Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f19
         (350 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   3.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   4.4  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       22   7.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   7.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   7.6  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 349 CLQAYEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALTTRRRL 212
           C +A +  H    + HG VCL    +G +++  ++    + TRR +
Sbjct: 40  CGKALDDFHTSYAKAHGIVCLLVCIFGSIANTLNI---VVLTRREM 82


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 262  SDRRHVEQQALTTRRRLSKGGGHP 191
            ++RR+  ++A T RRR  +  G P
Sbjct: 1108 NERRNANRRAATARRREERRAGLP 1131


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 160 LPR---SVLCGIIPLTVFHRILDGA 95
           LPR   +V+C I+P T+   + DGA
Sbjct: 119 LPRQDNTVICPILPQTLLATLHDGA 143


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 271 GQVSDRRHVEQQALTTRRRLSKGGGHPSYVRS 176
           G  S R   E +A   RR+   GGGH S+ RS
Sbjct: 504 GVQSPRHGHESRANNFRRKRFAGGGH-SHHRS 534


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 261 QTEDT*SSRHLQHVDGYQREE 199
           Q  D  SS++L H+D   RE+
Sbjct: 390 QKADATSSKYLIHLDSVNREQ 410


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,678
Number of Sequences: 2352
Number of extensions: 6943
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)