Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3e24
(663 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in PP3... 383 e-105
UniRef50_O02181 Cluster: Putative uncharacterized protein; n=1; ... 93 4e-18
UniRef50_P24080 Cluster: Uncharacterized 26.0 kDa protein in PP3... 84 3e-15
UniRef50_UPI0001597083 Cluster: UPI0001597083 related cluster; n... 74 3e-12
UniRef50_Q6VTL2 Cluster: Putative uncharacterized protein; n=2; ... 71 3e-11
UniRef50_Q91GD8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q4N0B4 Cluster: Putative uncharacterized protein; n=2; ... 38 0.28
UniRef50_Q54UV2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.66
UniRef50_Q3CJM0 Cluster: SNF2-related:Helicase, C-terminal:Type ... 36 1.1
UniRef50_Q4KSV7 Cluster: ORF-123 peptide; n=2; Nucleopolyhedrovi... 35 1.5
UniRef50_Q2NFA5 Cluster: Member of asn/thr-rich large protein fa... 35 2.0
UniRef50_Q181Z3 Cluster: Putative multidrug efflux pump, outer m... 34 3.5
UniRef50_A0Q7S4 Cluster: Glutamine amidotransferase/asparagine s... 34 3.5
UniRef50_Q7T6X5 Cluster: DNA-directed RNA polymerase subunit 1; ... 34 3.5
UniRef50_Q1LWB8 Cluster: Novel protein; n=4; Danio rerio|Rep: No... 33 4.6
UniRef50_Q8GCP3 Cluster: ICEF-IA ORF3; n=3; Mycoplasma fermentan... 33 4.6
UniRef50_Q3LBK3 Cluster: AvgC homologue; n=1; Candidatus Phytopl... 33 6.1
UniRef50_A3HUD3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_UPI000049A4FB Cluster: hypothetical protein 25.t00017; ... 33 8.1
UniRef50_A6EPR1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in
PP34-EXO intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa
protein in PP34-EXO intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 219
Score = 383 bits (943), Expect = e-105
Identities = 191/218 (87%), Positives = 193/218 (88%)
Frame = +1
Query: 10 MSDKTPTKKSGGHAMTLRERGVXXPPKKSEKLQQYKKAIAAEQTLRTTAXVSSLQNHGES 189
MSDKTPTKK G HAMTLRERGV PPKKSEKLQQYKKAIAAEQTLRTTA VSSLQN GES
Sbjct: 1 MSDKTPTKKGGSHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNPGES 60
Query: 190 AVFQXXXXXXXXXXXXXXXQKRLYPILNTPLDNFIVAFVNPTYPMAYFVNTDYKLKLECA 369
AVFQ QKRLYPIL+TPLDNFIVAFVNPTYPMAYFVNTDYKLKLECA
Sbjct: 61 AVFQELERLENAVVVLENEQKRLYPILDTPLDNFIVAFVNPTYPMAYFVNTDYKLKLECA 120
Query: 370 RITSDLLYKNKNEVAINRPKISSFKLQLNDVILDTIETIEYDLQNKVLTITAPVQDQELR 549
RI SDLLYKNKNEVAINRPKISSFKLQLN+VILDTIETIEYDLQNKVLTITAPVQDQELR
Sbjct: 121 RIRSDLLYKNKNEVAINRPKISSFKLQLNNVILDTIETIEYDLQNKVLTITAPVQDQELR 180
Query: 550 KSIIYFNILNSSDSWEVPKYMKNLFDEMQLEPPAILPL 663
KSIIYFNILN SDSWEVPKYMK LFDEMQLEPP ILPL
Sbjct: 181 KSIIYFNILN-SDSWEVPKYMKKLFDEMQLEPPVILPL 217
>UniRef50_O02181 Cluster: Putative uncharacterized protein; n=1;
Choristoneura fumiferana MNPV|Rep: Putative
uncharacterized protein - Choristoneura fumiferana
nuclear polyhedrosis virus (CfMNPV)
Length = 226
Score = 93.5 bits (222), Expect = 4e-18
Identities = 54/132 (40%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Frame = +1
Query: 289 FIVAFVNPTYPMAY--FVNTDYKLKLECARITSDLLYKNKNEVAINRPKISSFKLQLNDV 462
F+VAF +PTYPM Y NT+Y LK+ C +I +DLL+K+KN+ +N + S+F +QLND
Sbjct: 94 FVVAFAHPTYPMEYNKISNTNY-LKIYCMKINTDLLFKDKNQQMLNVLRASAFCVQLNDQ 152
Query: 463 ILDTIETIEYDLQNKVLTI----TAP--VQDQELRKSIIYFNILNSSDSWEVPKYMKNLF 624
+ T+ ++ YD Q K L + T P ++ L+K +IYFN L S+ W VP + + F
Sbjct: 153 LPLTVASVMYDKQIKQLVLSVYFTQPQIIEWLPLKKCVIYFNTL-STVEWSVPSDLLSAF 211
Query: 625 DEMQLEPPAILP 660
+ L PP P
Sbjct: 212 VNLPLTPPTYAP 223
>UniRef50_P24080 Cluster: Uncharacterized 26.0 kDa protein in
PP34-EXO intergenic region; n=2;
Nucleopolyhedrovirus|Rep: Uncharacterized 26.0 kDa
protein in PP34-EXO intergenic region - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 228
Score = 84.2 bits (199), Expect = 3e-15
Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Frame = +1
Query: 289 FIVAFVNPTYPMAYF-VNTDYKLKLECARITSDLLYKNKNEVAINR-PKISSFKLQLNDV 462
F+VAF +PTY + + + T +L++ C+ I DLL+K+KN+ N P +SF++Q+ND
Sbjct: 93 FVVAFAHPTYTIQFNKIPTVDQLRVYCSNINKDLLFKDKNQQMRNALPNAASFRVQINDE 152
Query: 463 ILDTIETIEYDLQNKVLTIT---APVQDQEL---RKSIIYFNIL-NSSDSWEVPKYMKNL 621
L ++T+ YD ++ L +T P Q EL +K ++Y NIL N+S W VP +
Sbjct: 153 PLFKVQTVVYDKESAQLVLTIRFLPRQTMELLPMKKCVVYLNILSNASVDWAVPADLLRA 212
Query: 622 FDEMQLEPPAILP 660
F ++ L PP P
Sbjct: 213 FAKLALAPPIPAP 225
>UniRef50_UPI0001597083 Cluster: UPI0001597083 related cluster; n=1;
Antheraea pernyi nucleopolyhedrovirus|Rep: UPI0001597083
UniRef100 entry - Antheraea pernyi nucleopolyhedrovirus
Length = 224
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Frame = +1
Query: 283 DNFIVAFVNPTYPMAYFVNTDYKL-KLECARITSDLLYKNK-NEVAINRPKISSFKLQLN 456
+ F+ F +PTY + Y + K+ C+ I L+KNK NE+ P +++F++Q+N
Sbjct: 91 NTFVAVFAHPTYTVEYSKLPHIDMVKIMCSNINPKFLFKNKDNELQNLLPNVTAFRVQIN 150
Query: 457 DVILDTIETIEY-DLQNKVL---TITAPVQDQELRKSIIYFNILNSSDSWEVPKYMKNLF 624
D ++++ + D + K+L T + + K +IY NIL + D W VP+ + N+F
Sbjct: 151 DEAPAAVKSVSFEDKKLKILMKFTTDEIITLLPMTKCVIYLNILTNKD-WVVPQELLNMF 209
Query: 625 DEMQLEPPAILP 660
++QL+PP +P
Sbjct: 210 AQLQLQPPNFVP 221
>UniRef50_Q6VTL2 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Choristoneura fumiferana defective
polyhedrosis virus (Cfdef)
Length = 219
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/127 (31%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Frame = +1
Query: 283 DNFIVAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVAIN-RPKISSFKLQLND 459
+ F+VAF +PTYPM Y N + + C++I LL+ +KN+ +N P ++FK+Q+ND
Sbjct: 87 NTFVVAFAHPTYPMDYIRNAT-SITINCSKINRKLLFFDKNKKMMNVLPDRTAFKVQIND 145
Query: 460 VILDTIETIEYD--LQNKVLTITAPVQDQ-ELRKSIIYFNILNSSD-SWEVPKYMKNLFD 627
+++ +D L+ ++ ++ +++ ++K +IY NIL + W VP+ + N F
Sbjct: 146 NTPMNVQSAMFDEKLELEIDFLSISIKELIPIQKCVIYLNILLQRNLQWVVPQELINTFA 205
Query: 628 EMQLEPP 648
++QL P
Sbjct: 206 KLQLAAP 212
>UniRef50_Q91GD8 Cluster: Putative uncharacterized protein; n=1;
Epiphyas postvittana NPV|Rep: Putative uncharacterized
protein - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 220
Score = 60.5 bits (140), Expect = 4e-08
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Frame = +1
Query: 283 DNFIVAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVAIN-RPKISSFKLQLND 459
+ F+V F +PTY + Y + ++CA I LL++++N+ +N P ++F++Q+N+
Sbjct: 89 NTFVVVFAHPTYNIEYNSVGKNGVIIKCANINKKLLFEDENKKLLNVLPTSTAFRVQINN 148
Query: 460 VILDTIETIEYDLQNKVLTITAPVQDQELR------KSIIYFNILNSSDS-WEVPKYMKN 618
+E + Y+ NK L I + Q L K +IYFNIL ++ + W VP + N
Sbjct: 149 ENPMHVERVTYN-DNK-LEIQLKMSTQLLNKLLPMLKCVIYFNILTTNQTPWNVPDELFN 206
Query: 619 LFDEMQLEPP 648
F ++L P
Sbjct: 207 TFVNLKLRTP 216
>UniRef50_Q4N0B4 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1056
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 NTPLDNFIVAFVNPTYPMAYFVNTDY-KLKLECARITSDLLYKNKNEVAINRPKISSFKL 447
N L V +NP YP+ F+ DY KLKL C+ IT +Y + N+ A+ ++ + K
Sbjct: 841 NPKLKILTVTLLNPFYPVHDFIQNDYPKLKLYCSHIT---IYSDINDKALKIAELITGKK 897
Query: 448 QLNDVILDTIETIE 489
+L + + + T+E
Sbjct: 898 RLGRCV-NELYTLE 910
>UniRef50_Q54UV2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1427
Score = 36.3 bits (80), Expect = 0.66
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = +1
Query: 250 KRLYPILN--TPLDNFIVAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVAINR 423
KRLY +L T L F A +N T A + T + K + T DLL + + +
Sbjct: 22 KRLYAVLTAVTDLIRFNKAPINATSYFAIILKTITENKHK-ENQTPDLL--KLFSLILPQ 78
Query: 424 PKISSFKLQLNDVILDTIETIE-YDLQNKVLTITAPVQDQELRKS----IIYFNILNSSD 588
I K Q ++IL I +E Y Q L T +Q L KS + Y +L S+
Sbjct: 79 VSIPIIKNQSVNIILQMINILEKYVTQETTLNSTMSNDEQSLVKSGTYILGYVLVLAESN 138
Query: 589 SWEVPKYMK 615
W P+Y++
Sbjct: 139 QWSTPEYLR 147
>UniRef50_Q3CJM0 Cluster: SNF2-related:Helicase, C-terminal:Type III
restriction enzyme, res subunit; n=1; Thermoanaerobacter
ethanolicus ATCC 33223|Rep: SNF2-related:Helicase,
C-terminal:Type III restriction enzyme, res subunit -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 894
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 331 FVNTDYKLKLECARITSDLLYKNKNEVAINRPKISSFKLQLNDVILDTIETIEYDLQNKV 510
F+N D K+++ A + D+ KN+ EV K S ++ D I DT + I YD K+
Sbjct: 765 FLNKDKKVRIASANLMWDIFLKNEKEVIFKGYK--SIDEKMYDFIHDTAKNIAYDYFEKI 822
>UniRef50_Q4KSV7 Cluster: ORF-123 peptide; n=2;
Nucleopolyhedrovirus|Rep: ORF-123 peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 132
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/97 (18%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +1
Query: 343 DYKLKLECARITSDLLYKNKNEVAINRPKISSFKLQLNDVILDTIETIEYDLQNKVLTIT 522
+Y + + +Y + N +N FK+++ +V + ET+E++ ++L +T
Sbjct: 34 EYLYSIRVEELEVRYVYWDDNARRMNLLSTGQFKIRIGNVYSEP-ETVEFNADEQLLKLT 92
Query: 523 APVQDQELRKSIIYFN---ILNSSDSWEVPKYMKNLF 624
+ ++ N ++ W+VP+++K +F
Sbjct: 93 VYSPQKNFNSITVHLNKRYFVDDRRPWQVPRWIKRVF 129
>UniRef50_Q2NFA5 Cluster: Member of asn/thr-rich large protein family;
n=2; Methanosphaera stadtmanae DSM 3091|Rep: Member of
asn/thr-rich large protein family - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 1896
Score = 34.7 bits (76), Expect = 2.0
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 271 NTPLDNFIVAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKN---KNEVAINRPKISSF 441
NTP N ++ N Y YF N Y+ L +TSD+ KN EV I P + +
Sbjct: 1028 NTPTINNVLYLTNNNYN-TYFTNNIYQFDLNTIVLTSDIYNKNMIFNKEVTIENP--NKY 1084
Query: 442 KLQLNDVILDTIETI 486
+ + L+ I TI
Sbjct: 1085 TIYNTTITLNKIATI 1099
>UniRef50_Q181Z3 Cluster: Putative multidrug efflux pump, outer
membrane protein precursor; n=2; Clostridium
difficile|Rep: Putative multidrug efflux pump, outer
membrane protein precursor - Clostridium difficile
(strain 630)
Length = 439
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 388 LYKNKNEVAINRPKISSFKLQLNDVILDTIETIEYDLQNKVLTITAPVQDQELRKSIIYF 567
L K KN + I +I KL+ + ++ ++ET +L+ + L T + QEL+ + YF
Sbjct: 145 LDKIKNNLEIKTKEIKDMKLKKDLGLVTSLETESAELELQTLQNTQKAKLQELKNNQDYF 204
Query: 568 NILNSSD 588
+L + D
Sbjct: 205 KLLTNID 211
>UniRef50_A0Q7S4 Cluster: Glutamine amidotransferase/asparagine
synthase; n=10; Francisella tularensis|Rep: Glutamine
amidotransferase/asparagine synthase - Francisella
tularensis subsp. novicida (strain U112)
Length = 630
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 316 YPMAYFVNTDYKLKL-ECARITSDLLYKNKNEVAINRPKI 432
Y AY + DYK++ RI DLLYK E +NRPK+
Sbjct: 520 YEFAYSLPIDYKIQQGNGKRILKDLLYKYVPESLVNRPKM 559
>UniRef50_Q7T6X5 Cluster: DNA-directed RNA polymerase subunit 1;
n=1; Acanthamoeba polyphaga mimivirus|Rep: DNA-directed
RNA polymerase subunit 1 - Mimivirus
Length = 1495
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 295 VAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVA 414
+ FV P + M Y + + L C R L+YKN+ E+A
Sbjct: 92 IKFVEPVFHMGYLIYLKHILSCICIRCNKLLVYKNEKEIA 131
>UniRef50_Q1LWB8 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 421
Score = 33.5 bits (73), Expect = 4.6
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 418 NRPKISSFKLQLNDV--ILDTIETIEYDLQNKVLTITAPVQDQELRKSIIYFNILNSSDS 591
N K S K + N + I+D ++ YDL+ KV + + ++L++++++ + S
Sbjct: 185 NIGKRSCSKAEENTIQSIVDLVDRAIYDLEGKVKWLDNYQKVKQLKETLVWLPVWESDKR 244
Query: 592 WEVPKYMKNLFDEMQLE 642
VP+ +K+L + LE
Sbjct: 245 AHVPESLKHLLKPVTLE 261
>UniRef50_Q8GCP3 Cluster: ICEF-IA ORF3; n=3; Mycoplasma
fermentans|Rep: ICEF-IA ORF3 - Mycoplasma fermentans
Length = 400
Score = 33.5 bits (73), Expect = 4.6
Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +1
Query: 304 VNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVAINRPKISSFKLQLNDVILDTIET 483
+N Y + D+K K++ + DL+ + K+E + K ++N+V+ +
Sbjct: 279 INKIETFLYKYDDDFKGKMDNYQKAFDLVMQLKDET-----NSTFLKKRINNVLRTEKDE 333
Query: 484 IEYDLQNKVLTITAPVQDQELRKS---IIYFNILNSSDSWEVPKYMKNLFDEMQLE 642
L NK++ ++ + KS + ++N+ + DSW + K +F+ ++
Sbjct: 334 FSRQLGNKIIKAILKSRNAKSAKSFTKLFFYNLNVNDDSWRLINRAKKIFEAQSIQ 389
>UniRef50_Q3LBK3 Cluster: AvgC homologue; n=1; Candidatus
Phytoplasma solani|Rep: AvgC homologue - Candidatus
Phytoplasma solani
Length = 260
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 430 ISSFKLQLNDVILDTIETIEYDLQNKVLTITAPVQDQELRKSIIYFNI 573
++ F Q + ++T TIE+D NK T+TA + + S+++ N+
Sbjct: 70 LNKFLKQAGSLTVNTDATIEFDTTNKKATLTAAQNSTKAQGSVVFTNV 117
>UniRef50_A3HUD3 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 353
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 316 YPMAYFVNTDYKLKLECARI-TSDLLYKNKNEVAINRPKISSFKLQLN-DVILDTIETIE 489
YP+ + N ++ KLE I TS Y + A+NR IS+F + + D +L+T+++I+
Sbjct: 292 YPVFSYTNENWVQKLEKKNIITSSFHYPTAKDPAVNRIIISAFHREDDIDYLLNTLQSIK 351
Query: 490 YD 495
+
Sbjct: 352 QE 353
>UniRef50_UPI000049A4FB Cluster: hypothetical protein 25.t00017;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 25.t00017 - Entamoeba histolytica HM-1:IMSS
Length = 983
Score = 32.7 bits (71), Expect = 8.1
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +1
Query: 268 LNTPLDNFIVAF-VNPTYPMAYFVNTDYKLKLECARITSDLLYKNK--------NEVAIN 420
+N + FI F +N T F + + K K E + +LLYKNK N + IN
Sbjct: 555 INLCIPEFIHFFSINVTQGHVQF-SFESKFKEELKDVKIELLYKNKIGDSSSNINNITIN 613
Query: 421 RPKISSFKLQLNDVILDTIETIEYDLQNKVLTITAPVQDQ 540
I LN V L T+ + L N L+IT P+ Q
Sbjct: 614 PHDIIRLDFDLNLVGLITLNQMNIYLSN-YLSITIPINQQ 652
>UniRef50_A6EPR1 Cluster: Putative uncharacterized protein; n=1;
unidentified eubacterium SCB49|Rep: Putative
uncharacterized protein - unidentified eubacterium SCB49
Length = 176
Score = 32.7 bits (71), Expect = 8.1
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 IVAFVNPTYPMAYFVNTDYKLKLECARITSDLLYKNKNEVAIN-RPKISSFKLQLNDVIL 468
+ AF+ ++ F + +K+E IT D + + + R K S K ND+ L
Sbjct: 37 LYAFIGKKISVSEFDPNENNIKIEIDSITGDTIQRVSYVMDKGFRNKYSLVKNVFNDLKL 96
Query: 469 DTIETIEYD 495
DTIE + YD
Sbjct: 97 DTIEFVAYD 105
>UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1015
Score = 32.7 bits (71), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 25 PTKKSGGHAMTLRERGVXXPPKKSEKLQQYKKAIAAEQTLRTTA 156
P KSG ++ E V PP S K Q++ + I + +T++TT+
Sbjct: 729 PPTKSGLDVISTEETAVIEPPSTSVKHQEFDQKIPSAETVQTTS 772
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,788,731
Number of Sequences: 1657284
Number of extensions: 11343966
Number of successful extensions: 26736
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26720
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -