Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f18
         (181 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011444-1|AAR99102.1|  967|Drosophila melanogaster RE49535p pro...    28   2.0  
AE014297-2827|AAF55788.3|  919|Drosophila melanogaster CG15923-P...    28   2.0  

>BT011444-1|AAR99102.1|  967|Drosophila melanogaster RE49535p
           protein.
          Length = 967

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 162 NWRSNAQFLLCFIIHDCRWQIAKHKAFIAXVEIKTSVXEFQRQQ 31
           N R NA+FL  F+     WQ   H+     V I+T   E QR Q
Sbjct: 371 NQRHNAEFLTVFLNFSSNWQYLLHQ---LPVLIETLTPENQRPQ 411


>AE014297-2827|AAF55788.3|  919|Drosophila melanogaster CG15923-PA
           protein.
          Length = 919

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 162 NWRSNAQFLLCFIIHDCRWQIAKHKAFIAXVEIKTSVXEFQRQQ 31
           N R NA+FL  F+     WQ   H+     V I+T   E QR Q
Sbjct: 382 NQRHNAEFLTVFLNFSSNWQYLLHQ---LPVLIETLTPENQRPQ 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,361,457
Number of Sequences: 53049
Number of extensions: 104619
Number of successful extensions: 261
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)