Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3f04
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in HE6... 103 3e-21
UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12; ... 90 4e-17
UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein precur... 75 2e-12
UniRef50_P41674 Cluster: Uncharacterized 6.7 kDa protein in HE65... 60 4e-08
UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep: P... 44 0.003
UniRef50_Q8JMA7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.071
UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep: ... 39 0.12
UniRef50_Q639S8 Cluster: Transcriptional regulator, MarR family;... 34 2.7
UniRef50_UPI000150A866 Cluster: Tubulin-tyrosine ligase family p... 34 3.5
UniRef50_Q4HLQ6 Cluster: Membrane protein, putative; n=1; Campyl... 34 3.5
UniRef50_A7FQ91 Cluster: NlpC/P60 family protein; n=4; Clostridi... 34 3.5
UniRef50_A1TXX1 Cluster: Histidine kinase internal region; n=3; ... 34 3.5
UniRef50_Q22KJ7 Cluster: Cation channel family protein; n=2; Tet... 33 6.2
UniRef50_A1EWZ5 Cluster: Putative uncharacterized protein; n=2; ... 33 8.2
>UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in
HE65-PK2 intergenic region precursor; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 59.7 kDa
protein in HE65-PK2 intergenic region precursor -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 530
Score = 103 bits (248), Expect = 3e-21
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNTIRTITTGAMTQGQQIDALTQ 182
SRE THIK+WS ASRYPRGDAPA E+NTIR +TTG MTQGQQIDALTQ
Sbjct: 461 SREGTHIKVWSRASRYPRGDAPAALRLRGFFLNNDRERNTIRAVTTGDMTQGQQIDALTQ 520
Query: 183 ILQTYPNYSL 212
IL+TYPNYS+
Sbjct: 521 ILETYPNYSV 530
>UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 82
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +1
Query: 223 MSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECL 402
MS+ VVEAC L F KLGYLFRA+ CLDIAL NLK LR++ I +VA ML KK +C
Sbjct: 1 MSMAQVVEACKLHAVFAKLGYLFRARVCLDIALANLKQLRQRVAIPQVANMLAKKEAQCC 60
Query: 403 QLKQKIDKKIAQRILIKIYTI 465
L++K++ +I R LIK+Y I
Sbjct: 61 LLREKLNTQIDNRSLIKLYKI 81
>UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein
precursor; n=7; Nucleopolyhedrovirus|Rep:
Uncharacterized 59.0 kDa protein precursor - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 529
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNTIRTITTGAMTQGQQIDALTQ 182
SR+ IK+WS A RYPRG APA E+NT+R + TG M G Q DALTQ
Sbjct: 460 SRDGAAIKVWSRAERYPRGAAPAALRLRGFFFNNDRERNTVRVVNTGDMASGAQTDALTQ 519
Query: 183 ILQTYPNYSL 212
+L T+ NYS+
Sbjct: 520 VLDTFSNYSV 529
>UniRef50_P41674 Cluster: Uncharacterized 6.7 kDa protein in
HE65-PK2 intergenic region; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 6.7 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 58
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 574 MMSSSQIIVCNKINIFVYRYNLLQINFTLN 663
MMSSSQIIVCNKINIFV +YNLLQINFTLN
Sbjct: 1 MMSSSQIIVCNKINIFVCKYNLLQINFTLN 30
>UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep:
PIF-1 - Clanis bilineata nucleopolyhedrosis virus
Length = 538
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXE-QNTIRTITTGAMTQGQQIDALT 179
SR+ I+IWSS +RYPRG P V + + + TITTG + +D L
Sbjct: 468 SRQGWAIRIWSSPTRYPRGQFPMVFNFDIKFVYEMPDIRFSFMTITTG-VNVTDDVDNLV 526
Query: 180 QILQTYPNYSL 212
++ TY NY++
Sbjct: 527 VLMTTYKNYTV 537
>UniRef50_Q8JMA7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 81
Score = 39.5 bits (88), Expect = 0.071
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +1
Query: 235 NVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQ 414
++ EA +LA F +L + +A C ++A L ++++ +V +M + KT EC +Q
Sbjct: 3 DITEALELAAQFEQLHFYDKAIECNNLATLFLNRIKQRKLNGDVLIMCDLKTLECATNRQ 62
Query: 415 KIDKKIAQRILIKIYTI 465
K++K+ +L+K Y +
Sbjct: 63 KLNKR-KDNLLLKKYIL 78
>UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep:
ORF114 - Helicoverpa zea SNPV
Length = 528
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNT---IRTITTGAMTQGQQIDA 173
SRE+ HI+ W + +P G P+V N+ + I+ ++ Q D
Sbjct: 454 SRENNHIRSWHPSRIFPDGRYPSVFRIALNQMYNVRNTNSTCELFVISGHSIVLRDQFDN 513
Query: 174 LTQILQTYPNYS 209
L IL TYPNYS
Sbjct: 514 LRSILGTYPNYS 525
>UniRef50_Q639S8 Cluster: Transcriptional regulator, MarR family;
n=2; Bacillus cereus|Rep: Transcriptional regulator,
MarR family - Bacillus cereus (strain ZK / E33L)
Length = 159
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 292 RAKTCLDIALDNLKLLRRKTNIKE--VAVMLNKKTTECLQLKQKIDKKIAQRI 444
R T LDI D LK ++R NI+ ++V+ + +TE LQ++ ++ K++A +
Sbjct: 90 RRITLLDITEDGLKFIKRNNNIRTSFMSVLFDGFSTEELQVQTEVFKRLAHNL 142
>UniRef50_UPI000150A866 Cluster: Tubulin-tyrosine ligase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Tubulin-tyrosine ligase family protein - Tetrahymena
thermophila SB210
Length = 728
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -1
Query: 555 TYNSAGKTSLKYDVIYFCTQNIELVMISSFDSVNFY*NTLCNFFIYFLFQLQTF 394
TYNS K +L++D+ ++ E+V S ++NFY N L N +++ + Q+F
Sbjct: 5 TYNSPQKQNLRHDMSLPQQKHQEVVYNESKTNINFYQNQLANGYMFQPNRYQSF 58
>UniRef50_Q4HLQ6 Cluster: Membrane protein, putative; n=1;
Campylobacter lari RM2100|Rep: Membrane protein,
putative - Campylobacter lari RM2100
Length = 521
Score = 33.9 bits (74), Expect = 3.5
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = -2
Query: 614 FILLHTIICDDDIISQTCFTRTILLVKQV*NMMSFIFAHKILNSL*FHHLIV*IFIKIRC 435
+I+LH I D+ +T+ L + ++S I A K+ + FH+ + +F I
Sbjct: 82 YIILHFIFKQDEDYL-LFYTQNTLYISLALTLISLICARKLYDFNNFHYFLAALFFSISF 140
Query: 434 AIFLSIFCFNCKHSVVFLFSMTATS 360
+ L +F S FLF +++++
Sbjct: 141 WLILGLFILIFYTSFCFLFDISSSN 165
>UniRef50_A7FQ91 Cluster: NlpC/P60 family protein; n=4; Clostridium
botulinum|Rep: NlpC/P60 family protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 367
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 331 KLLRRKTNIKEVAVMLNKKTTECLQLKQKIDKKIA 435
+L +K IKE V L+KK+TE +QLK + +KK++
Sbjct: 139 ELKTKKEEIKEKKVALDKKSTEIVQLKAENEKKLS 173
>UniRef50_A1TXX1 Cluster: Histidine kinase internal region; n=3;
Marinobacter|Rep: Histidine kinase internal region -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 372
Score = 33.9 bits (74), Expect = 3.5
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -1
Query: 222 VVIIKSSWGKFEVFGLMRLFVALGSW-RL**SFLLCFVRD--GRPEKSRAILTLQARLRV 52
+V ++SW + FGL+ LFV W L + L+C +R R SRA +T+ A + +
Sbjct: 56 IVQAQNSWIDWNYFGLLSLFV---QWTTLTSAALICLLRPRLARMSNSRATMTIAAIVLL 112
Query: 51 DIVTRYSKFLYAYLH 7
D++ +S F + LH
Sbjct: 113 DVLA-FSLFADSVLH 126
>UniRef50_Q22KJ7 Cluster: Cation channel family protein; n=2;
Tetrahymena thermophila SB210|Rep: Cation channel family
protein - Tetrahymena thermophila SB210
Length = 2497
Score = 33.1 bits (72), Expect = 6.2
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 184 YFKLTPTTLYNNNMSILNVVEAC-DLAHTFLKLGYLFRAKTCLDIALD-NLKLLRRKTNI 357
Y ++P T+ +SI+N++ AC A++ +G +F LD + N+K++ R
Sbjct: 1620 YGDISPHTIAEKILSIINMMIACGQFAYSVNSIGNIFEQFFRLDNEIQANMKIINRYMTN 1679
Query: 358 KEVAVMLNKKTTECLQLKQKIDK 426
K ++ L + E L+ K +K
Sbjct: 1680 KTISKNLQYQVREYLEYYWKQEK 1702
>UniRef50_A1EWZ5 Cluster: Putative uncharacterized protein; n=2;
Coxiella burnetii|Rep: Putative uncharacterized protein
- Coxiella burnetii 'MSU Goat Q177'
Length = 390
Score = 32.7 bits (71), Expect = 8.2
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 652 NLFVINYIYTQICLFYYILLFVMMTSYL----KLVLHVQF-CW*NKFKI*CHLFLHTKY* 488
+LFV N IYT + L+F + SYL + LH+ F N C L ++ Y
Sbjct: 236 SLFVWNKIYTYCIIGINSLIFFIFVSYLLSDRAMYLHISFLVTLNAIMFFCALLIYKLYE 295
Query: 487 TRYDFII**CKFLLKYVVQFFYLFFVS 407
TR + + F L Y FYLF +S
Sbjct: 296 TRLSYGL---YFNLFYNKAQFYLFDLS 319
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,618,509
Number of Sequences: 1657284
Number of extensions: 11522458
Number of successful extensions: 28279
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28222
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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