Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f05
         (360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.1  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     22   6.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    22   8.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 167  VENIRPNPTVDWNNATDRLQSKRSKRSISFDSLEEAQQFENRIKYLLK 310
            +E+ R  P ++ N          ++ S    SLE+ QQF+   +  LK
Sbjct: 960  LEDFRATPFIECNGGKGHCHYYETQTSFWLVSLEDHQQFQRPEQQTLK 1007


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 156 PTLWWRISGLILPSIGT 206
           P LWW+   ++ PS+ T
Sbjct: 539 PLLWWKEHQVLYPSLYT 555


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 207 LFQSTVGLGRIFSTTMLAASMLRXCFXLSTYVFWPVIAVNVVPSRVTHSTGCLRLSAG 34
           +F + + L  IF T++   S+      LS YV+  +    +VP      T CL +S G
Sbjct: 565 IFSALITLLFIFETSIKLVSVYVRHPLLSEYVYKNITVAPLVP------TPCLEVSNG 616


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,325
Number of Sequences: 2352
Number of extensions: 4816
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)