Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f05
         (360 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.41 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   0.72 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   6.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   6.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   6.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   6.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    20   6.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   8.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.41
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 206 CSNRR*D*AGYSPPQCWQRRCYVXAXGFP 120
           C ++  D A Y PP+   + C +   GFP
Sbjct: 432 CQDKLGDYACYCPPKHTGKNCEIYDRGFP 460


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 0.72
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 185 NPTVDWNNATDRLQSKRSKR 244
           NP V  ++ T+  +SKRSKR
Sbjct: 63  NPAVQGSSLTEGKRSKRSKR 82


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 108 WPVIAVNVVPSRVTHSTGCLRLS 40
           WP   VN VP  +      +RLS
Sbjct: 282 WPARPVNQVPRDLNREVDQIRLS 304


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -1

Query: 204 FQSTVGLG---RIFSTTMLAASMLRXCFXLSTYVF 109
           +QST  L    R  +  M+  ++L  CF +  YV+
Sbjct: 134 YQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVY 168


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 202 PIDGRIRPDILH 167
           PI  +IRP ILH
Sbjct: 96  PIHHQIRPPILH 107


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 202 PIDGRIRPDILH 167
           PI  +IRP ILH
Sbjct: 96  PIHHQIRPPILH 107


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 185 NPTVDWNNATDRLQSKRSKRS 247
           NP  + NN + R Q + S+ S
Sbjct: 392 NPNDNRNNTSSRAQGETSRNS 412


>EF468474-1|ABR25244.1|  516|Tribolium castaneum
          methoprene-tolerant protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 6/17 (35%), Positives = 8/17 (47%)
 Frame = -2

Query: 83 CRRASRTAPDVCACPRG 33
          C     +AP+ C  P G
Sbjct: 6  CETEEDSAPEACVSPEG 22


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 202 PIDGRIRPDILH 167
           PI  +IRP ILH
Sbjct: 96  PIHHQIRPPILH 107


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 202 PIDGRIRPDILH 167
           PI  +IRP ILH
Sbjct: 96  PIHHQIRPPILH 107


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   SDRFVGSRGSIPRGQAQT 54
           + R   SRG IPR + +T
Sbjct: 232 NSRRASSRGLIPRAKVKT 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,275
Number of Sequences: 336
Number of extensions: 1219
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)