Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3f02
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.46 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   5.7  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   5.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.9  
AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive ...    23   9.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.9  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 656 QRERTVLMWSTRWRWSARQTAASACTRW 739
           +R+RT+  W T W   A    AS   RW
Sbjct: 881 ERQRTIEEWQTTWDADAAADNASRYVRW 908


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 656  QRERTVLMWSTRWRWSARQTAASACTRW 739
            +R+RT+ MW ++W     +   S  TRW
Sbjct: 936  ERQRTITMWQSQW---DAEADTSRYTRW 960


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 656 QRERTVLMWSTRWRWSARQTAASACTRW 739
           +RE T+  W   W   A    AS   RW
Sbjct: 885 ERETTIAEWQATWDSDAAGHQASGYVRW 912


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 80  YIYLSIITKHCIYKIIVF 133
           YI+L I T  CI K+I +
Sbjct: 153 YIFLVIFTAECIMKLIAY 170


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 656  QRERTVLMWSTRWRWSARQTAASACTRW 739
            +R+R++  W   W   A    AS   RW
Sbjct: 941  ERQRSMEEWQATWGADAANERASRYVRW 968


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 614 QNFRVLSQEVVMRHV*LGALIQWQVFTGASCAATCIVWLAAK 489
           Q  +   +E +  +  + A+  WQ+F G   A  C+   AAK
Sbjct: 320 QELKAALKEELQVNAGVTAVSMWQLFDGMKRARLCLPTKAAK 361


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 427 RQHLGPVHP*AVQP 386
           +QHL PVHP A  P
Sbjct: 181 QQHLQPVHPLAFHP 194


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 491 KSQHFTLLSVEAIKTFVPSSCQATSRT 411
           +S+H+    +  +  F PSS Q++S T
Sbjct: 649 RSKHYISAEMRTVLIFAPSSNQSSSST 675


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -2

Query: 384 RHCFPRSFHFPTSHLAVPAASDQEGVQSDGGRRE-LEGR-HGVIGRRGNLHVLVGVV 220
           R C   S + PTS      +   E   S GG+RE L+ +  G + +       VGVV
Sbjct: 215 RDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSEFSFTVGVV 271


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 523 APLPASFGWLLSPNTSHFCLLKP*KPSS 440
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 523 APLPASFGWLLSPNTSHFCLLKP*KPSS 440
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 291 RRELEGRHGVIGRRGNLHVL 232
           +R L+GR  V GR+G  HV+
Sbjct: 74  QRTLDGRLQVAGRKGFPHVI 93


>AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR5 protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 595 DKTLKFWDTRTAVPSMTLNLTERAYCADVEYPMAVVGTADRGICMYT 735
           D  LK++   T   +  L  T+ +YC D     A  GT   G    T
Sbjct: 25  DCRLKYYSNLTLTEACVLPDTDISYCGDEPTACAESGTGLYGTVYMT 71


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 656 QRERTVLMWSTRWRWSARQTAASACTRW 739
           +R  T+ +W   W  +A    AS   RW
Sbjct: 872 ERAVTLEVWQREWDANASNPGASRYARW 899


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,103
Number of Sequences: 2352
Number of extensions: 19550
Number of successful extensions: 54
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)