Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f19
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    33   6e-04
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    33   6e-04
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   6.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 33.5 bits (73), Expect = 6e-04
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 9   NFFRNKLKLMSFLRKRCNVNPARGPFXFRAP--SKILWKTVRGMI 137
           N+ +  ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 33.5 bits (73), Expect = 6e-04
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 9   NFFRNKLKLMSFLRKRCNVNPARGPFXFRAP--SKILWKTVRGMI 137
           N+ +  ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 193 PSYVRSLLRXFLPRSVLCGIIPLTVFH 113
           PS+  S +R FL  +    ++P  ++H
Sbjct: 34  PSFKLSKIRSFLNITASAVLLPFAIYH 60


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 213 NRRRVVSACCSTCLLSE 263
           N   + S C   CLLSE
Sbjct: 187 NSNLLKSVCADLCLLSE 203


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = +3

Query: 90  FRAPSKILWKTVRGMIPHKTERGKNXLRRLRT 185
           F+    I W+    ++  +TE  K  + R+++
Sbjct: 529 FQCLKSIAWRAFLAVLKRRTEIYKGLIDRIKS 560


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 244 LRVFCLKPGRNY 279
           L VF + PGR Y
Sbjct: 333 LEVFTITPGRRY 344


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 244 LRVFCLKPGRNY 279
           L VF + PGR Y
Sbjct: 333 LEVFTITPGRRY 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,489
Number of Sequences: 336
Number of extensions: 1656
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)