Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f04
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    27   0.70 
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    27   0.70 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    27   0.70 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.5  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -1

Query: 516 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 385
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 356 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -1

Query: 516 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 385
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 209 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 256


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -1

Query: 516 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 385
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 356 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 493 ILCAKINDIIF*TCFTSRIVRVKQV*DMMSSSQII 597
           I  A+IND++F  C+ S    V +  ++M    ++
Sbjct: 75  IAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVL 109


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 167 YLLPLGHGACSNRSYCVLFATVVQKKVA 84
           Y  P+ HGA +NR  C      VQ+K A
Sbjct: 804 YAAPVWHGALTNRE-CRSLLKRVQRKAA 830


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,596
Number of Sequences: 2352
Number of extensions: 12566
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)