Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f18
         (181 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            20   9.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      20   9.1  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    20   9.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 103  NCQTQSVYCTRGN*NKCXR 47
            N Q  +++C+ G+ N C R
Sbjct: 1618 NGQEFNLFCSTGSSNSCNR 1636


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 166 QKLEIQCAVFALFHYSRLPLANCQTQSVY 80
           Q+  + CA  A+F ++ +PL    T+  Y
Sbjct: 355 QRALLSCAFGAVFIFNYIPLQEGTTRLRY 383


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -1

Query: 154 IQCAVFALFHYSRLPLANC 98
           + C      HY   PLA C
Sbjct: 143 VMCMQGRFHHYEGYPLAKC 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,283
Number of Sequences: 2352
Number of extensions: 2502
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)