Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3f20
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3 p... 169 8e-42
CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein. 169 8e-42
BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome, ma... 169 8e-42
S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit prot... 151 2e-36
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 41 0.003
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 41 0.003
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 41 0.003
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 41 0.003
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 41 0.003
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 41 0.003
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 39 0.011
D29012-1|BAA06098.1| 239|Homo sapiens proteasome subunit Y prot... 38 0.026
CR457065-1|CAG33346.1| 239|Homo sapiens PSMB6 protein. 38 0.026
BT009809-1|AAP88811.1| 239|Homo sapiens proteasome (prosome, ma... 38 0.026
BC000835-1|AAH00835.1| 239|Homo sapiens proteasome (prosome, ma... 38 0.026
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 38 0.026
Z14977-1|CAA78700.1| 219|Homo sapiens MHC-encoded proteasome su... 34 0.42
X87344-4|CAA60784.1| 219|Homo sapiens LMP2 protein. 34 0.42
X66401-1|CAA47024.1| 219|Homo sapiens LMP2 protein. 34 0.42
U01025-1|AAC50154.1| 209|Homo sapiens LMP-2 protein. 34 0.42
S75169-1|AAC60646.1| 209|Homo sapiens proteasome LMP2.s protein. 34 0.42
CR541656-1|CAG46457.1| 219|Homo sapiens PSMB9 protein. 34 0.42
BC065513-1|AAH65513.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.42
AL935043-7|CAI18627.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.42
AL671681-13|CAI17715.1| 219|Homo sapiens proteasome (prosome, m... 34 0.42
AL669918-9|CAI18141.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.42
X62741-1|CAA44603.1| 219|Homo sapiens RING12 protein. 33 0.56
BX088556-5|CAM26264.1| 219|Homo sapiens proteasome (prosome, ma... 33 0.56
D38048-1|BAA07238.1| 277|Homo sapiens proteasome subunit z prot... 31 2.2
CR456721-1|CAG33002.1| 277|Homo sapiens PSMB7 protein. 31 2.2
BC017116-1|AAH17116.2| 256|Homo sapiens PSMB7 protein protein. 31 2.2
BC000509-1|AAH00509.1| 277|Homo sapiens proteasome (prosome, ma... 31 2.2
AL137846-4|CAI10874.1| 210|Homo sapiens proteasome (prosome, ma... 31 2.2
AL137846-3|CAI10873.1| 277|Homo sapiens proteasome (prosome, ma... 31 2.2
AK223356-1|BAD97076.1| 277|Homo sapiens proteasome beta 7 subun... 31 2.2
AK223007-1|BAD96727.1| 277|Homo sapiens proteasome beta 7 subun... 31 2.2
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 31 3.0
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 31 3.0
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 31 3.0
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 30 5.2
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 29 9.1
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 29 9.1
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 29 9.1
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 29 9.1
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 29 9.1
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 29 9.1
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 29 9.1
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 29 9.1
>D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3
protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 169 bits (410), Expect = 8e-42
Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 112 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 288
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 289 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 468
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 469 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 157
>S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit
protein.
Length = 233
Score = 151 bits (365), Expect = 2e-36
Identities = 64/110 (58%), Positives = 86/110 (78%)
Frame = +1
Query: 253 SPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 432
+P+ T T+V+GVKF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQY
Sbjct: 17 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 76
Query: 433 LKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVV 582
LK ++ Q +IDE +GDG PR++H WLTR +Y++RSKM+PLWN+ V+
Sbjct: 77 LKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVI 126
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +1
Query: 163 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 342
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 8 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 66
Query: 343 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKI 459
RD P+ K+ D ++GC G + D L II+ ++
Sbjct: 67 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 105
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 39.1 bits (87), Expect = 0.011
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
T++ + + ++A DT S G RD P+ K+ D ++GC G + D L II+
Sbjct: 39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 98
Query: 454 KI 459
++
Sbjct: 99 RL 100
>D29012-1|BAA06098.1| 239|Homo sapiens proteasome subunit Y
protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.026
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 223 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 399
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 400 GCGGDYADFQYLKDIIQQKI 459
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>CR457065-1|CAG33346.1| 239|Homo sapiens PSMB6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.026
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 223 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 399
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 400 GCGGDYADFQYLKDIIQQKI 459
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>BT009809-1|AAP88811.1| 239|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.026
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 223 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 399
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 400 GCGGDYADFQYLKDIIQQKI 459
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>BC000835-1|AAH00835.1| 239|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.026
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 223 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 399
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 400 GCGGDYADFQYLKDIIQQKI 459
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 37.9 bits (84), Expect = 0.026
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 274 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 453
T++ + + ++A DT S G RD P+ ++ D ++GC G + D L II+
Sbjct: 39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTKIIEA 98
Query: 454 KI 459
++
Sbjct: 99 RL 100
>Z14977-1|CAA78700.1| 219|Homo sapiens MHC-encoded proteasome
subunit gene protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>X87344-4|CAA60784.1| 219|Homo sapiens LMP2 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>X66401-1|CAA47024.1| 219|Homo sapiens LMP2 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>U01025-1|AAC50154.1| 209|Homo sapiens LMP-2 protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 4 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 63
Query: 430 YLKDI 444
+ D+
Sbjct: 64 AVADM 68
>S75169-1|AAC60646.1| 209|Homo sapiens proteasome LMP2.s protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 4 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 63
Query: 430 YLKDI 444
+ D+
Sbjct: 64 AVADM 68
>CR541656-1|CAG46457.1| 219|Homo sapiens PSMB9 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>BC065513-1|AAH65513.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>AL935043-7|CAI18627.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>AL671681-13|CAI17715.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>AL669918-9|CAI18141.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.42
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>X62741-1|CAA44603.1| 219|Homo sapiens RING12 protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.56
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>BX088556-5|CAM26264.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit beta typea 1 protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.56
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 250 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 429
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCALSGSAADAQ 73
Query: 430 YLKDI 444
+ D+
Sbjct: 74 AVADM 78
>D38048-1|BAA07238.1| 277|Homo sapiens proteasome subunit z
protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>CR456721-1|CAG33002.1| 277|Homo sapiens PSMB7 protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>BC017116-1|AAH17116.2| 256|Homo sapiens PSMB7 protein protein.
Length = 256
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 21 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 80
Query: 445 IQQKI 459
I +
Sbjct: 81 ISSNL 85
>BC000509-1|AAH00509.1| 277|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>AL137846-4|CAI10874.1| 210|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 210
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>AL137846-3|CAI10873.1| 277|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>AK223356-1|BAD97076.1| 277|Homo sapiens proteasome beta 7 subunit
proprotein variant protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>AK223007-1|BAD96727.1| 277|Homo sapiens proteasome beta 7 subunit
proprotein variant protein.
Length = 277
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 265 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 444
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 445 IQQKI 459
I +
Sbjct: 102 ISSNL 106
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 288
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 181 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 236
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 288
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 486
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 288
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 210 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 265
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 30.3 bits (65), Expect = 5.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 463 DESCVGDGLQLKPRSLHCW 519
+ S G+GL+L P S+HCW
Sbjct: 264 NSSEAGEGLELPPNSIHCW 282
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 181 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 235
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 485
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 485
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 485
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 485
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 142 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 196
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 256 PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYL 435
P T +IG++ ++A D + + + D ++ K+++ ILL C G+ D
Sbjct: 29 PSATMEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQF 88
Query: 436 KDIIQQKI 459
+ IQ+ +
Sbjct: 89 AEYIQKNV 96
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 130 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIG 285
M P P WQ G P F P P RH A ++ + TTT +G
Sbjct: 129 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVG 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,040,673
Number of Sequences: 237096
Number of extensions: 1789370
Number of successful extensions: 4096
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4082
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -