SYGSLARF D R+ KV D ++G GGD +D+
Sbjct: 36 TVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDY 95
Query: 427 QYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
Q ++ ++++ I E GDG L+P +H +L++VLY +R+K+DP WN +V
Sbjct: 96 QQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIV 147
>UniRef50_Q5K974 Cluster: Proteasome subunit beta type; n=1;
Filobasidiella neoformans|Rep: Proteasome subunit beta
type - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 280
Score = 108 bits (260), Expect = 8e-23
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Frame = +1
Query: 133 NPTPLW-QNGPSPGAF--YN-FP-GNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFD 297
N LW Q P+ AF YN FP G S H +H+ P+ T T+V+G+KFD
Sbjct: 5 NHPALWKQPAPANSAFNDYNTFPLGQTQRHNTSSH--HGPMSHTQQPLVTGTSVLGIKFD 62
Query: 298 KGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCV 477
KG +IA D LGSYGSLARFRD R+ + LLG GD +D+Q+LK + + +ES +
Sbjct: 63 KGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLLGVAGDMSDYQWLKRELDGLLREESAL 122
Query: 478 G---DGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
L P +++ L+ + Y +RSK+DP+WN+ +V
Sbjct: 123 SLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAVLV 160
>UniRef50_Q556Q0 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 259
Score = 106 bits (254), Expect = 4e-22
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 256 PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYL 435
PI T T+VI +K+DKG V+ D L SYGSLARF R+ K ++G G+Y+DFQ +
Sbjct: 40 PIVTGTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSI 99
Query: 436 KDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+ + + D+ C+ DG +L + +L RVLYN+R++ +PLWN+ VV
Sbjct: 100 TNTLNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVV 148
>UniRef50_Q018W2 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 289
Score = 102 bits (245), Expect = 5e-21
Identities = 44/110 (40%), Positives = 70/110 (63%)
Frame = +1
Query: 253 SPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
+P T T+ +G+K+ G ++A DTL YGS R++ RV +VND + G+ +DF Y
Sbjct: 68 TPYVTGTSALGLKYAGGVLLATDTLACYGSTKRYKSVERVKRVNDKCAIAFTGELSDFAY 127
Query: 433 LKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+ D++++ ++ C DG ++ +LTRV+YN+RSK DPLWNS+VV
Sbjct: 128 VCDLLEELTTEDFCEDDGTTRDAEEIYQYLTRVMYNRRSKFDPLWNSFVV 177
>UniRef50_P30657 Cluster: Proteasome component PRE4; n=13;
Saccharomycetales|Rep: Proteasome component PRE4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 266
Score = 96.7 bits (230), Expect = 4e-19
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +1
Query: 244 HSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYAD 423
++ PI T T+VI +K+D G +IA D LGSYGSL RF R++ V D ++G GD +D
Sbjct: 33 NTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISD 92
Query: 424 FQY----LKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
Q+ LKD++ + D L+P + +L V+Y +RSKM+PLWN+ +V
Sbjct: 93 MQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
>UniRef50_P90868 Cluster: Putative uncharacterized protein pbs-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pbs-7 - Caenorhabditis elegans
Length = 236
Score = 95.1 bits (226), Expect = 1e-18
Identities = 44/117 (37%), Positives = 76/117 (64%)
Frame = +1
Query: 232 DFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGG 411
D + +P T T+VI +++ G V+ D + SYG +AR+++ R KVND +L+ GG
Sbjct: 5 DEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGG 64
Query: 412 DYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
D+ADF +L+++I+++++ + P++LH +LT +LY KR KM+P+WN+ VV
Sbjct: 65 DHADFHWLQNVIERQVLLWKRFDQ--DIGPKALHGYLTSLLYAKRCKMNPVWNTLVV 119
>UniRef50_Q7DLR9 Cluster: Proteasome subunit beta type-4 precursor;
n=8; Magnoliophyta|Rep: Proteasome subunit beta type-4
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 246
Score = 94.7 bits (225), Expect = 1e-18
Identities = 40/109 (36%), Positives = 69/109 (63%)
Frame = +1
Query: 256 PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYL 435
P T T+++ +K+ G ++A D GSYGS R+++ RV + LLG G+ +DFQ +
Sbjct: 27 PYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEI 86
Query: 436 KDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+ + ++++ DG L P+ +H +LTRV+YN+R+K +PLWN+ V+
Sbjct: 87 LRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVL 135
>UniRef50_UPI0000499BD3 Cluster: proteasome beta subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 225
Score = 89.8 bits (213), Expect = 4e-17
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T +V+G+K++ G +IA DTLGSYGS+A F+D RV+K+ ++ G+Y+DF
Sbjct: 13 AEVVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAGSGEYSDFI 72
Query: 430 YLKDIIQQKII-DESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
L + +Q+K+ DE C G KP L+ + R+LY R PL+ + +V
Sbjct: 73 ELNETLQKKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIV 124
>UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium falciparum
Length = 265
Score = 83.8 bits (198), Expect = 3e-15
Identities = 37/111 (33%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYL 435
P+ T T+VI +K+ G +IA D SYGS A+F++ R+ K+N+ ++G G+ AD QYL
Sbjct: 5 PVVTGTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKINNKTVMGFSGELADAQYL 64
Query: 436 KDIIQQKIIDESCVGDGLQ--LKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+++ +K I+ + P+ H +++RV Y +++++DPL+N+ ++
Sbjct: 65 HELLTRKNINNLSEKKRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIII 115
>UniRef50_UPI00006CF83A Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 289
Score = 80.6 bits (190), Expect = 2e-14
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Frame = +1
Query: 244 HSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYAD 423
H+ +PITT ++VIG+ F+ G +IA DT SYG ++R+ RV K+ D G+++D
Sbjct: 66 HTLNPITTGSSVIGIAFNGGVIIASDTSISYGGMSRYNHIQRVHKITDNCAFASSGEFSD 125
Query: 424 FQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDP--LWN 570
FQ L +I + D + PR +++++ Y+ R+KM+P LWN
Sbjct: 126 FQELSRLIDEMTNQTYLNDDKINYTPRDYGNYISQLQYHHRNKMNPLYLWN 176
>UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit,
threonine peptidase; n=1; Trichomonas vaginalis G3|Rep:
Family T1, proteasome beta subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 214
Score = 72.5 bits (170), Expect = 7e-12
Identities = 33/102 (32%), Positives = 58/102 (56%)
Frame = +1
Query: 259 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLK 438
IT + ++ K+D G ++A D +YGS+ R + ++V I++G G++ADFQ L
Sbjct: 4 ITASGAIVAAKYDGGILLASDLSITYGSMFRHNNVSHFVEVAPNIIIGASGEFADFQTLI 63
Query: 439 DIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPL 564
++I+ I+ + C +G L +H ++ R +Y RS M PL
Sbjct: 64 EVIKSVILQQQCKHNGEYLTASEVHNYIKRYMYQCRSNMKPL 105
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 72.5 bits (170), Expect = 7e-12
Identities = 37/100 (37%), Positives = 56/100 (56%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TTV+ ++ G ++ DT GSYG LA+ R+ KV D LLG G+ +D QYL
Sbjct: 15 TGTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKT 74
Query: 445 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPL 564
+ I+ + D ++ P+ H + R+LY+ RSK+ PL
Sbjct: 75 L--TILTQE---DNRRIDPKGYHKMIQRILYSARSKISPL 109
>UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 236
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +1
Query: 244 HSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYAD 423
H+ SP+ T +VI + ++ G ++ DTL SYGS+A F++ ++ +++ + G+++D
Sbjct: 13 HTTSPVVTGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYASSGEFSD 72
Query: 424 FQYLKDIIQQKIIDESCV--GDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
FQ + + + ID S + DG+ P+ +L R+ Y KR K++PL+ V+
Sbjct: 73 FQQV--VKELAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVI 125
>UniRef50_Q8I6Y3 Cluster: Proteasome subunit beta type; n=8;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 220
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
+VI +K++ G ++A DTL SYGSLA++ + PR+ + + G YADFQ + ++
Sbjct: 6 SVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMAKQVED 65
Query: 454 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDP 561
I + + +L P + +L R +Y KR +P
Sbjct: 66 NIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEP 101
>UniRef50_Q4MZR6 Cluster: 20S proteasome beta 7 subunit, putative;
n=2; Theileria|Rep: 20S proteasome beta 7 subunit,
putative - Theileria parva
Length = 229
Score = 60.1 bits (139), Expect = 4e-08
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY---- 432
T ++I +K+++G ++ DT S G +AR+ + R+ V+ L GD AD QY
Sbjct: 6 TGASIIAMKYNEGVLMMTDTKWSLGRMARYMNVLRLESVSSNTLFATSGDAADHQYLTRV 65
Query: 433 LKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
LK + +++ + L P L + +R+LY++R+K+DP+ S VV
Sbjct: 66 LKHAVHTDLLEHNNDASKALLNPEMLLNYTSRLLYHRRTKLDPVLVSAVV 115
>UniRef50_A7AVH7 Cluster: Proteasome subunit beta type 4; n=1;
Babesia bovis|Rep: Proteasome subunit beta type 4 -
Babesia bovis
Length = 226
Score = 59.7 bits (138), Expect = 5e-08
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +1
Query: 331 SYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ----QKIIDESCVGDGLQLK 498
SYG R + R+ K+ + GD AD QY+ ++Q ++++D + L
Sbjct: 25 SYGRQNRTNNVQRIEKLAKDTIFCTSGDVADHQYITQLLQATVRREMLDNNNDHASCHLG 84
Query: 499 PRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
P +LH +L RV Y +RSKM+PLWNS +V
Sbjct: 85 PEALHNYLGRVFYARRSKMNPLWNSAIV 112
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/106 (31%), Positives = 54/106 (50%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TV+ V G ++A DT+ +YGS R + R++ V L+G GD ADF+
Sbjct: 6 TGGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYT 65
Query: 445 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
++ + C G R +H +L Y+ R +MDP++N Y++
Sbjct: 66 LKSMHREARCHGTP-PPSTREIHGFLATRNYSSRLEMDPIYNGYII 110
>UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=19;
Eukaryota|Rep: Proteasome component PUP1 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 261
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 241 AHSASPITTT-TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDY 417
+H+ T+T TT++GVKF+ G VIA DT + G + ++C ++ +++ I G
Sbjct: 19 SHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTA 78
Query: 418 ADFQYLKDIIQQKI 459
AD + + +I I
Sbjct: 79 ADTEAVTQLIGSNI 92
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
TT+IG+K G V+A D S G++ + +++ + D ILL G AD Q++ I++
Sbjct: 2 TTIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILK 61
Query: 451 QKI 459
++
Sbjct: 62 TEL 64
>UniRef50_A4FNF9 Cluster: Diguanylate cyclase/phosphodiesterase with
PAS/PAC and GAF sensor; n=2; Saccharopolyspora erythraea
NRRL 2338|Rep: Diguanylate cyclase/phosphodiesterase with
PAS/PAC and GAF sensor - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 929
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 268 TTTVIGVKFDKGCVIAGDTLGS-YGSLARFRDCP-RVMKVNDLILLGCGGDYADFQYLKD 441
T +G +G A D G+ Y SLAR +D P +++KV+ + G GGD +DF +
Sbjct: 807 TRHAMGELVQRGVRFAVDDFGTGYSSLARLKDLPAQIIKVDRRFVSGVGGDASDFAVARA 866
Query: 442 IIQQ-KIIDESCVGDGLQ 492
++ + + CV +G++
Sbjct: 867 VVDMARAMGRQCVAEGVE 884
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
TV+ V ++AGDT S G RD ++ ++ D +L G YADF L+ +QQ
Sbjct: 38 TVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKFLQQ 97
Query: 454 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKR 546
++ + +Q ++ L+R LY++R
Sbjct: 98 RLQLYEFQNE-VQASTETVAHLLSRELYSRR 127
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 41.9 bits (94), Expect = 0.011
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +1
Query: 259 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLK 438
+T TT +G+ DKG V+A D G+L + ++ +++D I + G AD Q +
Sbjct: 7 LTKGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIV 66
Query: 439 DIIQ 450
D+++
Sbjct: 67 DLMR 70
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
TVIG+ + ++AGDT S R+CP++ K+ D ++G G +D + L ++Q
Sbjct: 41 TVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQ 99
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 41.1 bits (92), Expect = 0.019
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like protein;
n=1; Antonospora locustae|Rep: Proteasome beta-type
subunit-like protein - Antonospora locustae (Nosema
locustae)
Length = 190
Score = 40.7 bits (91), Expect = 0.025
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +1
Query: 235 FTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGD 414
F+AH A P T TT++G++F G + DT + G + ++C ++ ++ D I G
Sbjct: 10 FSAHLA-PKKTGTTIVGLRFAGGVALFADTRATIGDVVEDKNCFKLHQLADTIHCAGAGT 68
Query: 415 YADFQYL 435
AD ++L
Sbjct: 69 AADTEHL 75
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 40.3 bits (90), Expect = 0.032
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 259 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLK 438
+ T TT++GV + V+ DT + G + +DC ++ +++D I G AD ++
Sbjct: 38 VKTGTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVT 97
Query: 439 DIIQ 450
+I+
Sbjct: 98 SLIE 101
>UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 227
Score = 40.3 bits (90), Expect = 0.032
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYAD 423
T TT++G+K+ G ++A DT + G + ++C ++ ++ D I+ G AD
Sbjct: 5 TGTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCGAGTAAD 57
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 39.9 bits (89), Expect = 0.043
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +1
Query: 211 PSRHGVQDFTAHSASP-ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVND 387
P +++ + +P + TV + ++AGD S G RD ++ ++ D
Sbjct: 23 PQADNIKEAKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTD 82
Query: 388 LILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKR 546
+ L G YADF L + + + +G Q R++ L+R LY KR
Sbjct: 83 NVFLATSGMYADFAALSKQLSAR-LHMYKYNNGKQANMRAIASLLSRTLYYKR 134
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 39.9 bits (89), Expect = 0.043
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
TVIGV ++A DT S R CP++ K+ D ++G G +D + L ++++
Sbjct: 40 TVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLLKK 99
Query: 454 KI 459
KI
Sbjct: 100 KI 101
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 39.9 bits (89), Expect = 0.043
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
TT +G+ G V A + S G+L + ++ K+ND I+ G D Q L II+
Sbjct: 9 TTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIE 68
Query: 451 QKI 459
++
Sbjct: 69 AEV 71
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 39.9 bits (89), Expect = 0.043
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 244 HSASPITTTT-TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYA 420
H SP TV+ V + ++A DT S G RD P+ K+ D ++GC G +
Sbjct: 25 HKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHG 84
Query: 421 DFQYLKDIIQQKI 459
D L II+ ++
Sbjct: 85 DCLTLTKIIEARL 97
>UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 275
Score = 39.1 bits (87), Expect = 0.075
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 PITTT-TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
P T T TT++GV FD G V+A DT + GS+ ++C ++ + I G AD +
Sbjct: 34 PFTKTGTTIVGVIFDGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAGAGTAADLHH 93
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 39.1 bits (87), Expect = 0.075
Identities = 23/95 (24%), Positives = 45/95 (47%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+I +K+D G +I D+ S G+ R ++ ++ D I + G AD Q +
Sbjct: 9 TGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSY 68
Query: 445 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRS 549
++ + S + D + R+ ++++Y S
Sbjct: 69 LRMYLSMYSQLEDSIPQVQRAA-ALASKIIYENPS 102
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 39.1 bits (87), Expect = 0.075
Identities = 28/91 (30%), Positives = 45/91 (49%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
TV+G+ + V+AGDT G + R ++ V D IL+ G AD L D +Q
Sbjct: 34 TVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFAADGVALIDRFKQ 93
Query: 454 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKR 546
+I +G +L +S ++ ++LY KR
Sbjct: 94 SLIWYKFDNNGKKLAIKSAARYIQQLLYGKR 124
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 38.7 bits (86), Expect = 0.099
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
T +G+K + G V+A + SYG + +V K+N ++ G G Y D Q L I+
Sbjct: 7 TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAG-AGIYGDLQTLTRIMNV 65
Query: 454 KI 459
+I
Sbjct: 66 EI 67
>UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +1
Query: 232 DFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGG 411
+FT ++ PI+ TT+IGV ++ G ++ D S GS+ R ++ V+D I + G
Sbjct: 2 EFTHNAYQPISLGTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTAG 61
Query: 412 DYADFQYLKDIIQQKI 459
A + + D ++ +
Sbjct: 62 TAAHSETIGDYVKHAL 77
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 38.3 bits (85), Expect = 0.13
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
T +G++ + G V+A D SYG R+ ++ +ND I + G Y D L I++
Sbjct: 7 TALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEG 66
Query: 454 KIIDESCVGDGLQLKPRSLHCWLTRVLYN 540
++ S + G R++ +L+ +LY+
Sbjct: 67 QMRLAS-LETGKPATVRNVAKFLSSLLYS 94
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 37.9 bits (84), Expect = 0.17
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 223 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 399
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 400 GCGGDYADFQYLKDIIQQKI 459
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 37.5 bits (83), Expect = 0.23
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T T +G++ V+A + SYG + +V K+ D + L G +AD Q + I
Sbjct: 7 TGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKI 66
Query: 445 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYN 540
++ +I + V G ++ R++ L +LY+
Sbjct: 67 LRAEIEYYNIV-TGRRISVRAVARLLATILYS 97
>UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila
melanogaster|Rep: AT05866p - Drosophila melanogaster
(Fruit fly)
Length = 322
Score = 36.7 bits (81), Expect = 0.40
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 262 TTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKD 441
TT TTV+G+ FD G +I ++ + G + + C +++++ I G D + L +
Sbjct: 47 TTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVE 106
Query: 442 IIQQKI 459
+ + ++
Sbjct: 107 LTRAQL 112
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 36.3 bits (80), Expect = 0.53
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 253 SPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
+P + TT+IGV ++ G V+ D+ S G R ++ ++ D + + G AD Q
Sbjct: 7 APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQV 66
Query: 433 LKDIIQ 450
+ D ++
Sbjct: 67 VSDYVR 72
>UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;
Corynebacterineae|Rep: 20S proteasome, A and B subunits
- Mycobacterium sp. (strain KMS)
Length = 304
Score = 35.9 bits (79), Expect = 0.70
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYA 420
TT++ +KF G V+AGD + G++ RD +V +D G G A
Sbjct: 66 TTIVALKFPGGVVMAGDRRATQGNMIASRDVQKVYITDDYTATGIAGTAA 115
>UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|Rep:
Proteasome, putative - Plasmodium falciparum (isolate
3D7)
Length = 282
Score = 35.9 bits (79), Expect = 0.70
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 253 SPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
+PI+ TT+IG+ +D G ++A D+ S G+ + ++ ++N+ + + G A Q
Sbjct: 25 TPISDGTTIIGIIYDNGVMLACDSRTSSGTFISNKCSRKINRINENLYVCRSGASAHSQK 84
Query: 433 LKDIIQ 450
+ +II+
Sbjct: 85 IIEIIK 90
>UniRef50_Q6RKE3 Cluster: Polyketide synthase; n=2; Fungi/Metazoa
group|Rep: Polyketide synthase - Cochliobolus
heterostrophus (Drechslera maydis)
Length = 2528
Score = 35.9 bits (79), Expect = 0.70
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 106 TMAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASP 258
T+ + DT N P + P+P P +A+T PSRH V D ASP
Sbjct: 1726 TLEKLLDTANSAPAPRKDPAPRTDSAPPKHATTAVPSRHAVPDLLPADASP 1776
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 35.5 bits (78), Expect = 0.92
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 277 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 456
V+ + +K CV+A DT S G R R++K+++L LLG G +D L ++ +
Sbjct: 40 VLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNE 99
Query: 457 I 459
I
Sbjct: 100 I 100
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
TT +G KF+ G VIA D+ + G + +V+++N +L G AD + + ++
Sbjct: 71 TTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAADCAFWERVLA 130
Query: 451 QK 456
++
Sbjct: 131 EQ 132
>UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 271
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 259 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
+ T TT+ GV V+A DT + G + ++C ++ K++D I G AD ++
Sbjct: 37 LKTGTTICGVMGRDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAGAGVAADLEH 94
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
TVI ++ VIA DT S L R ++ K+ D +LG G AD L+ ++++
Sbjct: 17 TVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSVLER 76
Query: 454 KI 459
+I
Sbjct: 77 QI 78
>UniRef50_Q1D018 Cluster: Beta-ketoacyl synthase family protein;
n=2; Cystobacterineae|Rep: Beta-ketoacyl synthase family
protein - Myxococcus xanthus (strain DK 1622)
Length = 522
Score = 34.7 bits (76), Expect = 1.6
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 226 VQDFTAHSASPITTTTTVIGVKFDKGCVIA----GDTLGSYGSLARFRDCPRVMKVNDLI 393
++ FTA P+ +GV D +I G TL +LA P M DL
Sbjct: 353 LEHFTAKGFKPLGMEPIAVGVTADADHIITPSKEGPTLAIREALAAAGCAPEDMGSWDLH 412
Query: 394 LLGCGGDYADFQYLKDIIQQKII 462
GDY + Q L+D++ ++++
Sbjct: 413 ATATPGDYLEVQNLRDVLPEQVL 435
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +1
Query: 259 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLK 438
+ T TT++G+ F G ++ DT + G + ++C ++ + I G AD + +
Sbjct: 36 LKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVT 95
Query: 439 DIIQQKI 459
D++ ++
Sbjct: 96 DMVSSQL 102
>UniRef50_Q4UER7 Cluster: Proteasome subunit y, putative; n=4;
Piroplasmida|Rep: Proteasome subunit y, putative -
Theileria annulata
Length = 294
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
TT+IG+KF G ++ D S G + R ++ ++ I + G AD Q L II+
Sbjct: 69 TTIIGMKFMDGVILVADGRTSSGQIVANRVARKITRILPNIFMLRSGSAADSQTLSTIIR 128
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 34.3 bits (75), Expect = 2.1
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +1
Query: 295 DKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESC 474
D ++AGDT + G R P+V V D IL+ G AD L + I+Q ++
Sbjct: 43 DDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQH-VELYH 101
Query: 475 VGDGLQLKPRSLHCWLTRVLYNKR 546
+ LK +S + +LYNKR
Sbjct: 102 YQNNKPLKVQSCARAIQHMLYNKR 125
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 33.9 bits (74), Expect = 2.8
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 33.5 bits (73), Expect = 3.7
Identities = 26/103 (25%), Positives = 50/103 (48%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
TV+G+K G VIAG+ +Y ++ +V + + +G G D Q++ ++
Sbjct: 19 TVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRM 78
Query: 454 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+ + + G +++ R L L+ +LY+ K+ PL VV
Sbjct: 79 E-AENYELQLGREIRVRGLAKILSLILYS--YKLAPLMTEVVV 118
>UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;
Actinomycetales|Rep: 20S proteasome, A and B subunits -
Frankia sp. (strain CcI3)
Length = 304
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 271 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGG 411
TT++ V F G ++AGD + G + RD +V +D +G G
Sbjct: 83 TTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCVGYAG 129
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 32.7 bits (71), Expect = 6.5
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +1
Query: 238 TAHSASP-ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGD 414
T H A P TT++ VK+ G V+ D+ S G+ R ++ + + + + G
Sbjct: 38 TTHRAPPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMCRSGS 97
Query: 415 YADFQ----YLKDIIQQKIIDESCVG 480
AD Q Y+ + Q+ + S G
Sbjct: 98 AADTQNVAAYVSRLAQEHAVSVSSAG 123
>UniRef50_Q9JMS5 Cluster: Uncharacterized protein yuaO precursor; n=1;
Escherichia coli K12|Rep: Uncharacterized protein yuaO
precursor - Escherichia coli (strain K12)
Length = 1758
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 229 QDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCG 408
+D+ AH S + + G K + GDT GS G + ++ K D++L+
Sbjct: 1324 KDYVAHDGSGVQFG--IFGQKEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVN 1381
Query: 409 GDYADFQYLKDIIQ 450
GD + YL +I+
Sbjct: 1382 GDSSGSFYLNSLIK 1395
>UniRef50_Q15NF1 Cluster: Diacylglycerol kinase, catalytic region
precursor; n=2; Alteromonadales|Rep: Diacylglycerol
kinase, catalytic region precursor - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 540
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 YGSLARFRD-CPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGL 489
Y S AR D P + K++D + L C +D YL+++ + I+D + DGL
Sbjct: 78 YNSWARKNDKVPAIQKIDDDLFLACRLFPSDVAYLQELNVKAILDVTAEFDGL 130
>UniRef50_A6NWL4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 332
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 385 DLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGL 489
D +LG Y D + LKD++ ++IID S +GDGL
Sbjct: 86 DYYILGLDELYVDGK-LKDVLDREIIDVSLIGDGL 119
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 32.3 bits (70), Expect = 8.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 450
T +G+K G V+A + SYG +V ++D + + G AD Q L I++
Sbjct: 10 TAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKILK 68
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
T +G++ G V+A + SYG + +V ++ D + + G AD Q L I++
Sbjct: 7 TTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEA 66
Query: 454 KI 459
++
Sbjct: 67 EM 68
>UniRef50_Q6L1Z4 Cluster: Alanyl-tRNA synthetase; n=2;
Thermoplasmatales|Rep: Alanyl-tRNA synthetase -
Picrophilus torridus
Length = 870
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 358 DCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQ 492
D RV+ ++D+ GCGG + + KDI+ KI+ V +G+Q
Sbjct: 674 DTIRVVTIDDIDSEGCGGTH--LKNTKDILMLKIVSTETVQEGIQ 716
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,395,590
Number of Sequences: 1657284
Number of extensions: 11177660
Number of successful extensions: 32423
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 30988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32368
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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