Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f04
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.97 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 8/43 (18%), Positives = 22/43 (51%)
 Frame = -3

Query: 619 ICLFYYILLFVMMTSYLKLVLHVQFCW*NKFKI*CHLFLHTKY 491
           +C++Y+   F++ T +L L++ + + +       C   + T +
Sbjct: 236 LCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/32 (25%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 631 IYTQICLFYYILLFVMMTSYLKLVLHVQ--FC 542
           ++  +C++Y+   F++ T +L  +L +   FC
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFC 171



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -3

Query: 619 ICLFYYILLFVMMTSYLKLVLHVQF 545
           +C++Y+   F++ T +L  +L + +
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 649 LFVINYIYTQICLFYYILLFVMMTSYLKLVLHVQFC 542
           L  + Y Y    +F   LLF++   Y  + L    C
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLC 145


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 607 YYILLFVMMTSYLKLVLHVQFCW*NKFK 524
           YY+LLFV+   Y+  + +  + W  +++
Sbjct: 100 YYLLLFVINVLYVLTLCYAVYYWRQQYE 127


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 579 HHISNLFYTYNSAGKTSLKYDVIYF 505
           H + ++F+     G  +LKY   YF
Sbjct: 374 HSVRSVFFLSEIFGLVNLKYRETYF 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,143
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)